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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • plasma membrane 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G005590.1 Barley plasma membrane 92.66 99.61
TraesCS6D01G035800.1 Wheat plasma membrane 92.48 99.41
TraesCS6B01G044300.1 Wheat plasma membrane 92.11 99.01
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 49.17 98.53
TraesCS6A01G030900.1 Wheat plasma membrane 91.56 98.42
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 83.12 89.0
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 70.64 83.51
HORVU6Hr1G005720.1 Barley extracellular 57.25 82.32
HORVU6Hr1G005770.1 Barley plasma membrane 75.96 81.34
Zm00001d054060_P001 Maize plastid 77.98 81.11
HORVU6Hr1G005930.1 Barley plasma membrane 75.6 81.1
EES06135 Sorghum golgi, peroxisome, plasma membrane 78.35 81.02
EES04351 Sorghum golgi, peroxisome, plasma membrane 78.35 81.02
Zm00001d054057_P001 Maize extracellular 77.8 80.92
Os02t0112100-01 Rice golgi, plasma membrane, plastid 78.35 80.11
Os02t0112600-01 Rice golgi, plasma membrane, plastid 78.35 80.11
HORVU6Hr1G005750.1 Barley cytosol, plastid 14.31 77.23
Zm00001d014976_P001 Maize plasma membrane 72.29 75.48
EES04350 Sorghum plastid 72.48 73.83
KRH22855 Soybean peroxisome 71.56 73.58
KRH26509 Soybean peroxisome 71.38 73.4
KRH30604 Soybean peroxisome 70.83 72.83
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 66.97 72.71
PGSC0003DMT400050658 Potato plasma membrane 57.8 72.58
GSMUA_Achr11P... Banana cytosol 63.3 71.58
VIT_06s0061g00320.t01 Wine grape peroxisome 68.99 70.94
CDY06298 Canola golgi, peroxisome, plasma membrane 54.68 70.78
VIT_08s0040g01500.t01 Wine grape golgi, peroxisome, plasma membrane, plastid 68.81 70.62
VIT_06s0061g00310.t01 Wine grape plasma membrane 31.93 69.88
PGSC0003DMT400092589 Potato plasma membrane 68.26 69.66
CDY32821 Canola cytosol, peroxisome, plasma membrane 59.08 69.4
CDX93591 Canola golgi, peroxisome, plasma membrane 59.08 69.4
PGSC0003DMT400031306 Potato plasma membrane 44.77 69.12
PGSC0003DMT400002924 Potato plasma membrane 67.16 69.06
AT1G08090.1 Thale cress cytosol, peroxisome, plasma membrane 67.16 69.06
Bra030713.1-P Field mustard golgi, peroxisome, plasma membrane 67.16 69.06
CDX93592 Canola golgi, peroxisome, plasma membrane 58.17 68.91
CDY22704 Canola cytosol, peroxisome, plasma membrane 58.53 68.9
CDY72274 Canola plasma membrane 44.59 68.84
CDY70994 Canola golgi, plasma membrane 44.59 68.84
Bra018656.1-P Field mustard golgi, peroxisome, plasma membrane 61.47 68.79
Bra031610.1-P Field mustard golgi, peroxisome, plasma membrane 66.61 68.62
AT5G60770.1 Thale cress plasma membrane 66.06 68.31
PGSC0003DMT400031304 Potato plasma membrane 66.42 68.3
Solyc06g010250.2.1 Tomato plasma membrane 62.39 68.27
Bra018655.1-P Field mustard golgi, peroxisome, plasma membrane 62.75 68.26
Bra034142.1-P Field mustard plasma membrane 19.27 68.18
CDY22703 Canola golgi, peroxisome, plasma membrane 62.75 68.13
