Factsheet for PGSC0003DMT400077989

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g076400.2.1	Tomato	nucleus	95.12	95.12
VIT_06s0004g05460.t01	Wine grape	nucleus	60.98	63.61
GSMUA_AchrUn_...	Banana	cytosol	41.22	59.72
PGSC0003DMT400069947	Potato	cytosol	58.29	57.18
KXG35986	Sorghum	cytosol, peroxisome, plastid	28.29	57.14
PGSC0003DMT400043146	Potato	nucleus	54.88	54.88
TraesCS5A01G183600.1	Wheat	peroxisome	44.63	52.44
TraesCS5B01G182000.1	Wheat	peroxisome	44.39	52.15
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	44.39	52.0
GSMUA_Achr6P15180_001	Banana	cytosol	46.83	51.89
TraesCS5D01G188600.1	Wheat	peroxisome	44.15	51.86
GSMUA_Achr5P29000_001	Banana	cytosol	48.29	51.83
GSMUA_Achr11P...	Banana	cytosol	49.51	51.39
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	44.63	51.12
EER96576	Sorghum	cytosol	44.15	50.7
HORVU3Hr1G085930.3	Barley	nucleus, plastid	47.56	49.62
TraesCS3D01G355900.1	Wheat	plastid	47.32	48.87
TraesCS3A01G362200.1	Wheat	nucleus, plastid	46.59	48.85
HORVU4Hr1G060370.1	Barley	nucleus	47.32	48.5
Os09t0325700-01	Rice	cytosol	42.2	48.32
TraesCS4B01G210100.1	Wheat	nucleus	47.32	47.78
Zm00001d028574_P001	Maize	nucleus	45.85	47.47
TraesCS4D01G210900.1	Wheat	nucleus	47.32	47.32
Os03t0268600-01	Rice	nucleus	46.59	47.28
TraesCS4A01G094300.1	Wheat	nucleus	47.07	47.19
PGSC0003DMT400094534	Potato	cytosol	22.93	47.0
EER92493	Sorghum	nucleus	45.37	46.38
EES01744	Sorghum	plastid	46.34	46.12
Zm00001d012401_P001	Maize	cytosol, mitochondrion, nucleus, plastid	46.34	46.0
Zm00001d042886_P001	Maize	nucleus	45.61	45.83
Os01t0846300-01	Rice	cytosol, mitochondrion, nucleus, plastid	46.1	45.65
TraesCS3B01G394600.3	Wheat	plastid	47.56	45.56
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	11.71	44.86
PGSC0003DMT400091100	Potato	cytosol, nucleus, plastid	35.12	42.11
PGSC0003DMT400090149	Potato	cytosol	32.93	40.66
KXG22152	Sorghum	nucleus	44.63	39.44
PGSC0003DMT400023517	Potato	nucleus	37.07	38.1
PGSC0003DMT400021210	Potato	cytosol, nucleus, peroxisome	7.8	35.56
PGSC0003DMT400050448	Potato	cytosol	33.17	34.17
PGSC0003DMT400075333	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	37.32	28.54
PGSC0003DMT400006608	Potato	plastid	36.1	27.16
PGSC0003DMT400046382	Potato	cytosol	35.85	27.02
PGSC0003DMT400078131	Potato	golgi, vacuole	19.02	24.92
PGSC0003DMT400057134	Potato	mitochondrion	14.15	19.86
PGSC0003DMT400049695	Potato	extracellular	3.17	11.82

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	EntrezGene:102601835	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	UniProt:M1CZ65	PFAM:PF00481
EnsemblPlantsGene:PGSC0003DMG400030332	PGSC:PGSC0003DMG400030332	EnsemblPlants:PGSC0003DMT400077989	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf
InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF518	SMART:SM00332
SUPFAM:SSF81606	UniParc:UPI0002961290	RefSeq:XP_006350789.1	SEG:seg	:	:

Description

Protein phosphatase 2C [Source:PGSC_GENE;Acc:PGSC0003DMG400030332]

Coordinates

chr6:+:56814529..56816918

Molecular Weight (calculated)

44697.8 Da

IEP (calculated)

5.030

GRAVY (calculated)

-0.339

Length

410 amino acids

Sequence
(BLAST)

001: MAEVCFGVVA ETDSSSPCES SSRAVRRRRM ELRKIKVIAG VTQPGTENGI KRPKLKLISG SVSRICDNAV ESSSTDDDEE QLRLVETKGS PPTIILTPFL
101: GPSNSTLLVQ AVAYPKFGFA SVCGRRRDME DAVAIHPSFC QMEQGNSGEL HYFAVYDGHG CSHVATKCKE RLHELVKEEL ENKEGDHEEW EHSMNRSFNR
201: MDKEVIEWNN SVTGATCRCE LHTPECDAVG STAVVAVVTP DKIIVANCGD SRAILCRNGK AIPLSNDQKP DRPDELNRIQ EAGGRVIYWD GPRVSGVLAM
301: SRAIGDNYLK PYVICEPEVT VTDRTAEDDC LILASDGLWD VVSNDTACGV AGMCLKRNAS PASTSGNGAD GEMNSDQCCS DASMLLTKLA LARRSYDNVS
401: VVVIDLKHYT

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.