Factsheet for GSMUA_Achr10P00270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 2
plastid 4
cytosol 2
peroxisome 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus, peroxisome, plasma membrane, plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr1P19740_001
GSMUA_Achr3P26270_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P15180_001
GSMUA_Achr7P24000_001
GSMUA_Achr8P05700_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G38310.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G38310.1	GSMUA_Achr11P...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT3G11410.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT3G11410.1	19407142
AT2G38310.1	GSMUA_Achr11P...	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr5P29000_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_Achr6P15180_001	AT5G59220.1	19407142
AT2G38310.1	GSMUA_AchrUn_...	AT5G59220.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT2G40330.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469
AT2G40330.1	GSMUA_Achr1P19740_001	AT2G20000.1	17944809
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19407142
AT5G05440.1	GSMUA_Achr3P26270_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr7P24000_001	AT1G72770.1	19624469
AT5G05440.1	GSMUA_Achr8P05700_001	AT1G72770.1	19624469

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P04600_001	Banana	cytosol	58.08	80.42
GSMUA_AchrUn_...	Banana	plastid	57.58	72.15
GSMUA_Achr8P21220_001	Banana	cytosol	58.59	68.24
GSMUA_Achr9P17980_001	Banana	cytosol	50.51	67.11
GSMUA_Achr11P...	Banana	cytosol, plastid	50.0	62.66
GSMUA_Achr5P29490_001	Banana	plastid	49.49	60.49
Solyc05g052420.1.1	Tomato	cytosol	24.75	59.76
GSMUA_Achr6P32790_001	Banana	cytosol	59.6	55.92
TraesCS4A01G114400.1	Wheat	cytosol	48.48	53.63
Os03t0297600-01	Rice	cytosol	58.59	50.66
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	55.05	49.55
Zm00001d047705_P001	Maize	plastid	54.55	49.54
EER92405	Sorghum	plastid	54.55	48.65
KRH00319	Soybean	cytosol	43.43	48.59
HORVU4Hr1G055220.1	Barley	cytosol	54.55	48.21
TraesCS4B01G189800.1	Wheat	cytosol	54.55	48.21
TraesCS4D01G191200.1	Wheat	cytosol	54.55	48.21
TraesCS2D01G087500.1	Wheat	plastid	52.02	48.13
TraesCS2B01G105300.1	Wheat	plastid	51.52	47.0
KRH49452	Soybean	plastid	41.92	46.63
Bra028758.1-P	Field mustard	cytosol	38.38	46.06
KRH73249	Soybean	plastid	45.45	43.27
KRH76014	Soybean	cytosol	46.97	43.06
Bra000052.1-P	Field mustard	plastid	44.44	42.51
CDY07739	Canola	plastid	44.44	42.51
Solyc03g095780.1.1	Tomato	plastid	42.93	42.29
Bra017125.1-P	Field mustard	plastid	43.43	42.16
CDY54415	Canola	cytosol	43.43	42.16
CDY18391	Canola	plastid	43.43	42.16
VIT_13s0067g01940.t01	Wine grape	plastid	44.95	41.98
PGSC0003DMT400028658	Potato	nucleus	44.95	41.78
PGSC0003DMT400041080	Potato	mitochondrion	43.43	41.55
CDY14471	Canola	plastid	43.43	41.55
Solyc10g076410.1.1	Tomato	plastid	42.42	41.38
Solyc10g085310.1.1	Tomato	plastid	44.44	41.31
Solyc09g015380.1.1	Tomato	plastid	41.92	41.29
AT2G38310.1	Thale cress	plastid	42.93	41.06
GSMUA_Achr4P10630_001	Banana	mitochondrion	33.33	40.99
VIT_08s0058g00470.t01	Wine grape	plastid	46.97	40.97
