Factsheet for Os06t0254200-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0547600-01
Os01t0648000-01
Os05t0428700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32650.1	Os01t0648000-01	AT2G26650.1	12678562
AT4G32650.1	Os01t0648000-01	AT2G26650.1	15299147
AT4G32650.1	Os05t0428700-01	AT4G22200.1	12678562
AT4G32650.1	Os01t0547600-01	AT5G14570.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0117500-00	Rice	plasma membrane	39.84	84.97
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	49.84	81.5
HORVU3Hr1G068040.1	Barley	plasma membrane	44.92	64.02
TraesCS3D01G246300.1	Wheat	plastid	59.02	60.5
TraesCS3A01G245200.1	Wheat	mitochondrion	57.38	58.24
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	58.85	56.09
OQU87429	Sorghum	mitochondrion	55.41	54.08
Zm00001d011729_P002	Maize	cytosol	54.92	52.92
GSMUA_Achr1P05260_001	Banana	plasma membrane	52.79	50.87
GSMUA_Achr5P09770_001	Banana	plasma membrane	53.11	49.62
Zm00001d016987_P001	Maize	plasma membrane	47.05	48.73
TraesCS3B01G274500.1	Wheat	plastid	51.48	48.53
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	47.21	47.92
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	48.85	47.23
PGSC0003DMT400065964	Potato	cytosol, plastid	48.52	46.91
Solyc01g010080.2.1	Tomato	plastid	48.03	46.66
PGSC0003DMT400037608	Potato	plastid	47.21	46.23
Solyc08g068000.1.1	Tomato	plasma membrane	47.54	45.1
KRH61886	Soybean	plasma membrane	46.07	44.96
Bra037049.1-P	Field mustard	plastid	47.38	44.81
Bra011367.1-P	Field mustard	plastid	47.38	44.39
CDX68872	Canola	plastid	47.38	44.39
CDX75267	Canola	plastid	47.38	44.39
CDY13496	Canola	plastid	47.54	44.21
Os01t0756700-01	Rice	plasma membrane	36.07	43.82
AT4G32650.1	Thale cress	plastid	47.21	43.5
CDX72366	Canola	plastid	44.59	42.17
KRH52547	Soybean	cytosol	40.49	41.58
Os01t0210700-02	Rice	extracellular	38.03	38.6
Os02t0245800-01	Rice	plasma membrane	42.79	36.35
Os01t0648000-01	Rice	plasma membrane	43.28	28.24
Os07t0175400-00	Rice	plastid	31.97	27.43
Os06t0250600-01	Rice	cytosol	30.16	21.45
Os05t0428700-01	Rice	cytosol, plastid	18.69	20.14
CDY61287	Canola	plasma membrane	15.41	17.74
Os04t0445000-01	Rice	cytosol	12.46	16.74
Bra021279.1-P	Field mustard	nucleus	13.77	14.69
CDY10020	Canola	cytosol	6.72	12.02

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	UniProt:A0A0P0WV47	ProteinID:BAS97078.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005216	GO:GO:0005244	GO:GO:0005249	GO:GO:0005267	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0034765
GO:GO:0042391	GO:GO:0055085	GO:GO:0071805	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	EnsemblPlantsGene:Os06g0254200	EnsemblPlants:Os06t0254200-00	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217
PANTHER:PTHR10217:SF537	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI000043A20F	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:

Description

Similar to Potassium channel protein NKT5. (Os06t0254200-00)

Coordinates

chr6:+:7982027..7983859

Molecular Weight (calculated)

69357.3 Da

IEP (calculated)

9.108

GRAVY (calculated)

0.149

Length

610 amino acids

Sequence
(BLAST)

001: MTRQGSTSVT ILPVTMSPAM AARSELLRPA FGEASPSLGR FVINPHSCSY RWWHMFLIML VLYSAWASPF ELSMEKAASI ALVVTDLVVD VFFAIDIALS
101: FFVAYRDTST GLLITDRRKI TMRYLKRPCF ALDVASTIPL QIIYQLVTGK RQGLWGLLNL LRLWRLRRVS KLFARVEKDI RFNYLWTRLI KLLCVTLFAL
201: HFAACIYLWM AFNYKIKELT WIGSQIHSFE DRSVWFCYTC AVYWSITTLA TVGYGDLHAT NIGEMLFSIA FMLFNMGLTS YIIGNITNLV VRETSNTFKM
301: RDMVQRVSEF GRMNRLPEAM REQMLASVQL RFRTDEQLQQ EMLSELPKAV RSGVMKHMFK SAIESCYLFQ GVSDSLIVQL VAEMKAEFFP PKANVILENE
401: TSTDCYIIIS GEVEALTTLA DGTEKHVKRI GPRGMAGEIG VMFSIPQPFT IRSRRLTQVV RISHIHLLQA VRPNTADGYI VFSNFIQYLE SLKVQTKDVA
501: FVSDHLWNGN SMVLRRATEV AVDESKEAAH KMLPCKEPKR VVIHEQLPNA TSTALHPSPG KLVLLPDSMQ ELMKLSEKKF GKAVRGILTV EGAEVEDIEV
601: IRDGDHLLFS

Best Arabidopsis Sequence Match ( AT4G32650.1 )
(BLAST)

001: MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS
101: AWASLFELAF EKAAEGALLT IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY KTITGDVGRG QAFGFLNLLR
201: LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS
301: REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE QMLAHMQLKF KTAELRQEEV LQDLPKAIRS SINQHLFRSI
401: IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT RRLSQVIRIG
501: HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA QVQETVQSEE TPQSNDEEIV TVSRHENGQI EERRREGVPK RVIIHGQAPP
601: NQDNKNNGDS NGRLIILPDS IQLLFDLAEK KLGKRGSTIA MADGAHVEQI DALRENDHLY IF

Arabidopsis Description

KAT3KC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UVX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.