Factsheet for Bra025048.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002038.1-P
Bra016034.1-P
Bra034845.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G45860.1	Bra016034.1-P	AT1G72770.1	19407142
AT5G45870.1	Bra016034.1-P	AT1G72770.1	19407142
AT5G45870.1	Bra002038.1-P	AT3G11410.1	19407142
AT5G45870.1	Bra034845.1-P	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68675	Canola	cytosol	92.35	96.91
CDY58053	Canola	cytosol	92.35	96.91
AT5G45860.1	Thale cress	cytosol	78.82	83.23
AT5G45870.1	Thale cress	cytosol	74.71	79.87
Bra013334.1-P	Field mustard	cytosol	58.82	60.24
Bra028758.1-P	Field mustard	cytosol	50.0	51.52
KRH21267	Soybean	cytosol	55.88	51.35
KRH11022	Soybean	cytosol	55.88	51.35
GSMUA_Achr4P10630_001	Banana	mitochondrion	47.65	50.31
Bra017012.1-P	Field mustard	cytosol	53.53	44.39
Bra017125.1-P	Field mustard	plastid	52.94	44.12
Bra000052.1-P	Field mustard	plastid	52.94	43.48
Bra005115.1-P	Field mustard	plastid	37.06	42.28
Bra000184.1-P	Field mustard	cytosol, mitochondrion	52.35	41.98
Bra004967.1-P	Field mustard	mitochondrion	52.35	41.98
Bra033267.1-P	Field mustard	cytosol	45.29	41.4
Bra005853.1-P	Field mustard	cytosol	49.41	41.38
Bra012635.1-P	Field mustard	cytosol	45.88	40.84
Bra013262.1-P	Field mustard	cytosol	45.29	40.31
Bra026299.1-P	Field mustard	cytosol	43.53	40.22
Bra009113.1-P	Field mustard	cytosol	48.24	40.2
Bra003077.1-P	Field mustard	cytosol	42.35	39.13
Bra007772.1-P	Field mustard	cytosol	42.94	38.83
PGSC0003DMT400026521	Potato	cytosol	43.53	38.74
Bra029093.1-P	Field mustard	cytosol	41.18	38.04
GSMUA_Achr4P15170_001	Banana	cytosol	55.88	38.0
Bra003463.1-P	Field mustard	cytosol	41.76	37.97
Bra000938.1-P	Field mustard	cytosol	42.94	37.82
Bra022634.1-P	Field mustard	cytosol	41.76	37.77
Bra024995.1-P	Field mustard	nucleus	46.47	37.62
Bra021032.1-P	Field mustard	cytosol	34.12	36.94
Bra017526.1-P	Field mustard	nucleus	38.24	35.52
Solyc02g076770.1.1	Tomato	cytosol	42.94	33.49
Bra008064.1-P	Field mustard	plastid	37.65	31.22

Protein Annotations

EnsemblPlants:Bra025048.1	EnsemblPlants:Bra025048.1-P	EnsemblPlantsGene:Bra025048	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF8	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000253FBEC	UniProt:M4E8E2	MapMan:11.1.2.1.1.1	:	:	:

Description

AT5G45860 (E=5e-063) | Bet v I allergen family protein

Coordinates

chrA06:+:24877608..24878120

Molecular Weight (calculated)

18747.0 Da

IEP (calculated)

5.022

GRAVY (calculated)

-0.310

Length

170 amino acids

Sequence
(BLAST)

001: MKTSQQQHRC GSTLVQTINA PLPLVWSILR RFDYPQAYKQ FVKTCDLSSG DGGEGSVRDV TVVSGLPAGY SIERLDELDD ESHVMAISII GGDHRLLNYR
101: SKTTAFVAAE EEEKTVVVES YMVDVPKGNS VEETTSFADT IVGFNLKSLA KLSENIWHPS ENRSSKICSS

Best Arabidopsis Sequence Match ( AT5G45860.1 )
(BLAST)

001: METSQKYHTC GSTLVQTIDA PLSLVWSILR RFDNPQAYKQ FVKTCNLSSG DGGEGSVREV TVVSGLPAEF SRERLDELDD ESHVMMISII GGDHRLVNYR
101: SKTMAFVAAD TEEKTVVVES YVVDVPEGNS EEETTSFADT IVGFNLKSLA KLSERVAHLK L

Arabidopsis Description

PYL11Abscisic acid receptor PYL11 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ50]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.