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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
Os01t0583100-01
Os01t0846300-01
Os03t0268600-01
Os05t0537400-00
Os05t0592800-02
Os06t0531000-00
Os06t0622500-00
Os09t0325700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38310.1 Os01t0583100-01 AT1G72770.1 19407142
AT2G38310.1 Os05t0537400-00 AT1G72770.1 19407142
AT2G38310.1 Os05t0592800-02 AT1G72770.1 19407142
AT2G38310.1 Os01t0583100-01 AT1G72770.1 19624469
AT2G38310.1 Os05t0537400-00 AT1G72770.1 19624469
AT2G38310.1 Os05t0592800-02 AT1G72770.1 19624469
AT2G38310.1 Os01t0846300-01 AT3G11410.1 19407142
AT2G38310.1 Os03t0268600-01 AT3G11410.1 19407142
AT2G38310.1 Os09t0325700-01 AT3G11410.1 19407142
AT2G38310.1 Os06t0531000-00 AT4G18340.1 19407142
AT2G38310.1 Os01t0846300-01 AT5G59220.1 19407142
AT2G38310.1 Os03t0268600-01 AT5G59220.1 19407142
AT2G38310.1 Os09t0325700-01 AT5G59220.1 19407142
AT2G40330.1 Os01t0583100-01 AT1G72770.1 19407142
AT2G40330.1 Os05t0537400-00 AT1G72770.1 19407142
AT2G40330.1 Os05t0592800-02 AT1G72770.1 19407142
AT2G40330.1 Os01t0583100-01 AT1G72770.1 19624469
AT2G40330.1 Os05t0537400-00 AT1G72770.1 19624469
AT2G40330.1 Os05t0592800-02 AT1G72770.1 19624469
AT2G40330.1 Os06t0622500-00 AT2G20000.1 17944809
AT5G05440.1 Os01t0583100-01 AT1G72770.1 19407142
AT5G05440.1 Os05t0537400-00 AT1G72770.1 19407142
AT5G05440.1 Os05t0592800-02 AT1G72770.1 19407142
AT5G05440.1 Os01t0583100-01 AT1G72770.1 19624469
AT5G05440.1 Os05t0537400-00 AT1G72770.1 19624469
AT5G05440.1 Os05t0592800-02 AT1G72770.1 19624469
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038436_P001 Maize plastid 81.11 88.0
TraesCS1B01G306800.1 Wheat mitochondrion 78.34 87.63
TraesCS1A01G297600.1 Wheat mitochondrion 81.11 87.56
HORVU1Hr1G070420.1 Barley mitochondrion 81.11 87.56
TraesCS1D01G293600.1 Wheat mitochondrion, plastid 79.72 86.07
EES19683 Sorghum plastid 83.87 84.26
Zm00001d043014_P001 Maize cytosol 64.52 65.73
Os03t0297600-01 Rice cytosol 67.28 63.76
Os01t0827800-00 Rice plastid 74.65 63.28
Bra028758.1-P Field mustard cytosol 47.93 63.03
KRH00319 Soybean cytosol 51.15 62.71
GSMUA_Achr11P... Banana cytosol, plastid 45.62 62.66
KRH49452 Soybean plastid 51.15 62.36
GSMUA_Achr5P29490_001 Banana plastid 46.54 62.35
Bra017125.1-P Field mustard plastid 53.92 57.35
CDY54415 Canola cytosol 53.92 57.35
CDY18391 Canola plastid 53.92 57.35
Solyc05g052420.1.1 Tomato cytosol 21.66 57.32
KRH73249 Soybean plastid 54.38 56.73
Solyc03g095780.1.1 Tomato plastid 52.53 56.72
PGSC0003DMT400053120 Potato cytosol, plastid 52.07 56.22
PGSC0003DMT400053119 Potato cytosol, plastid 52.07 56.22
PGSC0003DMT400053102 Potato cytosol, plastid 52.07 56.22
CDX93191 Canola cytosol 52.53 56.16
CDY07739 Canola plastid 53.46 56.04
CDY14471 Canola plastid 53.46 56.04
Bra000052.1-P Field mustard plastid 53.46 56.04
CDX91449 Canola plastid 53.46 56.04
CDY54453 Canola plastid 53.46 55.77
Bra005115.1-P Field mustard plastid 38.25 55.7
Solyc10g076410.1.1 Tomato plastid 52.07 55.66
VIT_13s0067g01940.t01 Wine grape plastid 54.38 55.66
CDY52923 Canola cytosol 52.53 55.61
