Factsheet for Solyc06g074990.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400031306	Potato	plasma membrane	58.75	87.54
PGSC0003DMT400031304	Potato	plasma membrane	85.36	84.72
Solyc11g069760.1.1	Tomato	extracellular, plasma membrane	24.52	70.49
GSMUA_Achr8P14230_001	Banana	golgi, peroxisome, plasma membrane	66.35	69.52
GSMUA_Achr11P...	Banana	cytosol	61.41	67.01
Os02t0112100-01	Rice	golgi, plasma membrane, plastid	66.92	66.04
Os02t0112600-01	Rice	golgi, plasma membrane, plastid	66.92	66.04
HORVU6Hr1G005590.1	Barley	plasma membrane	63.5	65.88
TraesCS6A01G030900.1	Wheat	plasma membrane	63.5	65.88
TraesCS6A01G031000.1	Wheat	plasma membrane	63.5	65.88
EES06135	Sorghum	golgi, peroxisome, plasma membrane	65.97	65.84
TraesCS6D01G035900.1	Wheat	plasma membrane	63.31	65.68
TraesCS6D01G035800.1	Wheat	plasma membrane	63.31	65.68
TraesCS6D01G035700.1	Wheat	plasma membrane	63.31	65.68
TraesCS6B01G044300.1	Wheat	plasma membrane	63.31	65.68
TraesCS6B01G044200.1	Wheat	plasma membrane	63.31	65.68
TraesCS6A01G031100.1	Wheat	plastid	63.31	65.68
EES04351	Sorghum	golgi, peroxisome, plasma membrane	65.78	65.65
TraesCS6B01G044100.1	Wheat	plastid	63.12	65.48
TraesCS6A01G030800.1	Wheat	plasma membrane	63.12	65.48
TraesCS6A01G030700.1	Wheat	plastid	63.12	65.48
Zm00001d054060_P001	Maize	plastid	65.21	65.46
TraesCS6A01G031200.1	Wheat	plasma membrane	63.31	65.42
Zm00001d054057_P001	Maize	extracellular	65.02	65.27
TraesCS6D01G035600.1	Wheat	plasma membrane	63.12	65.23
TraesCS6B01G044000.1	Wheat	plasma membrane	62.55	64.64
HORVU6Hr1G005600.2	Barley	endoplasmic reticulum	62.17	64.24
Solyc06g010250.2.1	Tomato	plasma membrane	60.46	63.86
HORVU6Hr1G005780.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	55.89	63.77
Solyc11g069750.1.1	Tomato	extracellular	61.79	61.9
HORVU6Hr1G005580.1	Barley	plastid	63.69	61.47
TraesCS6A01G033000.1	Wheat	plasma membrane	59.32	61.3
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	59.13	61.1
TraesCS6B01G046600.1	Wheat	plasma membrane	59.13	61.1
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	58.75	60.83
TraesCS6A01G032500.1	Wheat	plastid	58.75	60.83
TraesCS6A01G032400.1	Wheat	plastid	58.75	60.83
TraesCS6D01G037800.1	Wheat	plasma membrane	58.56	60.75
TraesCS6A01G032900.1	Wheat	golgi, plasma membrane, vacuole	58.75	60.71
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	58.56	60.63
TraesCS6D01G037900.1	Wheat	plasma membrane	58.56	60.51
TraesCS6B01G045700.1	Wheat	plastid	58.17	60.47
TraesCS6B01G046700.1	Wheat	plasma membrane	58.37	60.43
TraesCS6D01G038200.1	Wheat	plasma membrane	58.37	60.43
TraesCS6B01G045600.1	Wheat	golgi, plasma membrane, vacuole	58.37	60.43
HORVU6Hr1G005930.1	Barley	plasma membrane	58.37	60.43
TraesCS6B01G046500.1	Wheat	plasma membrane	58.17	60.35
TraesCS6A01G032800.1	Wheat	plasma membrane	58.17	60.35
TraesCS2D01G073500.1	Wheat	plasma membrane	57.22	60.32
TraesCS6A01G033200.1	Wheat	plasma membrane	58.17	60.24
TraesCS6A01G033100.1	Wheat	plasma membrane	58.17	60.24
TraesCS2A01G074800.1	Wheat	plasma membrane	57.41	60.16
HORVU6Hr1G005770.1	Barley	plasma membrane	58.17	60.12
TraesCS6D01G038300.1	Wheat	plasma membrane	57.98	60.04
HORVU6Hr1G005570.1	Barley	golgi, plasma membrane	30.8	59.56
TraesCS6B01G044400.1	Wheat	plastid	63.88	59.47
HORVU6Hr1G005750.1	Barley	cytosol, plastid	11.41	59.41
TraesCS6D01G038000.1	Wheat	plasma membrane	57.22	59.37
HORVU6Hr1G005720.1	Barley	extracellular	42.78	59.37
EES04350	Sorghum	plastid	59.51	58.5
TraesCS6B01G044500.1	Wheat	plastid	53.8	58.35
Zm00001d014976_P001	Maize	plasma membrane	57.79	58.24
Solyc02g067790.2.1	Tomato	golgi, peroxisome, plasma membrane	41.06	46.96
Solyc11g069740.1.1	Tomato	cytosol, peroxisome	41.25	41.97

