Factsheet for Os01t0756700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0210700-02
Os01t0648000-01
Os01t0756700-01
Os02t0245800-01
Os02t0689200-03
Os05t0428700-01
Os09t0548600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	Os01t0648000-01	AT2G26650.1	15299147
AT5G46240.1	Os05t0428700-01	AT4G22200.1	12034902
AT5G46240.1	Os05t0428700-01	AT4G22200.1	15299147
AT5G46240.1	Os05t0428700-01	AT4G22200.1	17085433
AT5G46240.1	Os02t0689200-03	AT5G41160.1	15299147
AT5G46240.1	Os09t0548600-00	AT5G41160.1	15299147
AT5G46240.1	Os01t0210700-02	AT5G46240.1	11042178
AT5G46240.1	Os01t0756700-01	AT5G46240.1	11042178
AT5G46240.1	Os02t0245800-01	AT5G46240.1	11042178
AT5G46240.1	Os01t0210700-02	AT5G46240.1	15299147
AT5G46240.1	Os01t0756700-01	AT5G46240.1	15299147
AT5G46240.1	Os02t0245800-01	AT5G46240.1	15299147
AT5G46240.1	Os01t0210700-02	AT5G46240.1	17085433
AT5G46240.1	Os01t0756700-01	AT5G46240.1	17085433
AT5G46240.1	Os02t0245800-01	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G294000.1	Wheat	mitochondrion, plasma membrane	81.27	81.27
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	80.88	81.2
TraesCS3B01G328800.1	Wheat	plasma membrane	81.67	81.19
EES01496	Sorghum	mitochondrion, plasma membrane	84.06	79.62
HORVU3Hr1G072850.15	Barley	plastid	76.1	74.61
Os01t0210700-02	Rice	extracellular	59.16	49.42
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	36.06	48.53
CDY03233	Canola	plasma membrane	62.75	48.02
Bra017567.1-P	Field mustard	plasma membrane	62.75	47.95
CDY35154	Canola	plasma membrane	62.75	47.95
AT5G46240.1	Thale cress	plasma membrane	63.94	47.42
CDX99479	Canola	plasma membrane	63.74	46.72
CDX78839	Canola	plasma membrane	63.15	46.34
CDY33464	Canola	cytosol, plasma membrane, plastid	61.35	46.25
Bra013296.1-P	Field mustard	plasma membrane	62.95	46.0
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	60.96	45.95
Os04t0117500-00	Rice	plasma membrane	26.1	45.8
CDY62359	Canola	cytosol, plasma membrane, plastid	60.76	45.8
Os02t0245800-01	Rice	plasma membrane	63.35	44.29
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	62.15	44.07
KRH44805	Soybean	plasma membrane	63.55	43.82
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	59.56	43.78
Solyc02g070530.2.1	Tomato	nucleus	58.57	42.73
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	58.57	42.67
PGSC0003DMT400054339	Potato	plasma membrane	57.97	42.3
CDX76529	Canola	plasma membrane	58.37	41.15
Bra021012.1-P	Field mustard	plasma membrane	58.17	41.01
KRH21063	Soybean	plasma membrane	63.35	40.93
KRH58233	Soybean	cytosol, extracellular, plasma membrane	17.93	40.54
KRH11194	Soybean	plasma membrane	62.55	40.41
VIT_10s0003g03270.t01	Wine grape	plasma membrane	63.55	40.33
Zm00001d012717_P002	Maize	plasma membrane	82.07	39.96
Solyc03g058900.1.1	Tomato	cytosol	14.94	38.46
Os06t0254200-00	Rice	plasma membrane, plastid	43.82	36.07
CDY34066	Canola	endoplasmic reticulum, plasma membrane	43.03	35.7
Os07t0175400-00	Rice	plastid	47.41	33.47
PGSC0003DMT400054318	Potato	nucleus	20.12	32.06
Os01t0648000-01	Rice	plasma membrane	56.97	30.59
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.74	25.61
Os06t0250600-01	Rice	cytosol	34.86	20.4
Os04t0445000-01	Rice	cytosol	16.93	18.72
Os05t0428700-01	Rice	cytosol, plastid	19.92	17.67

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	EntrezGene:4325143	EMBL:AK100739	ProteinID:BAD87503.1
ProteinID:BAF06204.1	ProteinID:BAS74411.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244
GO:GO:0005249	GO:GO:0005267	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887
GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0034220	GO:GO:0034765	GO:GO:0042391	GO:GO:0055085	GO:GO:0071805
InterPro:IPR000595	InterPro:IPR014710	InterPro:Ion_trans_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	EnsemblPlantsGene:Os01g0756700	EnsemblPlants:Os01t0756700-01
PFAM:PF00027	PFAM:PF00520	PRINTS:PR01463	PFscan:PS50042	PANTHER:PTHR10217	PANTHER:PTHR10217:SF619
UniProt:Q5JM04	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI00004C29C3	RefSeq:XP_015632943.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:

Description

SHAKER POTASSIUM CHANNEL 1Shaker potassium channel, Salinity stress tolerance, Ion homeostasis (Os01t0756700-01)

Coordinates

chr1:+:31761223..31763887

Molecular Weight (calculated)

58011.4 Da

IEP (calculated)

8.323

GRAVY (calculated)

0.041

Length

502 amino acids

Sequence
(BLAST)

001: MPRSSRMNLW PHCFPCFDDG DRSGNRFSTV CNFPDDLLPS LGATAHQPPK LRKYLVSPYD PRYKVWETFL IILVVYSAWI CPLEFAFLRY LPSAPFVVDD
101: VVNGFFAVDI MLTFFVPFVD KKSYLLVNDP KKIAVRYLSS WFVFDVCSTV PFHSISLLFN EHGHDLGFKF LNVLRLWRLR RVSSMFARLE KDIRFNYAVI
201: RCTKLISVTL FAIHCAGCIN YLIADRYPDP RRTWIGAVMP NFREDGLWIR YVTAMYWSIT TLTTTGYGDL HAENAREMLF GICYMLFNLW LTAYLIGNMT
301: NLVVHSTSRT RDFRDVVQAA SEFAARNQLP QQIEEQMLNH ICLRYKTDGL KQQETLDVLP KAMRSSISHY LFFRVVQGAY LFKGVSSRFI QQLVTEMQAE
401: YFAPKEDIIL QNDSPSDLYL LVSGAVDILV FLDGTEQVYR RAAEGELLGE IGVLCNKPQS FTFRTTKLSQ ILRISRTKLL GIIQENREDG DIIRSNLQQV
501: NV

Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)

001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN

Arabidopsis Description

KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.