Bra017012.1-P Field mustard cytosol 52.53 55.61
AT2G38310.1 Thale cress plastid 53.0 55.56
Solyc10g085310.1.1 Tomato plastid 53.92 54.93
KRH76014 Soybean cytosol 54.38 54.63
CDY04951 Canola cytosol 49.31 54.31
Solyc09g015380.1.1 Tomato plastid 50.23 54.23
PGSC0003DMT400041080 Potato mitochondrion 51.61 54.11
PGSC0003DMT400028658 Potato nucleus 53.0 53.99
PGSC0003DMT400069734 Potato mitochondrion, plastid 51.61 53.85
PGSC0003DMT400061535 Potato plastid 53.92 53.67
CDX98844 Canola cytosol 50.23 53.43
VIT_08s0058g00470.t01 Wine grape plastid 55.76 53.3
KRH14908 Soybean plastid 53.46 53.21
AT5G05440.1 Thale cress cytosol 49.77 53.2
CDX70150 Canola cytosol 49.77 52.94
Bra009113.1-P Field mustard cytosol 49.77 52.94
CDX74796 Canola cytosol, nucleus, plastid 51.61 52.83
PGSC0003DMT400075056 Potato plastid 52.07 52.8
Bra004967.1-P Field mustard mitochondrion 50.69 51.89
CDY18867 Canola cytosol, mitochondrion, nucleus, plastid 50.69 51.89
Bra005853.1-P Field mustard cytosol 48.39 51.72
CDY72318 Canola cytosol 48.39 51.72
CDX80959 Canola cytosol 47.93 51.23
CDY24911 Canola cytosol, mitochondrion 50.23 51.17
AT2G40330.1 Thale cress cytosol 50.69 51.16
Bra000184.1-P Field mustard cytosol, mitochondrion 49.77 50.94
CDY07608 Canola cytosol, mitochondrion 49.77 50.94
OQU87775 Sorghum endoplasmic reticulum, extracellular 63.59 50.74
Os06t0562200-01 Rice cytosol 47.47 49.76
Os02t0255300-00 Rice cytosol, plastid 39.63 47.78
Os02t0226801-00 Rice cytosol 45.16 46.67
Os10t0573400-01 Rice plasma membrane 44.24 45.28
Zm00001d012475_P001 Maize cytosol 64.06 44.55
Os02t0255500-01 Rice cytosol 41.47 44.12
Solyc06g050500.2.1 Tomato plastid 55.76 44.0
KRH31193 Soybean cytosol, golgi, plastid 52.07 43.97
Os05t0213500-01 Rice cytosol, nucleus 40.55 42.11
Os06t0528300-00 Rice cytosol 35.48 37.38
Os06t0526400-00 Rice cytosol 33.64 37.24
Os06t0527800-01 Rice cytosol 35.02 36.89
Os06t0526466-00 Rice cytosol, mitochondrion 11.52 18.12
Protein Annotations
EnsemblPlants:Os05t0473000-01EnsemblPlantsGene:Os05g0473000EntrezGene:4339083Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sfPANTHER:PTHR31213PANTHER:PTHR31213:SF21PFAM:PF10604ProteinID:BAS94505.1RefSeq:XP_015638073.1
SEG:segSUPFAM:SSF55961UniParc:UPI0001C7C4DAUniProt:A0A0N7KKY4MapMan:11.1.2.1.1.1:
Description
PYRABACTIN RESISTANCE 1 LIKE/REGULATORY COMPONENTS OF ABA RECEPTOR 6, pyrabactin resistance-like 6Streptomyces cyclase/dehydrase family protein. (Os05t0473000-01)
Coordinates
chr5:-:23239204..23240669
Molecular Weight (calculated)
22723.0 Da
IEP (calculated)
8.159
GRAVY (calculated)
0.013
Length
217 amino acids
Sequence
(BLAST)
001: MMPYTAPRPS PPQHSRIGGC GGGGVLKAAG AAGHAASCVA VPAEVARHHE HAAGVGQCCS AVVQAIAAPV DAVWSVVRRF DRPQAYKHFI RSCRLLDGDG
101: DGGAVAVGSV REVRVVSGLP ATSSRERLEI LDDERRVLSF RVVGGEHRLS NYRSVTTVHE TAAGAAAAVV VESYVVDVPH GNTADETRMF VDTIVRCNLQ
201: SLARTAEQLA LAAPRAA
Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)
001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
Arabidopsis Description
PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.