Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- peroxisome 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 32.71 | 38.89 |
| Os04t0167875-00 | Rice | nucleus, peroxisome, plastid | 30.84 | 38.37 |
| HORVU7Hr1G008370.1 | Barley | cytosol, peroxisome | 37.38 | 38.1 |
| Solyc03g006960.2.1 | Tomato | nucleus | 91.59 | 26.06 |
| PGSC0003DMT400094534 | Potato | cytosol | 37.38 | 20.0 |
| PGSC0003DMT400090149 | Potato | cytosol | 57.01 | 18.37 |
| GSMUA_Achr8P14370_001 | Banana | cytosol | 50.47 | 18.37 |
| GSMUA_Achr11P... | Banana | cytosol | 42.99 | 18.18 |
| PGSC0003DMT400091100 | Potato | cytosol, nucleus, plastid | 46.73 | 14.62 |
| CDY38877 | Canola | cytosol | 48.6 | 12.81 |
| PGSC0003DMT400069947 | Potato | cytosol | 49.53 | 12.68 |
| Bra029160.1-P | Field mustard | cytosol | 48.6 | 12.44 |
| PGSC0003DMT400043146 | Potato | nucleus | 47.66 | 12.44 |
| AT5G51760.1 | Thale cress | cytosol | 47.66 | 12.26 |
| TraesCS2A01G000400.1 | Wheat | cytosol, nucleus, peroxisome, plastid | 48.6 | 11.95 |
| PGSC0003DMT400077989 | Potato | cytosol | 44.86 | 11.71 |
| TraesCS2D01G000300.1 | Wheat | cytosol | 49.53 | 11.67 |
| PGSC0003DMT400023517 | Potato | nucleus | 42.99 | 11.53 |
| HORVU2Hr1G000090.2 | Barley | cytosol | 47.66 | 11.23 |
| GSMUA_Achr11P... | Banana | cytosol | 42.06 | 11.11 |
| TraesCS2B01G023600.1 | Wheat | cytosol | 47.66 | 11.09 |
| TraesCS7D01G042300.1 | Wheat | cytosol | 36.45 | 10.54 |
| Zm00001d025055_P001 | Maize | cytosol | 44.86 | 10.34 |
| CDY32620 | Canola | cytosol | 37.38 | 10.23 |
| EES11811 | Sorghum | plastid | 46.73 | 10.22 |
| HORVU7Hr1G008470.2 | Barley | cytosol | 35.51 | 10.22 |
| TraesCS7D01G042600.1 | Wheat | cytosol | 32.71 | 10.2 |
| TraesCS7A01G048200.1 | Wheat | plastid | 33.64 | 9.84 |
| PGSC0003DMT400050448 | Potato | cytosol | 36.45 | 9.8 |
| TraesCS4A01G443500.1 | Wheat | mitochondrion | 32.71 | 9.54 |
| TraesCS4A01G443400.1 | Wheat | mitochondrion | 32.71 | 9.54 |
| Zm00001d004357_P001 | Maize | nucleus | 42.06 | 8.27 |
| PGSC0003DMT400046382 | Potato | cytosol | 42.06 | 8.27 |
| PGSC0003DMT400006608 | Potato | plastid | 39.25 | 7.71 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 36.45 | 7.28 |
| PGSC0003DMT400057134 | Potato | mitochondrion | 18.69 | 6.85 |
| PGSC0003DMT400078131 | Potato | golgi, vacuole | 19.63 | 6.71 |
| HORVU7Hr1G008520.2 | Barley | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G008550.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU7Hr1G008560.2 | Barley | mitochondrion | 0.0 | 0.0 |
| PGSC0003DMT400049695 | Potato | extracellular | 0.0 | 0.0 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | Gene3D:3.60.40.10 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004722 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | InterPro:IPR001932 | InterPro:IPR036457 | UniProt:M1AC88 | PFAM:PF00481 |
| EnsemblPlantsGene:PGSC0003DMG400007561 | PGSC:PGSC0003DMG400007561 | EnsemblPlants:PGSC0003DMT400019552 | InterPro:PP2C | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF537 | SUPFAM:SSF81606 | UniParc:UPI000295CFEF | SEG:seg |
Description
Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400007561]
Coordinates
chr3:+:41219598..41221134
Molecular Weight (calculated)
11541.6 Da
IEP (calculated)
5.147
GRAVY (calculated)
-0.165
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSEPEMTFT KREAEDECLI LASDGLWDVI SSDIACAVGR ECLRHRDPAG DLSSRPSSVE GDSRGAMFSS RRACSAAALL TRLALGRNSC DNISVIVVDL
101: KRNHTAV
101: KRNHTAV
001: MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG EETEDEPLYG IVSVMGRSRK MEDSVTVKPN
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ
Arabidopsis Description
AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.