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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plastid, plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane, plastid
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68730 Canola endoplasmic reticulum, plasma membrane 71.35 95.67
AT5G60770.1 Thale cress plasma membrane 94.88 94.88
CDY26984 Canola plasma membrane 73.43 84.87
Bra030713.1-P Field mustard golgi, peroxisome, plasma membrane 84.06 83.58
Bra018655.1-P Field mustard golgi, peroxisome, plasma membrane 77.8 81.84
Bra031610.1-P Field mustard golgi, peroxisome, plasma membrane 81.59 81.29
Bra018656.1-P Field mustard golgi, peroxisome, plasma membrane 74.76 80.9
VIT_06s0061g00320.t01 Wine grape peroxisome 80.83 80.38
KRH22855 Soybean peroxisome 80.46 80.0
KRH30604 Soybean peroxisome 80.46 80.0
KRH26509 Soybean peroxisome 80.08 79.62
Bra031611.1-P Field mustard golgi, peroxisome, plasma membrane 76.28 79.45
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 71.35 74.9
GSMUA_Achr11P... Banana cytosol 68.5 74.9
Bra034142.1-P Field mustard plasma membrane 21.82 74.68
VIT_06s0061g00310.t01 Wine grape plasma membrane 35.1 74.3
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 61.67 72.87
Zm00001d054057_P001 Maize extracellular 70.78 71.18
Zm00001d054060_P001 Maize plastid 70.59 70.99
Bra037626.1-P Field mustard peroxisome 73.43 70.88
TraesCS6A01G030900.1 Wheat plasma membrane 68.12 70.81
EES04351 Sorghum golgi, peroxisome, plasma membrane 70.78 70.78
EES06135 Sorghum golgi, peroxisome, plasma membrane 70.78 70.78
Os02t0112100-01 Rice golgi, plasma membrane, plastid 71.54 70.73
Os02t0112600-01 Rice golgi, plasma membrane, plastid 71.54 70.73
TraesCS6B01G044200.1 Wheat plasma membrane 67.93 70.61
TraesCS6A01G031000.1 Wheat plasma membrane 67.93 70.61
HORVU6Hr1G005590.1 Barley plasma membrane 67.74 70.41
TraesCS6A01G030700.1 Wheat plastid 67.74 70.41
TraesCS6B01G044300.1 Wheat plasma membrane 67.74 70.41
TraesCS6D01G035900.1 Wheat plasma membrane 67.74 70.41
Bra038301.1-P Field mustard golgi, peroxisome, plasma membrane 72.49 70.35
TraesCS6A01G031200.1 Wheat plasma membrane 67.93 70.33
HORVU6Hr1G005750.1 Barley cytosol, plastid 13.47 70.3
TraesCS6A01G031100.1 Wheat plastid 67.55 70.22
TraesCS6A01G030800.1 Wheat plasma membrane 67.55 70.22
TraesCS6D01G035700.1 Wheat plasma membrane 67.55 70.22
TraesCS6B01G044000.1 Wheat plasma membrane 67.74 70.14
TraesCS6D01G035800.1 Wheat plasma membrane 67.36 70.02
TraesCS6B01G044100.1 Wheat plastid 67.36 70.02
TraesCS6D01G035600.1 Wheat plasma membrane 67.55 69.94
Bra037625.1-P Field mustard peroxisome 71.35 69.5
Bra038302.1-P Field mustard peroxisome 70.59 69.14
Bra002451.1-P Field mustard golgi, peroxisome, plasma membrane 69.83 68.66
Bra020230.1-P Field mustard peroxisome 62.81 67.83
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 65.09 67.39
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 34.35 66.54
TraesCS2A01G074800.1 Wheat plasma membrane 63.19 66.33
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 57.69 65.94
TraesCS6B01G046600.1 Wheat plasma membrane 63.57 65.82
TraesCS6D01G037900.1 Wheat plasma membrane 63.38 65.62
