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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 6
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0004g05460.t01
VIT_09s0002g01850.t01
VIT_13s0019g02200.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38310.1 VIT_09s0002g01850.t01 AT1G72770.1 19407142
AT2G38310.1 VIT_09s0002g01850.t01 AT1G72770.1 19624469
AT2G38310.1 VIT_13s0019g02200.t01 AT3G11410.1 19407142
AT2G38310.1 VIT_06s0004g05460.t01 AT5G59220.1 19407142
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g015380.1.1 Tomato plastid 64.76 73.13
VIT_13s0067g01940.t01 Wine grape plastid 67.84 72.64
PGSC0003DMT400028658 Potato nucleus 67.4 71.83
Solyc10g085310.1.1 Tomato plastid 66.96 71.36
PGSC0003DMT400075056 Potato plastid 66.96 71.03
KRH76014 Soybean cytosol 64.32 67.59
Solyc10g076410.1.1 Tomato plastid 59.91 67.0
PGSC0003DMT400041080 Potato mitochondrion 60.79 66.67
TraesCS4A01G114400.1 Wheat cytosol 52.42 66.48
AT2G38310.1 Thale cress plastid 60.35 66.18
Bra017125.1-P Field mustard plastid 59.03 65.69
CDY18391 Canola plastid 59.03 65.69
CDY54415 Canola cytosol 59.03 65.69
CDX91449 Canola plastid 59.47 65.22
CDY54453 Canola plastid 58.59 63.94
Bra000052.1-P Field mustard plastid 58.15 63.77
CDY07739 Canola plastid 58.15 63.77
Bra005115.1-P Field mustard plastid 41.85 63.76
CDY14471 Canola plastid 57.27 62.8
GSMUA_Achr9P04600_001 Banana cytosol 39.21 62.24
GSMUA_Achr6P32790_001 Banana cytosol 56.39 60.66
Zm00001d038436_P001 Maize plastid 53.3 60.5
TraesCS2D01G087500.1 Wheat plastid 56.39 59.81
TraesCS1B01G306800.1 Wheat mitochondrion 51.1 59.79
GSMUA_AchrUn_... Banana plastid 41.41 59.49
TraesCS2B01G105300.1 Wheat plastid 56.39 58.99
TraesCS1A01G297600.1 Wheat mitochondrion 51.98 58.71
GSMUA_Achr5P29490_001 Banana plastid 41.85 58.64
GSMUA_Achr9P17980_001 Banana cytosol 38.33 58.39
TraesCS1D01G293600.1 Wheat mitochondrion, plastid 51.54 58.21
HORVU1Hr1G070420.1 Barley mitochondrion 51.54 58.21
HORVU3Hr1G088100.1 Barley plastid 51.98 57.28
HORVU3Hr1G039010.1 Barley plastid 51.98 57.28
TraesCS3B01G380300.1 Wheat mitochondrion, plastid 51.98 57.0
GSMUA_Achr11P... Banana cytosol, plastid 39.65 56.96
EES19683 Sorghum plastid 54.19 56.94
Zm00001d047705_P001 Maize plastid 54.63 56.88
TraesCS3A01G348400.1 Wheat plastid 51.54 56.8
TraesCS3D01G342000.1 Wheat plastid 51.54 56.8
TraesCS4D01G191200.1 Wheat cytosol 55.95 56.7
TraesCS4B01G189800.1 Wheat cytosol 55.95 56.7
HORVU4Hr1G055220.1 Barley cytosol 55.51 56.25
EER92405 Sorghum plastid 54.63 55.86
Os05t0473000-01 Rice cytosol 53.3 55.76
Os03t0297600-01 Rice cytosol 55.95 55.46
Zm00001d028793_P001 Maize cytosol, mitochondrion, plastid 53.3 55.0
Zm00001d043014_P001 Maize cytosol 50.66 53.99
GSMUA_Achr8P21220_001 Banana cytosol 40.09 53.53
VIT_04s0008g00890.t01 Wine grape cytosol 42.29 51.89
VIT_16s0050g02620.t01 Wine grape cytosol 41.85 51.35
VIT_02s0025g01340.t01 Wine grape cytosol 39.21 48.11
GSMUA_Achr10P... Banana cytosol, plastid 40.97 46.97
VIT_15s0046g01050.t01 Wine grape cytosol 38.33 45.31
TraesCS2A01G089400.1 Wheat plastid 56.39 44.76
Os01t0827800-00 Rice plastid 50.22 44.53
VIT_02s0012g01270.t01 Wine grape cytosol 48.46 41.67
OQU87775 Sorghum endoplasmic reticulum, extracellular 48.02 40.07
Zm00001d012475_P001 Maize cytosol 49.78 36.22
VIT_08s0058g00230.t01 Wine grape plastid 28.63 20.19
VIT_04s0008g00270.t01 Wine grape cytosol 25.55 20.0
VIT_13s0175g00110.t01 Wine grape plastid 5.29 11.32
Protein Annotations
EntrezGene:100267073wikigene:100267073MapMan:11.1.2.1.1.1Gene3D:3.30.530.20ProteinID:CCB44816ProteinID:CCB44816.1
UniProt:F6GXT6EMBL:FN594967InterPro:IPR023393EntrezGene:LOC100267073wikigene:LOC100267073PFAM:PF10604
PANTHER:PTHR31213PANTHER:PTHR31213:SF48InterPro:Polyketide_cyclase/dehydrataseSUPFAM:SSF55961InterPro:START-like_dom_sfUniParc:UPI0001983D22
ArrayExpress:VIT_08s0058g00470EnsemblPlantsGene:VIT_08s0058g00470EnsemblPlants:VIT_08s0058g00470.t01RefSeq:XP_002264158RefSeq:XP_002264158.1SEG:seg
Description
No Description!
Coordinates
chr8:+:9468378..9469243
Molecular Weight (calculated)
24315.6 Da
IEP (calculated)
8.174
GRAVY (calculated)
-0.236
Length
227 amino acids
Sequence
(BLAST)
001: MPSNPPKSSL VVHRINSPNS ITTATTASAA ANNHNTSTMP PHKQVQKRSP LTSATQVPDA VSRHHTHVVG PNQCCSAVVQ QIAAPVSTVW SVVRRFDNPQ
101: AYKHFVKSCH VVVGDGDVGT LREVHVISGL PAANSTERLE ILDDERHVLS FSVIGGDHRL SNYRSVTTLH PSPSSTGTVV LESYVVDIPP GNTKEDTCVF
201: VDTIVRCNLQ SLAQIAENAA GCKRSSS
Best Arabidopsis Sequence Match ( AT2G38310.1 )
(BLAST)
001: MLAVHRPSSA VSDGDSVQIP MMIASFQKRF PSLSRDSTAA RFHTHEVGPN QCCSAVIQEI SAPISTVWSV VRRFDNPQAY KHFLKSCSVI GGDGDNVGSL
101: RQVHVVSGLP AASSTERLDI LDDERHVISF SVVGGDHRLS NYRSVTTLHP SPISGTVVVE SYVVDVPPGN TKEETCDFVD VIVRCNLQSL AKIAENTAAE
201: SKKKMSL
Arabidopsis Description
PYL4Abscisic acid receptor PYL4 [Source:UniProtKB/Swiss-Prot;Acc:O80920]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.