Factsheet for PGSC0003DMT400091100

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g006930.1.1	Tomato	cytosol	79.24	81.87
PGSC0003DMT400090149	Potato	cytosol	48.83	50.3
GSMUA_Achr11P...	Banana	cytosol	35.38	47.83
PGSC0003DMT400019552	Potato	cytosol, peroxisome, plastid	14.62	46.73
GSMUA_Achr8P14370_001	Banana	cytosol	39.47	45.92
PGSC0003DMT400094534	Potato	cytosol	25.44	43.5
VIT_16s0022g02210.t01	Wine grape	nucleus	43.86	40.11
HORVU7Hr1G008520.2	Barley	cytosol	18.71	38.55
PGSC0003DMT400021210	Potato	cytosol, nucleus, peroxisome	9.94	37.78
TraesCS7D01G042600.1	Wheat	cytosol	37.43	37.32
HORVU7Hr1G008470.2	Barley	cytosol	40.06	36.83
TraesCS7D01G042300.1	Wheat	cytosol	39.18	36.22
HORVU7Hr1G008370.1	Barley	cytosol, peroxisome	11.11	36.19
TraesCS4A01G443500.1	Wheat	mitochondrion	37.72	35.15
TraesCS4A01G443400.1	Wheat	mitochondrion	37.72	35.15
PGSC0003DMT400043146	Potato	nucleus	42.11	35.12
PGSC0003DMT400077989	Potato	cytosol	42.11	35.12
Os04t0167875-00	Rice	nucleus, peroxisome, plastid	8.77	34.88
GSMUA_Achr11P...	Banana	cytosol	41.23	34.81
TraesCS7A01G048200.1	Wheat	plastid	37.13	34.7
PGSC0003DMT400069947	Potato	cytosol	42.4	34.69
TraesCS2A01G000400.1	Wheat	cytosol, nucleus, peroxisome, plastid	42.69	33.56
TraesCS2B01G023600.1	Wheat	cytosol	44.74	33.26
TraesCS2D01G000300.1	Wheat	cytosol	44.15	33.26
HORVU2Hr1G000090.2	Barley	cytosol	43.86	33.04
Zm00001d025055_P001	Maize	cytosol	44.74	32.97
HORVU7Hr1G008550.1	Barley	cytosol	21.34	32.3
HORVU7Hr1G008560.2	Barley	mitochondrion	22.81	32.1
EES11811	Sorghum	plastid	45.32	31.7
PGSC0003DMT400023517	Potato	nucleus	36.26	31.08
PGSC0003DMT400050448	Potato	cytosol	34.5	29.65
Zm00001d004357_P001	Maize	nucleus	42.4	26.65
PGSC0003DMT400006608	Potato	plastid	38.6	24.22
PGSC0003DMT400075333	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	37.43	23.88
PGSC0003DMT400046382	Potato	cytosol	35.67	22.43
PGSC0003DMT400078131	Potato	golgi, vacuole	20.18	22.04
PGSC0003DMT400057134	Potato	mitochondrion	15.5	18.15
PGSC0003DMT400049695	Potato	extracellular	2.34	7.27

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
InterPro:IPR001932	InterPro:IPR036457	UniProt:M1DLW0	PFAM:PF00481	EnsemblPlantsGene:PGSC0003DMG400040671	PGSC:PGSC0003DMG400040671
EnsemblPlants:PGSC0003DMT400091100	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF537	SMART:SM00332	SUPFAM:SSF81606	UniParc:UPI000296A7AD
SEG:seg	:	:	:	:	:

Description

Protein phosphatase 2c [Source:PGSC_GENE;Acc:PGSC0003DMG400040671]

Coordinates

chr3:+:41273967..41278371

Molecular Weight (calculated)

38364.2 Da

IEP (calculated)

9.040

GRAVY (calculated)

-0.359

Length

342 amino acids

Sequence
(BLAST)

001: MENKGNVDQN EEGRMHRQYR IQLRRREQAR EAQMRVGVLP PPAVGSKSVK GMRPSMEDEV SIHPNLCSPL INGGRPLHFY AVYDGHGGPQ VSALCRERMH
101: LIVAEELMRP ENNTKMMSSG SSSSSDRRQQ RDWEAAWMRI LQRSFQRMDK MICFNCDCAT LSYRCLCPPN HNLRFMGSTA IIAIVTDHAI VIANCGDSRA
201: VLSRNGNALS VSFDHKPNRR DELARIKAAG GKLVYSRGLR VQGFLAMSRA IGDSYLKPYV ISEPEFTFVK RKVNDECLIL ASDGLWDVVS NETACRMARV
301: CLQGDAIFFS HSETAAALLT RIATGRNSHD NVSVIVVDFT RN

Best Arabidopsis Sequence Match ( AT5G51760.2 )
(BLAST)

001: MRRQAAVFGE PSSSRNRDRT DMEVYSSFDV PLRKQARRSE IGGLPADIGG FLAPPAASSC QKSEAPVWKG EETEDEPLYG IVSVMGRSRK MEDSVTVKPN
101: LCKPEVNRQR PVHFFAVYDG HGGSQVSTLC STTMHTFVKE ELEQNLEEEE EGSENDVVER KWRGVMKRSF KRMDEMATST CVCGTSVPLC NCDPREAAIS
201: GSTAVTAVLT HDHIIVANTG DSRAVLCRNG MAIPLSNDHK PDRPDERARI EAAGGRVLVV DGARVEGILA TSRAIGDRYL KPMVAWEPEV TFMRRESGDE
301: CLVLASDGLW DVLSSQLACD IARFCLREET PSSLDLNRMA QEDDNDGEQN PSRSVLAATL LTRLALGRQS SDNISVVVID LKNSSQ

Arabidopsis Description

AHG1Probable protein phosphatase 2C 75 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.