Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- plasma membrane 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU5Hr1G115500.4 | |
HORVU6Hr1G053710.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU6Hr1G005590.1 | Barley | plasma membrane | 92.66 | 99.61 |
TraesCS6D01G035800.1 | Wheat | plasma membrane | 92.48 | 99.41 |
TraesCS6B01G044300.1 | Wheat | plasma membrane | 92.11 | 99.01 |
HORVU6Hr1G005570.1 | Barley | golgi, plasma membrane | 49.17 | 98.53 |
TraesCS6A01G030900.1 | Wheat | plasma membrane | 91.56 | 98.42 |
HORVU6Hr1G005600.2 | Barley | endoplasmic reticulum | 83.12 | 89.0 |
HORVU6Hr1G005780.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 70.64 | 83.51 |
HORVU6Hr1G005720.1 | Barley | extracellular | 57.25 | 82.32 |
HORVU6Hr1G005770.1 | Barley | plasma membrane | 75.96 | 81.34 |
Zm00001d054060_P001 | Maize | plastid | 77.98 | 81.11 |
HORVU6Hr1G005930.1 | Barley | plasma membrane | 75.6 | 81.1 |
EES06135 | Sorghum | golgi, peroxisome, plasma membrane | 78.35 | 81.02 |
EES04351 | Sorghum | golgi, peroxisome, plasma membrane | 78.35 | 81.02 |
Zm00001d054057_P001 | Maize | extracellular | 77.8 | 80.92 |
Os02t0112100-01 | Rice | golgi, plasma membrane, plastid | 78.35 | 80.11 |
Os02t0112600-01 | Rice | golgi, plasma membrane, plastid | 78.35 | 80.11 |
HORVU6Hr1G005750.1 | Barley | cytosol, plastid | 14.31 | 77.23 |
Zm00001d014976_P001 | Maize | plasma membrane | 72.29 | 75.48 |
EES04350 | Sorghum | plastid | 72.48 | 73.83 |
KRH22855 | Soybean | peroxisome | 71.56 | 73.58 |
KRH26509 | Soybean | peroxisome | 71.38 | 73.4 |
KRH30604 | Soybean | peroxisome | 70.83 | 72.83 |
GSMUA_Achr8P14230_001 | Banana | golgi, peroxisome, plasma membrane | 66.97 | 72.71 |
PGSC0003DMT400050658 | Potato | plasma membrane | 57.8 | 72.58 |
GSMUA_Achr11P... | Banana | cytosol | 63.3 | 71.58 |
VIT_06s0061g00320.t01 | Wine grape | peroxisome | 68.99 | 70.94 |
CDY06298 | Canola | golgi, peroxisome, plasma membrane | 54.68 | 70.78 |
VIT_08s0040g01500.t01 | Wine grape | golgi, peroxisome, plasma membrane, plastid | 68.81 | 70.62 |
VIT_06s0061g00310.t01 | Wine grape | plasma membrane | 31.93 | 69.88 |
PGSC0003DMT400092589 | Potato | plasma membrane | 68.26 | 69.66 |
CDY32821 | Canola | cytosol, peroxisome, plasma membrane | 59.08 | 69.4 |
CDX93591 | Canola | golgi, peroxisome, plasma membrane | 59.08 | 69.4 |
PGSC0003DMT400031306 | Potato | plasma membrane | 44.77 | 69.12 |
PGSC0003DMT400002924 | Potato | plasma membrane | 67.16 | 69.06 |
AT1G08090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 67.16 | 69.06 |
Bra030713.1-P | Field mustard | golgi, peroxisome, plasma membrane | 67.16 | 69.06 |
CDX93592 | Canola | golgi, peroxisome, plasma membrane | 58.17 | 68.91 |
CDY22704 | Canola | cytosol, peroxisome, plasma membrane | 58.53 | 68.9 |
CDY72274 | Canola | plasma membrane | 44.59 | 68.84 |
CDY70994 | Canola | golgi, plasma membrane | 44.59 | 68.84 |
Bra018656.1-P | Field mustard | golgi, peroxisome, plasma membrane | 61.47 | 68.79 |
Bra031610.1-P | Field mustard | golgi, peroxisome, plasma membrane | 66.61 | 68.62 |
AT5G60770.1 | Thale cress | plasma membrane | 66.06 | 68.31 |
PGSC0003DMT400031304 | Potato | plasma membrane | 66.42 | 68.3 |
Solyc06g010250.2.1 | Tomato | plasma membrane | 62.39 | 68.27 |
Bra018655.1-P | Field mustard | golgi, peroxisome, plasma membrane | 62.75 | 68.26 |
Bra034142.1-P | Field mustard | plasma membrane | 19.27 | 68.18 |
CDY22703 | Canola | golgi, peroxisome, plasma membrane | 62.75 | 68.13 |
PGSC0003DMT400050654 | Potato | plasma membrane | 65.5 | 68.0 |
Bra031611.1-P | Field mustard | golgi, peroxisome, plasma membrane | 63.12 | 67.98 |
