Factsheet for Bra007772.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002038.1-P
Bra016034.1-P
Bra034845.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G26040.1	Bra016034.1-P	AT1G72770.1	19407142
AT2G26040.1	Bra002038.1-P	AT3G11410.1	19407142
AT2G26040.1	Bra034845.1-P	AT3G11410.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11503	Canola	cytosol	100.0	100.0
CDX76731	Canola	cytosol	97.34	97.34
AT2G26040.1	Thale cress	cytosol	88.3	87.37
Solyc08g065410.1.1	Tomato	cytosol	56.91	73.29
KRH61500	Soybean	cytosol	71.28	70.9
KRH52194	Soybean	cytosol	70.21	70.59
VIT_04s0008g00890.t01	Wine grape	cytosol	68.09	69.19
Solyc12g095970.1.1	Tomato	cytosol	69.68	68.95
PGSC0003DMT400075340	Potato	cytosol	69.15	68.42
KRH05492	Soybean	cytosol	67.55	67.55
PGSC0003DMT400077008	Potato	cytosol	67.02	67.02
GSMUA_Achr7P09320_001	Banana	cytosol	64.89	65.59
GSMUA_Achr10P...	Banana	cytosol	65.96	62.94
GSMUA_Achr6P00980_001	Banana	cytosol	64.89	62.56
KRH15519	Soybean	cytosol	69.68	62.38
Zm00001d016294_P001	Maize	cytosol	62.23	62.23
EES06532	Sorghum	cytosol	64.89	59.8
TraesCS3A01G154400.1	Wheat	cytosol	62.23	59.39
TraesCS7D01G364600.1	Wheat	cytosol	61.7	58.88
TraesCS3D01G161500.1	Wheat	cytosol, nucleus, plastid	62.77	58.71
HORVU7Hr1G088140.2	Barley	cytosol	61.17	58.67
TraesCS7B01G269600.1	Wheat	cytosol	61.17	58.38
TraesCS7A01G358200.1	Wheat	cytosol	60.64	58.16
EER88529	Sorghum	cytosol	61.7	56.86
Os02t0226801-00	Rice	cytosol	62.23	55.71
Os06t0562200-01	Rice	cytosol	61.17	55.56
HORVU3Hr1G030210.5	Barley	plastid	32.98	53.45
Bra013262.1-P	Field mustard	cytosol	53.72	52.88
Bra012635.1-P	Field mustard	cytosol	53.72	52.88
Bra008064.1-P	Field mustard	plastid	57.45	52.68
Bra028758.1-P	Field mustard	cytosol	45.74	52.12
HORVU4Hr1G060110.1	Barley	mitochondrion	27.13	52.04
Bra021032.1-P	Field mustard	cytosol	42.55	50.96
HORVU3Hr1G040680.1	Barley	plastid	30.32	49.57
HORVU4Hr1G060100.1	Barley	mitochondrion	25.53	48.98
Bra024995.1-P	Field mustard	nucleus	53.19	47.62
Bra017526.1-P	Field mustard	nucleus	43.62	44.81
Bra013334.1-P	Field mustard	cytosol	39.36	44.58
Bra017125.1-P	Field mustard	plastid	47.34	43.63
Bra005115.1-P	Field mustard	plastid	34.57	43.62
Bra000052.1-P	Field mustard	plastid	47.34	43.0
Bra025048.1-P	Field mustard	cytosol	38.83	42.94
Bra029093.1-P	Field mustard	cytosol	41.49	42.39
Bra017012.1-P	Field mustard	cytosol	45.74	41.95
Bra009113.1-P	Field mustard	cytosol	45.21	41.67
Bra022634.1-P	Field mustard	cytosol	41.49	41.49
Bra026299.1-P	Field mustard	cytosol	40.43	41.3
Bra003077.1-P	Field mustard	cytosol	40.43	41.3
Bra003463.1-P	Field mustard	cytosol	40.43	40.64
Bra005853.1-P	Field mustard	cytosol	43.62	40.39
Bra004967.1-P	Field mustard	mitochondrion	45.21	40.09
Bra033267.1-P	Field mustard	cytosol	39.36	39.78
Bra000184.1-P	Field mustard	cytosol, mitochondrion	44.68	39.62
Bra000938.1-P	Field mustard	cytosol	38.83	37.82
HORVU3Hr1G107030.1	Barley	mitochondrion	33.51	21.8

Protein Annotations

MapMan:11.1.2.1.1.1	Gene3D:3.30.530.20	EnsemblPlantsGene:Bra007772	EnsemblPlants:Bra007772.1	EnsemblPlants:Bra007772.1-P	GO:GO:0003674
GO:GO:0004864	GO:GO:0004871	GO:GO:0004872	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719	GO:GO:0009738
GO:GO:0009987	GO:GO:0019538	GO:GO:0030234	GO:GO:0032515	GO:GO:0038023	GO:GO:0042802
GO:GO:0042803	GO:GO:0043086	InterPro:IPR023393	UniProt:M4CU78	PFAM:PF10604	PANTHER:PTHR31213
PANTHER:PTHR31213:SF7	InterPro:Polyketide_cyclase/dehydratase	SUPFAM:SSF55961	InterPro:START-like_dom_sf	UniParc:UPI0002542C31	SEG:seg

Description

AT2G26040 (E=3e-086) | Bet v I allergen family protein

Coordinates

chrA09:+:30813410..30813976

Molecular Weight (calculated)

20835.5 Da

IEP (calculated)

5.585

GRAVY (calculated)

-0.298

Length

188 amino acids

Sequence
(BLAST)

001: MSSSPVVKGL TDEEHKTLEP VINTYHQFEP DPTTCTSLVA QRIDAPASVV WPLIRSFDNP QRYKHFVKSC RRVSGDGGVG SVREVTVISG IPASTSTERL
101: EFLDDDHRVL SFRVVGGEHR LNNYKSVTSV NEFLNQDSGR VYTVVLESYT VDVPEGNTVE DTRMFVDTVV KLNLQKLGVI ATAAPTHD

Best Arabidopsis Sequence Match ( AT2G26040.1 )
(BLAST)

001: MSSSPAVKGL TDEEQKTLEP VIKTYHQFEP DPTTCTSLIT QRIHAPASVV WPLIRRFDNP ERYKHFVKRC RLISGDGDVG SVREVTVISG LPASTSTERL
101: EFVDDDHRVL SFRVVGGEHR LKNYKSVTSV NEFLNQDSGK VYTVVLESYT VDIPEGNTEE DTKMFVDTVV KLNLQKLGVA ATSAPMHDDE

Arabidopsis Description

PYL2Abscisic acid receptor PYL2 [Source:UniProtKB/Swiss-Prot;Acc:O80992]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.