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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr6P12130_001
GSMUA_Achr9P01940_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G08090.1 GSMUA_Achr10P... AT5G50200.1 17012411
AT1G08090.1 GSMUA_Achr6P12130_001 AT5G50200.1 17012411
AT1G08090.1 GSMUA_Achr9P01940_001 AT5G50200.1 17012411
AT5G60780.1 GSMUA_Achr10P... AT5G50200.1 17012411
AT5G60780.1 GSMUA_Achr6P12130_001 AT5G50200.1 17012411
AT5G60780.1 GSMUA_Achr9P01940_001 AT5G50200.1 17012411
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana cytosol 88.65 92.32
KRH26509 Soybean peroxisome 83.07 78.68
KRH22855 Soybean peroxisome 82.47 78.11
KRH30604 Soybean peroxisome 80.88 76.6
VIT_08s0040g01500.t01 Wine grape golgi, peroxisome, plasma membrane, plastid 80.68 76.27
HORVU6Hr1G005750.1 Barley cytosol, plastid 15.34 76.24
PGSC0003DMT400031306 Potato plasma membrane 53.39 75.92
VIT_06s0061g00320.t01 Wine grape peroxisome 79.88 75.66
VIT_06s0061g00310.t01 Wine grape plasma membrane 37.45 75.5
PGSC0003DMT400002924 Potato plasma membrane 79.68 75.47
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 40.44 74.63
Zm00001d054057_P001 Maize extracellular 77.49 74.24
Zm00001d054060_P001 Maize plastid 77.49 74.24
PGSC0003DMT400050658 Potato plasma membrane 64.14 74.19
PGSC0003DMT400031304 Potato plasma membrane 78.29 74.15
EES04351 Sorghum golgi, peroxisome, plasma membrane 77.69 74.0
EES06135 Sorghum golgi, peroxisome, plasma membrane 77.69 74.0
Solyc11g069760.1.1 Tomato extracellular, plasma membrane 26.89 73.77
CDY06298 Canola golgi, peroxisome, plasma membrane 60.96 72.68
AT5G60770.1 Thale cress plasma membrane 76.1 72.49
Os02t0112100-01 Rice golgi, plasma membrane, plastid 76.89 72.42
Os02t0112600-01 Rice golgi, plasma membrane, plastid 76.89 72.42
TraesCS6A01G030900.1 Wheat plasma membrane 73.11 72.39
PGSC0003DMT400092589 Potato plasma membrane 76.89 72.28
TraesCS6A01G031000.1 Wheat plasma membrane 72.91 72.19
TraesCS6B01G044300.1 Wheat plasma membrane 72.91 72.19
TraesCS6D01G035700.1 Wheat plasma membrane 72.91 72.19
TraesCS6D01G035900.1 Wheat plasma membrane 72.91 72.19
HORVU6Hr1G005590.1 Barley plasma membrane 72.71 71.99
TraesCS6A01G030700.1 Wheat plastid 72.71 71.99
TraesCS6A01G030800.1 Wheat plasma membrane 72.71 71.99
TraesCS6A01G031100.1 Wheat plastid 72.71 71.99
TraesCS6D01G035800.1 Wheat plasma membrane 72.71 71.99
TraesCS6D01G035600.1 Wheat plasma membrane 72.91 71.91
TraesCS6B01G044100.1 Wheat plastid 72.51 71.79
TraesCS6B01G044200.1 Wheat plasma membrane 72.51 71.79
CDX93591 Canola golgi, peroxisome, plasma membrane 66.33 71.77
TraesCS6A01G031200.1 Wheat plasma membrane 72.71 71.71
TraesCS6B01G044000.1 Wheat plasma membrane 72.71 71.71
CDY32821 Canola cytosol, peroxisome, plasma membrane 66.14 71.55
Bra002453.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 74.9 71.35
Bra030713.1-P Field mustard golgi, peroxisome, plasma membrane 74.9 70.94
CDX93592 Canola golgi, peroxisome, plasma membrane 64.94 70.87
CDY22704 Canola cytosol, peroxisome, plasma membrane 65.34 70.84
Bra018656.1-P Field mustard golgi, peroxisome, plasma membrane 68.73 70.84
AT1G08090.1 Thale cress cytosol, peroxisome, plasma membrane 74.7 70.75
Bra018655.1-P Field mustard golgi, peroxisome, plasma membrane 70.52 70.66
CDY72274 Canola plasma membrane 49.6 70.54
Bra031610.1-P Field mustard golgi, peroxisome, plasma membrane 74.1 70.32
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 61.75 69.51
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 70.12 69.16
CDY70994 Canola golgi, plasma membrane 48.61 69.12
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 62.15 67.68
CDY22703 Canola golgi, peroxisome, plasma membrane 67.33 67.33
TraesCS6B01G046500.1 Wheat plasma membrane 67.73 67.06
Bra031611.1-P Field mustard golgi, peroxisome, plasma membrane 67.53 67.0
CDY06299 Canola golgi, peroxisome, plasma membrane 67.53 67.0
HORVU6Hr1G005580.1 Barley plastid 72.71 66.97
TraesCS6D01G037800.1 Wheat plasma membrane 67.53 66.86
AT1G08100.1 Thale cress cytosol, peroxisome, plasma membrane 69.52 66.86
CDY68730 Canola endoplasmic reticulum, plasma membrane 52.19 66.67
TraesCS6A01G032800.1 Wheat plasma membrane 67.33 66.67
TraesCS6A01G032400.1 Wheat plastid 67.33 66.54
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 67.33 66.54
