Factsheet for Os01t0547600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0718700-00
Os04t0117500-00
Os06t0254200-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14570.1	Os01t0718700-00	AT4G32650.1	15299147
AT5G14570.1	Os04t0117500-00	AT4G32650.1	15299147
AT5G14570.1	Os06t0254200-00	AT4G32650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G420900.1	Wheat	golgi, peroxisome, plasma membrane	83.3	83.64
HORVU7Hr1G098550.3	Barley	plasma membrane	83.09	83.44
TraesCS7B01G328700.1	Wheat	golgi, peroxisome, plasma membrane	83.51	83.33
OQU87011	Sorghum	plasma membrane	80.62	80.79
Zm00001d044504_P001	Maize	plasma membrane	79.79	79.79
Zm00001d025783_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid, vacuole	30.72	77.2
TraesCS7A01G428500.1	Wheat	golgi, peroxisome, plasma membrane	74.23	76.92
Zm00001d016468_P001	Maize	plasma membrane	30.52	69.16
GSMUA_Achr1P25450_001	Banana	plasma membrane	53.2	55.48
VIT_14s0066g00850.t01	Wine grape	plasma membrane	46.39	49.45
PGSC0003DMT400017804	Potato	plasma membrane	42.47	48.58
Solyc02g067790.2.1	Tomato	golgi, peroxisome, plasma membrane	45.36	47.83
CDX85593	Canola	golgi, peroxisome, plasma membrane, plastid	46.19	46.28
Bra023475.1-P	Field mustard	plastid	45.98	46.07
AT5G14570.1	Thale cress	plastid	46.19	45.44
CDX91044	Canola	golgi, peroxisome, plasma membrane, plastid	45.77	44.22
Os01t0704100-02	Rice	plasma membrane	43.09	40.5
Os02t0112600-01	Rice	golgi, plasma membrane, plastid	40.0	36.4
Os02t0112100-01	Rice	golgi, plasma membrane, plastid	40.0	36.4

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:107277478	MapMan:24.2.2.10	MapMan:25.1.3.1	UniProt:A2ZU80	EMBL:AP004231
EMBL:AP008207	EMBL:AP014957	ProteinID:EAZ12277.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009705	GO:GO:0009987	GO:GO:0015112	GO:GO:0015706
GO:GO:0016020	GO:GO:0016021	GO:GO:0042128	GO:GO:0055085	GO:GO:0071249	InterPro:MFS
InterPro:MFS_trans_sf	EnsemblPlantsGene:Os01g0547600	EnsemblPlants:Os01t0547600-01	PFAM:PF07690	PANTHER:PTHR23515	PANTHER:PTHR23515:SF5
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0001C7E980	RefSeq:XP_015636108.1	SEG:seg	:

Description

HIGH AFFINITY NITRATE TRANSPORTERHigh-affinity nitrate transporter, Nitrate transport, Auxin signaling (Os01t0547600-01)

Coordinates

chr1:-:20385993..20388511

Molecular Weight (calculated)

50202.2 Da

IEP (calculated)

8.068

GRAVY (calculated)

0.565

Length

485 amino acids

Sequence
(BLAST)

001: MVAMEKKTKL VEEEDGCYYY DYGGYGDGVV DDEGRATELR PMALSRPHTQ AFHLAWMSLF ACFFAAFAAP PILPAMRPAL VLAPSDASAA AVASLSATLV
101: GRLAMGPACD LLGPRRASGV ASLVCALALA LAAVFASSPA GFVALRFVAG LSLANFVANQ HWMSRIFAPS AVGLANAVAA GWANVGSAAA QVVMPVAYDA
201: VVLRLGVPVT VAWRVTYLLP CAMLVTTGLA VLAFPYDLPG GGGGRCPGGG GGRRRSFWAV VRGGVGDYRA WLLGLTYGHC YGVELIMENV AADFFRRRFR
301: LPMEAAGAAA ACFGAMNAVA RPAGGVASDE VARRFGMRGR LWALWAVQSA GAALCVLVGR MGAAEAPSLA ATVAVMVACA AFVQAASGLT FGIVPFVCKR
401: SLGVVSGMTA SGGAVGAIVT NRLFFSGSRY TVEEAISCTG ITSLLCTLPV ALIHFRRQGG MFCGPSATID GDGDVDDDDD YMLLK

Best Arabidopsis Sequence Match ( AT5G14570.1 )
(BLAST)

001: MEPSQRNTKP PSFSDSTIPV DSDGRATVFR PFSLSSPHSR AFHLAWLSLF SCFFSTFSIP PLVPVISSDL NLSASTVSAA GIASFAGSIF SRLAMGPLCD
101: LIGPRTSSAI LSFLTAPVIL SASLVSSPTS FILVRFFVGF SLANFVANQY WMSSMFSGNV IGLANGVSAG WANVGAGISQ LLMPLIYSTI AEFLPRAVAW
201: RVSFVFPAIF QVTTAVLVLL YGQDTPHGNR KNSNQNKLTI PEEEEVLVVE EDERSSFVEI LIGGLGNYRA WILALLYGYS YGVELTTDNV IAGYFYERFG
301: VNLEAAGTIA ASFGISNIAS RPAGGMISDA LGKRFGMRGR LWGLWIVQSV AGLLCVLLGR VNSLWGSILV MWVFSVFVQA ASGLVFGVVP FVSTRSLGVV
401: AGITGSGGTV GAVVTQFLLF SGDDVRKQRS ISLMGLMTFV FALSVTSIYF PQWGGMCCGP SSSSEEEDIS RGLLVEDEDE EGKVVSGSLR PVC

Arabidopsis Description

NRT2.7NRT2.7 [Source:UniProtKB/TrEMBL;Acc:A0A178UKX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.