CDY06299 | Canola | golgi, peroxisome, plasma membrane | 63.12 | 67.98 |
CDY68730 | Canola | endoplasmic reticulum, plasma membrane | 48.99 | 67.94 |
Solyc11g069760.1.1 | Tomato | extracellular, plasma membrane | 22.75 | 67.76 |
Bra002453.1-P | Field mustard | golgi, peroxisome, plasma membrane, plastid | 65.5 | 67.74 |
KRH25078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 55.41 | 67.71 |
Solyc11g069750.1.1 | Tomato | extracellular | 65.14 | 67.62 |
AT1G08100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 63.3 | 66.09 |
PGSC0003DMT400040689 | Potato | plasma membrane | 62.2 | 64.69 |
AT5G60780.1 | Thale cress | peroxisome | 63.85 | 64.56 |
Bra002451.1-P | Field mustard | golgi, peroxisome, plasma membrane | 63.12 | 64.18 |
CDY50324 | Canola | plasma membrane | 56.15 | 63.75 |
CDY69111 | Canola | peroxisome | 56.15 | 63.75 |
Solyc06g074990.1.1 | Tomato | plasma membrane | 61.47 | 63.69 |
Bra038302.1-P | Field mustard | peroxisome | 62.75 | 63.57 |
AT3G45060.1 | Thale cress | peroxisome | 63.12 | 63.47 |
Bra037625.1-P | Field mustard | peroxisome | 62.75 | 63.22 |
Bra020230.1-P | Field mustard | peroxisome | 56.33 | 62.91 |
Bra037626.1-P | Field mustard | peroxisome | 62.94 | 62.82 |
CDY31024 | Canola | endoplasmic reticulum, plasma membrane | 17.61 | 62.34 |
Bra038301.1-P | Field mustard | golgi, peroxisome, plasma membrane | 61.1 | 61.33 |
CDY26984 | Canola | plasma membrane | 50.64 | 60.53 |
CDY53125 | Canola | plastid | 19.08 | 56.52 |
HORVU3Hr1G066090.1 | Barley | plasma membrane | 51.56 | 54.67 |
CDY31023 | Canola | endoplasmic reticulum, extracellular | 8.07 | 52.38 |
CDX99169 | Canola | cytosol | 6.79 | 49.33 |
AT4G14358.1 | Thale cress | cytosol | 7.16 | 44.83 |
Solyc11g069740.1.1 | Tomato | cytosol, peroxisome | 37.61 | 39.65 |
HORVU7Hr1G098550.3 | Barley | plasma membrane | 34.5 | 38.92 |
Protein Annotations
EnsemblPlants:HORVU6Hr1G005580.1 | EnsemblPlantsGene:HORVU6Hr1G005580 | Gene3D:1.20.1250.20 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom |
InterPro:MFS_trans_sf | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | PFAM:PF07690 | SEG:seg | SUPFAM:SSF103473 |
TMHMM:TMhelix | UniParc:UPI000B481B46 | UniProt:A0A287T7N0 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | : |
Description
No Description!
Coordinates
chrchr6H:+:12371132..12373090
Molecular Weight (calculated)
59004.9 Da
IEP (calculated)
9.210
GRAVY (calculated)
0.295
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: QTTAISTSQL PLQLIKQASS KPPRRKQRRR LARSSKVEME VEAGAHGDTA ASKFTLPVDS EHKAKSFRLF SFANPHMRTF HLSWISFFTC FVSTFAAAPL
101: VPIIRDNLNL AKADIGNAGV ASVSGSIFSR LAMGAICDLL GPRYGCAFLV MLSAPTVFCM AVIDDASGYI AVRFLIGFSL ATFVSCQYWM STMFNSKIIG
201: TVNGLAAGWG NMGGGATQLI MPLVFHAIQK CGATPFVAWR IAYFVPGMMH IVMGLLVLTM GQDLPDGNLA SLQKKGDMAK DKFSKVLWGA VTNYRTWIFV
301: LLYGYCMGVE LTTDNVIAEY YFDHFHLDLR AAGTIAACFG MANIVARPMG GYLSDLGARY FGMRARLWNI WILQTAGGAF CIWLGRASAL PASVTAMVLF
401: SICAQAACGA IFGVAPFVSR RSLGIISGLT GAGGNVGAGL TQLLFFTSSQ YSTGRGLEYM GIMIMACTLP VALVHFPQWG SMFFPASADA TEEEYYASEW
501: SEEEKGKGLH IAGQKFAENS RSERGRRNVI LATSATPPNN TPQHV
101: VPIIRDNLNL AKADIGNAGV ASVSGSIFSR LAMGAICDLL GPRYGCAFLV MLSAPTVFCM AVIDDASGYI AVRFLIGFSL ATFVSCQYWM STMFNSKIIG
201: TVNGLAAGWG NMGGGATQLI MPLVFHAIQK CGATPFVAWR IAYFVPGMMH IVMGLLVLTM GQDLPDGNLA SLQKKGDMAK DKFSKVLWGA VTNYRTWIFV
301: LLYGYCMGVE LTTDNVIAEY YFDHFHLDLR AAGTIAACFG MANIVARPMG GYLSDLGARY FGMRARLWNI WILQTAGGAF CIWLGRASAL PASVTAMVLF
401: SICAQAACGA IFGVAPFVSR RSLGIISGLT GAGGNVGAGL TQLLFFTSSQ YSTGRGLEYM GIMIMACTLP VALVHFPQWG SMFFPASADA TEEEYYASEW
501: SEEEKGKGLH IAGQKFAENS RSERGRRNVI LATSATPPNN TPQHV
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.