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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72274 Canola plasma membrane 94.33 94.33
VIT_06s0061g00310.t01 Wine grape plasma membrane 52.41 74.3
CDY68730 Canola endoplasmic reticulum, plasma membrane 79.89 71.76
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 52.41 68.01
Bra031610.1-P Field mustard golgi, peroxisome, plasma membrane 100.0 66.73
CDY31024 Canola endoplasmic reticulum, plasma membrane 28.33 64.94
CDY26984 Canola plasma membrane 79.6 61.62
CDY22704 Canola cytosol, peroxisome, plasma membrane 79.6 60.69
CDY22703 Canola golgi, peroxisome, plasma membrane 86.12 60.56
CDY06299 Canola golgi, peroxisome, plasma membrane 86.12 60.08
CDY53125 Canola plastid 31.16 59.78
CDX93591 Canola golgi, peroxisome, plasma membrane 77.9 59.27
CDX93592 Canola golgi, peroxisome, plasma membrane 77.05 59.13
HORVU6Hr1G005720.1 Barley extracellular 63.17 58.84
CDY32821 Canola cytosol, peroxisome, plasma membrane 77.05 58.62
CDY06298 Canola golgi, peroxisome, plasma membrane 68.56 57.48
KRH30604 Soybean peroxisome 77.9 51.89
VIT_06s0061g00320.t01 Wine grape peroxisome 77.34 51.51
KRH22855 Soybean peroxisome 77.34 51.51
KRH26509 Soybean peroxisome 77.05 51.32
GSMUA_Achr11P... Banana cytosol 69.12 50.62
TraesCS6B01G044500.1 Wheat plastid 67.71 49.28
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 69.12 48.61
HORVU6Hr1G005590.1 Barley plasma membrane 69.12 48.13
TraesCS6D01G035900.1 Wheat plasma membrane 68.84 47.93
TraesCS6A01G031000.1 Wheat plasma membrane 68.84 47.93
TraesCS6A01G031100.1 Wheat plastid 68.56 47.73
TraesCS6A01G030700.1 Wheat plastid 68.56 47.73
TraesCS6A01G030900.1 Wheat plasma membrane 68.56 47.73
TraesCS6B01G044300.1 Wheat plasma membrane 68.56 47.73
TraesCS6B01G044200.1 Wheat plasma membrane 68.56 47.73
TraesCS6B01G044100.1 Wheat plastid 68.56 47.73
CDY31023 Canola endoplasmic reticulum, extracellular 11.33 47.62
TraesCS6A01G030800.1 Wheat plasma membrane 68.27 47.53
TraesCS6D01G035800.1 Wheat plasma membrane 68.27 47.53
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 62.04 47.51
CDY69111 Canola peroxisome 64.59 47.5
CDY50324 Canola plasma membrane 64.59 47.5
Os02t0112100-01 Rice golgi, plasma membrane, plastid 71.67 47.47
Os02t0112600-01 Rice golgi, plasma membrane, plastid 71.67 47.47
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 68.27 47.35
TraesCS6D01G035700.1 Wheat plasma membrane 67.99 47.34
TraesCS6B01G044000.1 Wheat plasma membrane 67.99 47.15
TraesCS6A01G031200.1 Wheat plasma membrane 67.99 47.15
TraesCS6D01G035600.1 Wheat plasma membrane 67.71 46.95
Zm00001d054060_P001 Maize plastid 68.27 45.99
Zm00001d054057_P001 Maize extracellular 68.27 45.99
EES06135 Sorghum golgi, peroxisome, plasma membrane 67.99 45.54
EES04351 Sorghum golgi, peroxisome, plasma membrane 67.99 45.54
CDX99169 Canola cytosol 9.63 45.33
HORVU6Hr1G005580.1 Barley plastid 68.84 44.59
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 63.17 43.9
TraesCS6A01G032400.1 Wheat plastid 63.17 43.9
TraesCS6B01G045700.1 Wheat plastid 62.89 43.87
TraesCS6B01G046600.1 Wheat plasma membrane 63.17 43.81
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 62.89 43.7
TraesCS6A01G032500.1 Wheat plastid 62.89 43.7
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 62.89 43.7
TraesCS6B01G046500.1 Wheat plasma membrane 62.61 43.59
TraesCS6D01G037800.1 Wheat plasma membrane 62.61 43.59
TraesCS2A01G074800.1 Wheat plasma membrane 61.76 43.43
TraesCS2D01G073500.1 Wheat plasma membrane 61.19 43.29
TraesCS6A01G033100.1 Wheat plasma membrane 62.04 43.11
TraesCS6D01G038200.1 Wheat plasma membrane 62.04 43.11
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 62.04 43.03
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 62.04 43.03
TraesCS6A01G032800.1 Wheat plasma membrane 61.76 43.0
TraesCS6D01G038300.1 Wheat plasma membrane 61.76 42.91
TraesCS6B01G046700.1 Wheat plasma membrane 61.76 42.91
TraesCS6B01G044400.1 Wheat plastid 68.56 42.83
TraesCS6A01G033000.1 Wheat plasma membrane 61.76 42.83
HORVU6Hr1G005770.1 Barley plasma membrane 61.76 42.83
TraesCS6D01G037900.1 Wheat plasma membrane 61.76 42.83
HORVU6Hr1G005930.1 Barley plasma membrane 61.47 42.72
TraesCS6D01G038000.1 Wheat plasma membrane 61.19 42.6
TraesCS6A01G033200.1 Wheat plasma membrane 60.91 42.32
Zm00001d014976_P001 Maize plasma membrane 61.76 41.76
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 52.41 41.48
EES04350 Sorghum plastid 62.32 41.12
CDY21075 Canola plasma membrane 56.37 39.88
CDY34599 Canola plasma membrane 55.81 39.56
CDX85593 Canola golgi, peroxisome, plasma membrane, plastid 40.23 29.34
CDX91044 Canola golgi, peroxisome, plasma membrane, plastid 39.94 28.09
HORVU6Hr1G005750.1 Barley cytosol, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY70994EnsemblPlantsGene:GSBRNA2T00010383001Gene3D:1.20.1250.20GO:A0A078JW53GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sfPANTHER:PTHR23515PANTHER:PTHR23515:SF3
ProteinID:CDY70994ProteinID:CDY70994.1SEG:segSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE5651
UniProt:A0A078JW53MapMan:24.2.2.10MapMan:25.1.3.1:::
Description
BnaAnng35750DBnaAnng35750D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JW53]
Coordinates
chrLK044059:-:1421..2886
Molecular Weight (calculated)
38493.7 Da
IEP (calculated)
9.164
GRAVY (calculated)
0.224
Length
353 amino acids
Sequence
(BLAST)
001: TMFNSQIIGL VNGTAAGWGN MGGGVTQLLM PIVYEIIRRC GATAFTAWRL AFFVPGWLHI IMGVLVLNLG QDLPDGNRSA LEKKGEVAKD KFGKIMWYAV
101: TNYRTWIFVL LYGYSMGVEL STDNVIAEYF FDRFHLKLHT AGIIAACFGM ANFFARPAGG YASDLAAKYF GMRGRLWALW IIQTAGGLFC VWLGRANTLV
201: TAVVAMVLFS LGAQAACGAT FAIVPFVSRR ALGIISGLTG AGGNFGSGLT QLIFFSTSRF TTEQGLTWMG VMIVACTLPV TLCHFPQWGS MFLPPSTDPV
301: KGTEEHYYAS EWNEQEKQKN LHQGSLRFAE NAKSEGGPRS RSATPPQNTP NNA
Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.