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0006810
GO:GO:0008150	GO:GO:0009705	GO:GO:0009987	GO:GO:0015112	GO:GO:0015706	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	GO:GO:0071249	InterPro:IPR020846	UniProt:K4C9L5	InterPro:MFS
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690	PFscan:PS50850	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3
SUPFAM:SSF103473	EnsemblPlantsGene:Solyc06g074990.1	EnsemblPlants:Solyc06g074990.1.1	TMHMM:TMhelix	UniParc:UPI000276697B	SEG:seg

Description

No Description!

Coordinates

chr6:-:46490275..46493062

Molecular Weight (calculated)

57915.1 Da

IEP (calculated)

10.194

GRAVY (calculated)

0.269

Length

526 amino acids

Sequence
(BLAST)

001: MGEANVKKWA CKELKDHRGV LCMESPEENL FSLSPWLLQW CLRIPPPSFQ YRWITEHKAK QFKFYSFSKP HGLTFQLSWI SFFTCFVSTF AAAPLVPIIR
101: DNLNLTKMDV GNAGVASVSG SILSRLTMGA VCDLLGPRYG CAFLIMLSAP TVFCMSFVSS AGGYVAVRFM IGFSLATFVS CQYWMSTMFN SKIIGLVNGT
201: AAGWGNMGGG ATQLIMPLLY DIIRRAGATP FTAWRIAFFI PGWLHVVMGI LVLTLGQDLP DGNRGTLQKT GTVAKDKFGN ILWYAATNYR TWIFVLLYGY
301: SMGVELSTDN VIAEYFFDRF DLKLSTAGII AATFGMANLL ARPFGGFSSD YAAKKFGMRG RLWVLWILQT LGGVFCVLLG RSNSLPLAVT FMILFSIGAQ
401: AACGATFGII PFISRRSLGI ISGMTGAGGN FGSGLTQLLF FTSSKYSTAT GLTYMGFMII GSCFSHQQKI QSRERKNIII LQSTQRPERQ KGMHQNSLKF
501: AENCRSERGK RVGSAPTPPN LTPNRV

Best Arabidopsis Sequence Match ( AT5G60770.1 )
(BLAST)

001: MADGFGEPGS SMHGVTGREQ SYAFSVESPA VPSDSSAKFS LPVDTEHKAK VFKLLSFEAP HMRTFHLAWI SFFTCFISTF AAAPLVPIIR DNLNLTRQDV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV

Arabidopsis Description

NRT2.4High affinity nitrate transporter 2.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.