Factsheet for TraesCS7A01G428500.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	golgi, peroxisome, plasma membrane
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G245200.1
TraesCS3B01G274500.1
TraesCS3D01G246300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14570.1	TraesCS3A01G245200.1	AT4G32650.1	15299147
AT5G14570.1	TraesCS3B01G274500.1	AT4G32650.1	15299147
AT5G14570.1	TraesCS3D01G246300.1	AT4G32650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G420900.1	Wheat	golgi, peroxisome, plasma membrane	86.75	84.06
TraesCS7B01G328700.1	Wheat	golgi, peroxisome, plasma membrane	86.97	83.74
HORVU7Hr1G098550.3	Barley	plasma membrane	85.26	82.61
Zm00001d025783_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid, vacuole	31.84	77.2
Os01t0547600-01	Rice	plasma membrane	76.92	74.23
Zm00001d016468_P001	Maize	plasma membrane	32.91	71.96
OQU87011	Sorghum	plasma membrane	74.36	71.9
Zm00001d044504_P001	Maize	plasma membrane	73.72	71.13
GSMUA_Achr1P25450_001	Banana	plasma membrane	50.64	50.97
VIT_14s0066g00850.t01	Wine grape	plasma membrane	43.16	44.4
PGSC0003DMT400017804	Potato	plasma membrane	39.53	43.63
Solyc02g067790.2.1	Tomato	golgi, peroxisome, plasma membrane	42.73	43.48
AT5G14570.1	Thale cress	plastid	43.59	41.38
CDX85593	Canola	golgi, peroxisome, plasma membrane, plastid	42.73	41.32
Bra023475.1-P	Field mustard	plastid	42.52	41.12
CDX91044	Canola	golgi, peroxisome, plasma membrane, plastid	42.95	40.04
TraesCS3A01G254000.1	Wheat	plasma membrane	41.45	37.74
TraesCS6A01G031000.1	Wheat	plasma membrane	36.32	33.53
TraesCS6A01G031100.1	Wheat	plastid	36.32	33.53
TraesCS6A01G030800.1	Wheat	plasma membrane	36.32	33.53
TraesCS6A01G030700.1	Wheat	plastid	36.32	33.53
TraesCS2A01G074800.1	Wheat	plasma membrane	35.9	33.47
TraesCS6A01G030900.1	Wheat	plasma membrane	36.11	33.33
TraesCS6A01G032400.1	Wheat	plastid	36.11	33.27
TraesCS6A01G032500.1	Wheat	plastid	35.68	32.87
TraesCS6A01G031200.1	Wheat	plasma membrane	35.47	32.61
TraesCS6A01G032900.1	Wheat	golgi, plasma membrane, vacuole	35.26	32.42
TraesCS6A01G033200.1	Wheat	plasma membrane	35.04	32.28
TraesCS6A01G033000.1	Wheat	plasma membrane	34.83	32.02
TraesCS6A01G032800.1	Wheat	plasma membrane	34.62	31.95
TraesCS6A01G033100.1	Wheat	plasma membrane	34.62	31.89

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0008150
GO:GO:0009705	GO:GO:0015112	GO:GO:0015706	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:MFS	InterPro:MFS_trans_sf	PFAM:PF07690	PANTHER:PTHR23515	PANTHER:PTHR23515:SF5	SUPFAM:SSF103473
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G428500	EnsemblPlants:TraesCS7A01G428500.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7A:+:621911086..621913601

Molecular Weight (calculated)

49052.2 Da

IEP (calculated)

9.947

GRAVY (calculated)

0.462

Length

468 amino acids

Sequence
(BLAST)

001: MVTMGKKVDQ EQSYYNDWAH IDHGVDADGR ATELRPLALS RPHTQAFHLA WLSLFACFFA AFAAPPILPA LRPALVLAPS DASAAAVASL SAALVGRLAM
101: GAACDLLGPR RASGVASLVC ALALALAAVY ASSPAGFVAL RFCAGLSLSN FVANQHWMSR IFAPSGVGLA NAVAAGWANV GSAAAQVVMP LAYDLIVLRL
201: GVPITVAWRV AYLIPCAMLI TTGLAVLAFP YDLPSGCAYA GGGKGAKGEG FWKVVRGGVC DYRAWVLALT YGYCYGVELI MENVAADFFR RRFRLPMEAA
301: GAAAACFGVM NTVARPAGGV ASDVVGRRFG MRGRLWALWA VQSTGAVLCV LVGRMGATEA PSLAATMAVM VACGAFVQAA SGLTFGIVPF VSKRSMGVVS
401: GMTASGRRGC RRDRDKPVVL QQLQVHGGGG HLIHWPHQPP LHAPCGAHLF PTLGRDALRP LGNRHRRP

Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)

001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV

Arabidopsis Description

NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.