Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- peroxisome 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80307 | Canola | nucleus, plastid | 96.2 | 95.96 |
| Bra002594.1-P | Field mustard | plastid | 99.24 | 95.15 |
| AT5G59220.1 | Thale cress | nucleus | 83.8 | 80.15 |
| CDY18067 | Canola | cytosol | 10.13 | 67.8 |
| VIT_06s0004g05460.t01 | Wine grape | nucleus | 58.99 | 59.29 |
| CDY40181 | Canola | cytosol | 53.42 | 57.65 |
| CDY45436 | Canola | cytosol | 52.91 | 57.1 |
| GSMUA_AchrUn_... | Banana | cytosol | 40.0 | 55.83 |
| KXG35986 | Sorghum | cytosol, peroxisome, plastid | 27.85 | 54.19 |
| CDY06705 | Canola | nucleus | 53.16 | 53.85 |
| CDY67257 | Canola | nucleus | 50.13 | 53.37 |
| CDY67227 | Canola | cytosol | 49.87 | 53.1 |
| Solyc06g076400.2.1 | Tomato | nucleus | 54.68 | 52.68 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 48.86 | 52.16 |
| CDY10275 | Canola | nucleus | 55.44 | 50.93 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 44.56 | 50.29 |
| EER96576 | Sorghum | cytosol | 45.32 | 50.14 |
| CDY08530 | Canola | nucleus | 49.87 | 50.13 |
| CDY01017 | Canola | nucleus | 49.62 | 49.87 |
| TraesCS5A01G183600.1 | Wheat | peroxisome | 43.8 | 49.57 |
| GSMUA_Achr11P... | Banana | cytosol | 49.37 | 49.37 |
| CDY06259 | Canola | nucleus | 54.43 | 49.31 |
| TraesCS5D01G188600.1 | Wheat | peroxisome | 43.29 | 49.0 |
| TraesCS5B01G182000.1 | Wheat | peroxisome | 43.04 | 48.71 |
| TraesCS4B01G210100.1 | Wheat | nucleus | 49.62 | 48.28 |
| Os09t0325700-01 | Rice | cytosol | 43.54 | 48.04 |
| Os03t0268600-01 | Rice | nucleus | 49.11 | 48.02 |
| HORVU4Hr1G060370.1 | Barley | nucleus | 48.61 | 48.0 |
| GSMUA_Achr5P29000_001 | Banana | cytosol | 46.33 | 47.91 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 43.04 | 47.49 |
| TraesCS4D01G210900.1 | Wheat | nucleus | 48.61 | 46.83 |
| Zm00001d028574_P001 | Maize | nucleus | 46.58 | 46.46 |
| EER92493 | Sorghum | nucleus | 47.09 | 46.38 |
| TraesCS4A01G094300.1 | Wheat | nucleus | 47.85 | 46.21 |
| TraesCS3D01G355900.1 | Wheat | plastid | 46.08 | 45.84 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 45.57 | 45.8 |
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 45.32 | 45.78 |
| EES01744 | Sorghum | plastid | 46.58 | 44.66 |
| Zm00001d042886_P001 | Maize | nucleus | 46.08 | 44.61 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 46.58 | 44.55 |
| Os01t0846300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 45.82 | 43.72 |
| TraesCS3B01G394600.3 | Wheat | plastid | 46.08 | 42.52 |
| KXG22152 | Sorghum | nucleus | 46.33 | 39.44 |
| CDY50002 | Canola | cytosol | 16.71 | 38.6 |
| CDY32620 | Canola | cytosol | 37.97 | 38.36 |
| CDY38877 | Canola | cytosol | 38.23 | 37.19 |
| CDY50003 | Canola | nucleus | 36.96 | 35.61 |
| CDY36606 | Canola | nucleus | 22.28 | 35.2 |
| CDX92752 | Canola | cytosol | 35.95 | 34.63 |
| CDY42756 | Canola | cytosol | 36.2 | 34.62 |
| CDX96761 | Canola | cytosol | 30.63 | 34.57 |
| CDX83901 | Canola | cytosol | 30.38 | 34.29 |
| CDX94382 | Canola | cytosol | 36.46 | 34.29 |