PGSC0003DMT400050654 Potato plasma membrane 65.5 68.0
Bra031611.1-P Field mustard golgi, peroxisome, plasma membrane 63.12 67.98
CDY06299 Canola golgi, peroxisome, plasma membrane 63.12 67.98
CDY68730 Canola endoplasmic reticulum, plasma membrane 48.99 67.94
Solyc11g069760.1.1 Tomato extracellular, plasma membrane 22.75 67.76
Bra002453.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 65.5 67.74
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 55.41 67.71
Solyc11g069750.1.1 Tomato extracellular 65.14 67.62
AT1G08100.1 Thale cress cytosol, peroxisome, plasma membrane 63.3 66.09
PGSC0003DMT400040689 Potato plasma membrane 62.2 64.69
AT5G60780.1 Thale cress peroxisome 63.85 64.56
Bra002451.1-P Field mustard golgi, peroxisome, plasma membrane 63.12 64.18
CDY50324 Canola plasma membrane 56.15 63.75
CDY69111 Canola peroxisome 56.15 63.75
Solyc06g074990.1.1 Tomato plasma membrane 61.47 63.69
Bra038302.1-P Field mustard peroxisome 62.75 63.57
AT3G45060.1 Thale cress peroxisome 63.12 63.47
Bra037625.1-P Field mustard peroxisome 62.75 63.22
Bra020230.1-P Field mustard peroxisome 56.33 62.91
Bra037626.1-P Field mustard peroxisome 62.94 62.82
CDY31024 Canola endoplasmic reticulum, plasma membrane 17.61 62.34
Bra038301.1-P Field mustard golgi, peroxisome, plasma membrane 61.1 61.33
CDY26984 Canola plasma membrane 50.64 60.53
CDY53125 Canola plastid 19.08 56.52
HORVU3Hr1G066090.1 Barley plasma membrane 51.56 54.67
CDY31023 Canola endoplasmic reticulum, extracellular 8.07 52.38
CDX99169 Canola cytosol 6.79 49.33
AT4G14358.1 Thale cress cytosol 7.16 44.83
Solyc11g069740.1.1 Tomato cytosol, peroxisome 37.61 39.65
HORVU7Hr1G098550.3 Barley plasma membrane 34.5 38.92
Protein Annotations
EnsemblPlants:HORVU6Hr1G005580.1EnsemblPlantsGene:HORVU6Hr1G005580Gene3D:1.20.1250.20GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:IPR020846InterPro:MFSInterPro:MFS_dom
InterPro:MFS_trans_sfPANTHER:PTHR23515PANTHER:PTHR23515:SF3PFAM:PF07690SEG:segSUPFAM:SSF103473
TMHMM:TMhelixUniParc:UPI000B481B46UniProt:A0A287T7N0MapMan:24.2.2.10MapMan:25.1.3.1:
Description
No Description!
Coordinates
chrchr6H:+:12371132..12373090
Molecular Weight (calculated)
59004.9 Da
IEP (calculated)
9.210
GRAVY (calculated)
0.295
Length
545 amino acids
Sequence
(BLAST)
001: QTTAISTSQL PLQLIKQASS KPPRRKQRRR LARSSKVEME VEAGAHGDTA ASKFTLPVDS EHKAKSFRLF SFANPHMRTF HLSWISFFTC FVSTFAAAPL
101: VPIIRDNLNL AKADIGNAGV ASVSGSIFSR LAMGAICDLL GPRYGCAFLV MLSAPTVFCM AVIDDASGYI AVRFLIGFSL ATFVSCQYWM STMFNSKIIG
201: TVNGLAAGWG NMGGGATQLI MPLVFHAIQK CGATPFVAWR IAYFVPGMMH IVMGLLVLTM GQDLPDGNLA SLQKKGDMAK DKFSKVLWGA VTNYRTWIFV
301: LLYGYCMGVE LTTDNVIAEY YFDHFHLDLR AAGTIAACFG MANIVARPMG GYLSDLGARY FGMRARLWNI WILQTAGGAF CIWLGRASAL PASVTAMVLF
401: SICAQAACGA IFGVAPFVSR RSLGIISGLT GAGGNVGAGL TQLLFFTSSQ YSTGRGLEYM GIMIMACTLP VALVHFPQWG SMFFPASADA TEEEYYASEW
501: SEEEKGKGLH IAGQKFAENS RSERGRRNVI LATSATPPNN TPQHV
Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.