KRH14908	Soybean	plastid	44.95	40.83
PGSC0003DMT400053120	Potato	cytosol, plastid	41.41	40.8
PGSC0003DMT400053119	Potato	cytosol, plastid	41.41	40.8
PGSC0003DMT400053102	Potato	cytosol, plastid	41.41	40.8
CDX98844	Canola	cytosol	41.92	40.69
CDY04951	Canola	cytosol	40.4	40.61
CDX91449	Canola	plastid	42.42	40.58
AT5G05440.1	Thale cress	cytosol	41.41	40.39
CDY54453	Canola	plastid	42.42	40.38
Bra009113.1-P	Field mustard	cytosol	41.41	40.2
CDX70150	Canola	cytosol	41.41	40.2
PGSC0003DMT400075056	Potato	plastid	42.93	39.72
Bra005853.1-P	Field mustard	cytosol	40.4	39.41
CDX80959	Canola	cytosol	40.4	39.41
CDY72318	Canola	cytosol	40.4	39.41
PGSC0003DMT400061535	Potato	plastid	42.42	38.53
PGSC0003DMT400069734	Potato	mitochondrion, plastid	40.4	38.46
CDX93191	Canola	cytosol	39.39	38.42
CDY52923	Canola	cytosol	39.39	38.05
Bra017012.1-P	Field mustard	cytosol	39.39	38.05
GSMUA_Achr2P19970_001	Banana	cytosol	34.85	37.1
AT2G40330.1	Thale cress	cytosol	39.9	36.74
GSMUA_AchrUn_...	Banana	cytosol	34.34	36.56
GSMUA_Achr10P...	Banana	cytosol	34.34	36.56
CDX74796	Canola	cytosol, nucleus, plastid	38.89	36.32
TraesCS2A01G089400.1	Wheat	plastid	52.02	36.01
CDY07608	Canola	cytosol, mitochondrion	38.38	35.85
Bra000184.1-P	Field mustard	cytosol, mitochondrion	38.38	35.85
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	38.38	35.85
GSMUA_Achr10P...	Banana	cytosol	33.33	35.48
Bra004967.1-P	Field mustard	mitochondrion	37.88	35.38
CDY24911	Canola	cytosol, mitochondrion	37.88	35.21
GSMUA_Achr4P19170_001	Banana	cytosol	33.33	34.02
GSMUA_Achr4P08490_001	Banana	cytosol	33.84	33.67
Bra005115.1-P	Field mustard	plastid	25.25	33.56
GSMUA_Achr6P00980_001	Banana	cytosol	32.83	33.33
KRH31193	Soybean	cytosol, golgi, plastid	42.93	33.07
GSMUA_Achr7P09320_001	Banana	cytosol	30.81	32.8
GSMUA_Achr3P03480_001	Banana	cytosol	33.84	32.52
GSMUA_Achr8P14780_001	Banana	cytosol	33.33	32.04
Solyc06g050500.2.1	Tomato	plastid	43.94	31.64
GSMUA_Achr4P15170_001	Banana	cytosol	39.39	31.2
GSMUA_Achr10P...	Banana	cytosol	30.81	30.96
GSMUA_Achr8P19910_001	Banana	mitochondrion	32.32	30.62
GSMUA_Achr4P15670_001	Banana	cytosol	28.79	30.48
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	32.83	28.51

Protein Annotations

EnsemblPlants:GSMUA_Achr10P00270_001	EnsemblPlants:GSMUA_Achr10T00270_001	EnsemblPlantsGene:GSMUA_Achr10G00270_001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF3	PFAM:PF10604	SEG:seg	SUPFAM:SSF55961
UniParc:UPI000294A864	UniProt:M0RE54	MapMan:11.1.2.1.1.1	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G00270_001]

Coordinates

chr10:-:765205..765936

Molecular Weight (calculated)

20425.2 Da

IEP (calculated)

5.956

GRAVY (calculated)

0.207

Length

198 amino acids

Sequence
(BLAST)

001: MACVPAAASY VPHQRATAGV GGGAVMAGER CTAAHEVLEA VAGHYENPAG EMCAAHDVQE AVARHHDHAV GPNQCCSAVV QAVAAPVAAV WSVRLEILDD
101: ESHVLSFRVV GGEHRLANYC SVTTLHPVVG GSAGGGCTLV VESYVVDVPP GNTTEETRVF VDTIVKCNLQ SLARIAEALV RQSTAVAGIE AGVRRANP

Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)

001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ

Arabidopsis Description

PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.