| CDX89368 | Canola | cytosol | 36.71 | 34.04 |
| CDY14318 | Canola | nucleus | 35.95 | 33.65 |
| CDY38260 | Canola | cytosol | 34.68 | 32.46 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 34.68 | 32.39 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 34.94 | 29.05 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 35.19 | 28.72 |
| CDY48313 | Canola | cytosol | 34.68 | 27.35 |
| CDY26234 | Canola | cytosol | 34.18 | 27.22 |
| PGSC0003DMT400049695 | Potato | extracellular | 2.53 | 9.09 |
| CDY53715 | Canola | plasma membrane, vacuole | 19.75 | 7.54 |
| CDX93912 | Canola | plasma membrane, vacuole | 19.75 | 7.53 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:A0A078H804 | UniProt:A0A078H804 |
| EnsemblPlants:CDY33008 | ProteinID:CDY33008 | ProteinID:CDY33008.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00053231001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF518 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0004EDB7EC | SEG:seg | : | : | : |
Description
BnaA10g12140DBnaA10g12140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H804]
Coordinates
chrLK032304:+:236112..238490
Molecular Weight (calculated)
43783.8 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.376
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEICYENES VITKTTSTVV TRTAATTTTK RRERSSSQAA RRRRMEIRRY KFVSGEQDPV FVDGELQRRG RRESTVIYEL AKTETAKEVV VLCESLSSTV
101: MALPDPDAYP KYGVASVCGR RREMEDAVAV HPFFYRQQTE FSSFGYHYCG VYDGHGCSHV AMRCRERLHE LVREELEADD SDWEKSMSRS FTRMDLEAVA
201: LNGGGTANCR CELQRPECDA VGSTAVVSIL TPEKIVVANC GDSRAVLCRN GKAIPLSSDH KPDRPDELDR IQAAGGRVIY WDGPRVLGVL AMSRAIGDNY
301: LKPYVISKPE VTVTDRVKQD EFLILASDGL WDVVSNETAC NVVRMCLKRK VNSQLTSSPE NDVAGAGNVV VVGGDVSNKA SDNVSVVVVD LRRDT
101: MALPDPDAYP KYGVASVCGR RREMEDAVAV HPFFYRQQTE FSSFGYHYCG VYDGHGCSHV AMRCRERLHE LVREELEADD SDWEKSMSRS FTRMDLEAVA
201: LNGGGTANCR CELQRPECDA VGSTAVVSIL TPEKIVVANC GDSRAVLCRN GKAIPLSSDH KPDRPDELDR IQAAGGRVIY WDGPRVLGVL AMSRAIGDNY
301: LKPYVISKPE VTVTDRVKQD EFLILASDGL WDVVSNETAC NVVRMCLKRK VNSQLTSSPE NDVAGAGNVV VVGGDVSNKA SDNVSVVVVD LRRDT
001: MAEICYENET MMIETTATVV KKATTTTRRR ERSSSQAARR RRMEIRRFKF VSGEQEPVFV DGDLQRRRRR ESTVAASTST VFYETAKEVV VLCESLSSTV
101: VALPDPEAYP KYGVASVCGR RREMEDAVAV HPFFSRHQTE YSSTGFHYCG VYDGHGCSHV AMKCRERLHE LVREEFEADA DWEKSMARSF TRMDMEVVAL
201: NADGAAKCRC ELQRPDCDAV GSTAVVSVLT PEKIIVANCG DSRAVLCRNG KAIALSSDHK PDRPDELDRI QAAGGRVIYW DGPRVLGVLA MSRAIGDNYL
301: KPYVISRPEV TVTDRANGDD FLILASDGLW DVVSNETACS VVRMCLRGKV NGQVSSSPER EMTGVGAGNV VVGGGDLPDK ACEEASLLLT RLALARQSSD
401: NVSVVVVDLR RDT
101: VALPDPEAYP KYGVASVCGR RREMEDAVAV HPFFSRHQTE YSSTGFHYCG VYDGHGCSHV AMKCRERLHE LVREEFEADA DWEKSMARSF TRMDMEVVAL
201: NADGAAKCRC ELQRPDCDAV GSTAVVSVLT PEKIIVANCG DSRAVLCRNG KAIALSSDHK PDRPDELDRI QAAGGRVIYW DGPRVLGVLA MSRAIGDNYL
301: KPYVISRPEV TVTDRANGDD FLILASDGLW DVVSNETACS VVRMCLRGKV NGQVSSSPER EMTGVGAGNV VVGGGDLPDK ACEEASLLLT RLALARQSSD
401: NVSVVVVDLR RDT
Arabidopsis Description
SAG113Probable protein phosphatase 2C 78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.