CDY50324 Canola plasma membrane 63.55 66.46
TraesCS6B01G046600.1 Wheat plasma membrane 67.33 66.4
TraesCS6D01G037900.1 Wheat plasma membrane 67.33 66.4
Solyc06g074990.1.1 Tomato plasma membrane 69.52 66.35
CDY69111 Canola peroxisome 63.35 66.25
TraesCS6A01G033000.1 Wheat plasma membrane 67.13 66.21
Bra020230.1-P Field mustard peroxisome 64.34 66.19
HORVU6Hr1G005930.1 Barley plasma membrane 66.93 66.14
TraesCS6A01G033200.1 Wheat plasma membrane 66.93 66.14
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 66.93 66.14
TraesCS6D01G038200.1 Wheat plasma membrane 66.93 66.14
TraesCS6A01G032500.1 Wheat plastid 66.73 65.94
TraesCS6A01G033100.1 Wheat plasma membrane 66.73 65.94
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 66.73 65.94
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 66.73 65.82
TraesCS6B01G045700.1 Wheat plastid 66.33 65.81
TraesCS6D01G038300.1 Wheat plasma membrane 66.53 65.75
HORVU6Hr1G005770.1 Barley plasma membrane 66.53 65.62
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 66.53 65.62
CDY31024 Canola endoplasmic reticulum, plasma membrane 20.12 65.58
TraesCS6B01G046700.1 Wheat plasma membrane 66.33 65.55
Solyc11g069750.1.1 Tomato extracellular 68.53 65.52
TraesCS6B01G044400.1 Wheat plastid 73.71 65.49
PGSC0003DMT400050654 Potato plasma membrane 68.33 65.33
TraesCS6B01G044500.1 Wheat plastid 62.75 64.95
TraesCS6D01G038000.1 Wheat plasma membrane 65.54 64.89
EES04350 Sorghum plastid 69.12 64.86
Solyc06g010250.2.1 Tomato plasma membrane 64.34 64.86
Zm00001d014976_P001 Maize plasma membrane 67.33 64.75
Bra037626.1-P Field mustard peroxisome 70.32 64.65
AT5G60780.1 Thale cress peroxisome 69.32 64.56
Bra038302.1-P Field mustard peroxisome 69.12 64.5
Bra038301.1-P Field mustard golgi, peroxisome, plasma membrane 69.52 64.27
AT3G45060.1 Thale cress peroxisome 69.32 64.21
Bra037625.1-P Field mustard peroxisome 69.12 64.14
TraesCS2A01G074800.1 Wheat plasma membrane 63.74 63.74
TraesCS2D01G073500.1 Wheat plasma membrane 63.15 63.53
Bra002451.1-P Field mustard golgi, peroxisome, plasma membrane 67.73 63.43
PGSC0003DMT400040689 Potato plasma membrane 65.74 62.98
HORVU6Hr1G005720.1 Barley extracellular 47.21 62.53
CDY26984 Canola plasma membrane 54.58 60.09
GSMUA_Achr4P13270_001 Banana plasma membrane 54.58 59.7
GSMUA_Achr4P06400_001 Banana plasma membrane 54.18 59.13
Bra034142.1-P Field mustard plasma membrane 17.73 57.79
CDY53125 Canola plastid 20.32 55.43
CDY31023 Canola endoplasmic reticulum, extracellular 8.96 53.57
CDX99169 Canola cytosol 7.37 49.33
GSMUA_Achr1P25450_001 Banana plasma membrane 44.62 48.17
Solyc11g069740.1.1 Tomato cytosol, peroxisome 47.01 45.65
AT4G14358.1 Thale cress cytosol 7.77 44.83
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.10MapMan:25.1.3.1GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr8G14230_001EnsemblPlants:GSMUA_Achr8P14230_001EnsemblPlants:GSMUA_Achr8T14230_001
InterPro:IPR020846UniProt:M0TQC6InterPro:MFSInterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF07690
PANTHER:PTHR23515PANTHER:PTHR23515:SF3SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI00029578E2SEG:seg
Description
transporter, major facilitator family, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G14230_001]
Coordinates
chr8:-:10801825..10803506
Molecular Weight (calculated)
54057.9 Da
IEP (calculated)
9.063
GRAVY (calculated)
0.323
Length
502 amino acids
Sequence
(BLAST)
001: MAEGVGEPGS SMHGVTGREP TLAFETSPSV PTDATAKFAL PVDSEHKAKA FKLFSFANPH MRTFHLSWIS FFTCFVSTFA AAPLVPIIRD NLNLKKGDIG
101: NAGVASVSGA IFSRLMMGAV CDLLGPRYGC AFLIMLSAPT VFCMSLVSSA GGQIIGLANG TAAGWGNMGG GATQLIMPLV YDIIRKAGAT PFLAWRIAFF
201: IPGLMHVIMG ILVLVLGQDL PDGNLSTLQK KGNVAKDKFS KVLWYAVTNY RTWIFVLLYG YSMGVELTTD NVIAEYFYDR FDLNLRTAGI IAACFGMANI
301: VARPFGGFVS DFGARRYGMR ARLWNLWILQ TLGGAFCLWL GRANSLPISI FAMVCFSICA QAACGATFGI IPFISRRSLG IISGMSGAGG NFGSGLTQLL
401: FFTSTKYSTA TGLSLMGVMI MACTLPTAFV HFPQWGSMFL PPSNDAAKST EENYYVSEWS KAEREKGMHQ ASLKFAENSR SERGKRYVES APAPPDASPT
501: NV
Best Arabidopsis Sequence Match ( AT5G60770.1 )
(BLAST)
001: MADGFGEPGS SMHGVTGREQ SYAFSVESPA VPSDSSAKFS LPVDTEHKAK VFKLLSFEAP HMRTFHLAWI SFFTCFISTF AAAPLVPIIR DNLNLTRQDV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV
Arabidopsis Description
NRT2.4High affinity nitrate transporter 2.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.