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 63.19 65.55
TraesCS2D01G073500.1 Wheat plasma membrane 62.05 65.53
HORVU6Hr1G005580.1 Barley plastid 67.74 65.5
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 63.19 65.42
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 63.19 65.42
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 63.0 65.35
TraesCS6A01G032500.1 Wheat plastid 63.0 65.35
TraesCS6A01G032400.1 Wheat plastid 63.0 65.35
TraesCS6D01G037800.1 Wheat plasma membrane 62.81 65.29
HORVU6Hr1G005770.1 Barley plasma membrane 63.0 65.23
TraesCS6A01G033000.1 Wheat plasma membrane 63.0 65.23
TraesCS6B01G046500.1 Wheat plasma membrane 62.62 65.09
TraesCS6B01G045700.1 Wheat plastid 62.43 65.02
TraesCS6D01G038200.1 Wheat plasma membrane 62.62 64.96
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 62.62 64.96
TraesCS6A01G033100.1 Wheat plasma membrane 62.43 64.76
TraesCS6D01G038000.1 Wheat plasma membrane 62.24 64.69
TraesCS6B01G046700.1 Wheat plasma membrane 62.24 64.57
TraesCS6D01G038300.1 Wheat plasma membrane 62.24 64.57
HORVU6Hr1G005930.1 Barley plasma membrane 62.24 64.57
Zm00001d014976_P001 Maize plasma membrane 63.95 64.56
TraesCS6A01G032800.1 Wheat plasma membrane 62.05 64.5
EES04350 Sorghum plastid 65.46 64.49
TraesCS6A01G033200.1 Wheat plasma membrane 61.86 64.17
HORVU6Hr1G005720.1 Barley extracellular 45.73 63.59
TraesCS6B01G044400.1 Wheat plastid 68.12 63.54
TraesCS6B01G044500.1 Wheat plastid 58.44 63.51
Bra016747.1-P Field mustard plasma membrane 47.06 43.13
Bra023475.1-P Field mustard plastid 38.71 42.15
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.10MapMan:25.1.3.1EnsemblPlantsGene:Bra002453EnsemblPlants:Bra002453.1EnsemblPlants:Bra002453.1-P
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0009987GO:GO:0015112GO:GO:0015706GO:GO:0016020GO:GO:0016021
GO:GO:0055085GO:GO:0071249InterPro:IPR020846UniProt:M4CE22InterPro:MFSInterPro:MFS_dom
InterPro:MFS_trans_sfPFAM:PF07690PFscan:PS50850PANTHER:PTHR23515PANTHER:PTHR23515:SF3SUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI00025442B8SEG:seg:::
Description
AT5G60770 (E=3e-286) ATNRT2.4, NRT2.4 | ATNRT2.4; nitrate transmembrane transporter
Coordinates
chrA10:+:9495122..9497490
Molecular Weight (calculated)
57610.2 Da
IEP (calculated)
8.748
GRAVY (calculated)
0.367
Length
527 amino acids
Sequence
(BLAST)
001: MANGLGEPGS SMHGVTGREQ SYAFSVQSPV VPSDTSAMFS LPVDTEHKAK VFKLLSFAAP HMRTFHLAWI SFFTCFISTF AAAPLVPIIR DNLNLTRQDV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVAD AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPLVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD ISARYFGMRG RLWTLWIIQT LGGCFCVLLG RATTLPTAVF SMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFTTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLS STGDEVKSTE EYYYLKEWTE TEKQKGMHEG
501: SLKFAVNSRS ERGRFVASGP DRTPEHV
Best Arabidopsis Sequence Match ( AT5G60770.1 )
(BLAST)
001: MADGFGEPGS SMHGVTGREQ SYAFSVESPA VPSDSSAKFS LPVDTEHKAK VFKLLSFEAP HMRTFHLAWI SFFTCFISTF AAAPLVPIIR DNLNLTRQDV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV
Arabidopsis Description
NRT2.4High affinity nitrate transporter 2.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.