Factsheet for Bra023475.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra011367.1-P
Bra037049.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14570.1	Bra011367.1-P	AT4G32650.1	15299147
AT5G14570.1	Bra037049.1-P	AT4G32650.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85593	Canola	golgi, peroxisome, plasma membrane, plastid	98.55	98.55
AT5G14570.1	Thale cress	plastid	84.09	82.56
PGSC0003DMT400017804	Potato	plasma membrane	54.96	62.74
VIT_14s0066g00850.t01	Wine grape	plasma membrane	58.06	61.76
Solyc02g067790.2.1	Tomato	golgi, peroxisome, plasma membrane	58.26	61.3
GSMUA_Achr1P25450_001	Banana	plasma membrane	52.89	55.05
HORVU7Hr1G098550.3	Barley	plasma membrane	46.07	46.17
Os01t0547600-01	Rice	plasma membrane	46.07	45.98
TraesCS7D01G420900.1	Wheat	golgi, peroxisome, plasma membrane	45.66	45.76
TraesCS7B01G328700.1	Wheat	golgi, peroxisome, plasma membrane	45.66	45.47
OQU87011	Sorghum	plasma membrane	45.04	45.04
Zm00001d044504_P001	Maize	plasma membrane	44.01	43.92
TraesCS7A01G428500.1	Wheat	golgi, peroxisome, plasma membrane	41.12	42.52
Bra031611.1-P	Field mustard	golgi, peroxisome, plasma membrane	43.59	41.7
Zm00001d025783_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid, vacuole	16.53	41.45
Bra018655.1-P	Field mustard	golgi, peroxisome, plasma membrane	42.77	41.32
Bra018656.1-P	Field mustard	golgi, peroxisome, plasma membrane	41.53	41.27
Bra031610.1-P	Field mustard	golgi, peroxisome, plasma membrane	44.42	40.64
Bra030713.1-P	Field mustard	golgi, peroxisome, plasma membrane	43.59	39.81
Bra038302.1-P	Field mustard	peroxisome	44.01	39.59
Bra037625.1-P	Field mustard	peroxisome	43.59	39.0
Bra002451.1-P	Field mustard	golgi, peroxisome, plasma membrane	42.98	38.81
Bra020230.1-P	Field mustard	peroxisome	39.05	38.73
Bra002453.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	42.15	38.71
Bra037626.1-P	Field mustard	peroxisome	43.39	38.46
Bra034142.1-P	Field mustard	plasma membrane	12.19	38.31
Bra038301.1-P	Field mustard	golgi, peroxisome, plasma membrane	42.56	37.94
Bra016747.1-P	Field mustard	plasma membrane	44.21	37.22
Zm00001d016468_P001	Maize	plasma membrane	15.7	35.51

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	EnsemblPlantsGene:Bra023475	EnsemblPlants:Bra023475.1	EnsemblPlants:Bra023475.1-P
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0008150	GO:GO:0009705	GO:GO:0015112	GO:GO:0015706
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR020846	UniProt:M4E3X2	InterPro:MFS
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690	PFscan:PS50850	PANTHER:PTHR23515	PANTHER:PTHR23515:SF5
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002543572	SEG:seg	:	:

Description

AT1G12940 (E=8e-119) ATNRT2.5 | ATNRT2.5 (nitrate transporter2.5); nitrate transmembrane transporter

Coordinates

chrA02:-:3523291..3524816

Molecular Weight (calculated)

52135.1 Da

IEP (calculated)

7.725

GRAVY (calculated)

0.475

Length

484 amino acids

Sequence
(BLAST)

001: MEPSQRNTET PSFHYATVPV DSSGRATVFR PFSLSSPHSR AFHLAWLSLF SCFFSTFSIP PLIPVISSDI RLSASAVSAA GTASFAGSIF SRLAMGPLCD
101: LIGPRTSSAI LSFLTAPAIL STAFVSSPTS FVLVRFFVGF SLANFVANQY WMSSMFSGNV VGLANGVSAG WANVGADLSQ LLMPILYTTI AEFLPRDVSW
201: RVSFVFPAVF QVVTAVLVLI YGQDTPDGKR KAYKDRTQLE EDERSSFVRI LLDGLGDYRA WILALLYGYS FGVELTTDNM IAGYFYERFG MNLEAAGTIA
301: ASFAISNVAS RPAGGMVSDL LGKRFGMRGR LWGLWIVQSV AGLLCLLLGR VNSLWGSIAV MWVFSIFVQA ASGLIFGVVP FVSTRSLGVV AGMTGSGGTV
401: GAVVTQVLLF SGDNVRKQRS ISLMGLMTFV ASLSVTLIYF PRWGGIFCGP SSSSECDDCS QRLLGDEEED DDKVVISGRL RPVC

Best Arabidopsis Sequence Match ( AT5G14570.1 )
(BLAST)

001: MEPSQRNTKP PSFSDSTIPV DSDGRATVFR PFSLSSPHSR AFHLAWLSLF SCFFSTFSIP PLVPVISSDL NLSASTVSAA GIASFAGSIF SRLAMGPLCD
101: LIGPRTSSAI LSFLTAPVIL SASLVSSPTS FILVRFFVGF SLANFVANQY WMSSMFSGNV IGLANGVSAG WANVGAGISQ LLMPLIYSTI AEFLPRAVAW
201: RVSFVFPAIF QVTTAVLVLL YGQDTPHGNR KNSNQNKLTI PEEEEVLVVE EDERSSFVEI LIGGLGNYRA WILALLYGYS YGVELTTDNV IAGYFYERFG
301: VNLEAAGTIA ASFGISNIAS RPAGGMISDA LGKRFGMRGR LWGLWIVQSV AGLLCVLLGR VNSLWGSILV MWVFSVFVQA ASGLVFGVVP FVSTRSLGVV
401: AGITGSGGTV GAVVTQFLLF SGDDVRKQRS ISLMGLMTFV FALSVTSIYF PQWGGMCCGP SSSSEEEDIS RGLLVEDEDE EGKVVSGSLR PVC

Arabidopsis Description

NRT2.7NRT2.7 [Source:UniProtKB/TrEMBL;Acc:A0A178UKX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.