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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06299 Canola golgi, peroxisome, plasma membrane 95.22 94.47
CDY06298 Canola golgi, peroxisome, plasma membrane 74.3 88.6
CDY70994 Canola golgi, plasma membrane 60.56 86.12
CDY72274 Canola plasma membrane 60.36 85.84
CDX93592 Canola golgi, peroxisome, plasma membrane 77.69 84.78
CDY22704 Canola cytosol, peroxisome, plasma membrane 77.69 84.23
CDX93591 Canola golgi, peroxisome, plasma membrane 77.49 83.84
CDY32821 Canola cytosol, peroxisome, plasma membrane 76.69 82.97
CDY68730 Canola endoplasmic reticulum, plasma membrane 59.36 75.83
KRH30604 Soybean peroxisome 77.49 73.4
KRH22855 Soybean peroxisome 77.09 73.02
KRH26509 Soybean peroxisome 76.89 72.83
VIT_06s0061g00320.t01 Wine grape peroxisome 76.89 72.83
VIT_06s0061g00310.t01 Wine grape plasma membrane 35.06 70.68
TraesCS6A01G030900.1 Wheat plasma membrane 68.53 67.85
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 60.16 67.71
TraesCS6A01G031000.1 Wheat plasma membrane 68.33 67.65
TraesCS6D01G035900.1 Wheat plasma membrane 68.33 67.65
HORVU6Hr1G005590.1 Barley plasma membrane 68.33 67.65
TraesCS6B01G044200.1 Wheat plasma membrane 68.13 67.46
TraesCS6B01G044300.1 Wheat plasma membrane 68.13 67.46
TraesCS6A01G030700.1 Wheat plastid 68.13 67.46
TraesCS6A01G031200.1 Wheat plasma membrane 68.33 67.39
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 67.33 67.33
TraesCS6A01G031100.1 Wheat plastid 67.93 67.26
TraesCS6A01G030800.1 Wheat plasma membrane 67.93 67.26
TraesCS6D01G035700.1 Wheat plasma membrane 67.93 67.26
TraesCS6D01G035600.1 Wheat plasma membrane 68.13 67.19
TraesCS6B01G044000.1 Wheat plasma membrane 68.13 67.19
CDY26984 Canola plasma membrane 60.96 67.11
TraesCS6D01G035800.1 Wheat plasma membrane 67.73 67.06
TraesCS6B01G044100.1 Wheat plastid 67.73 67.06
Zm00001d054057_P001 Maize extracellular 69.92 66.98
Zm00001d054060_P001 Maize plastid 69.72 66.79
Os02t0112100-01 Rice golgi, plasma membrane, plastid 70.52 66.42
Os02t0112600-01 Rice golgi, plasma membrane, plastid 70.52 66.42
CDY31024 Canola endoplasmic reticulum, plasma membrane 20.32 66.23
EES04351 Sorghum golgi, peroxisome, plasma membrane 69.32 66.03
EES06135 Sorghum golgi, peroxisome, plasma membrane 69.12 65.84
GSMUA_Achr11P... Banana cytosol 62.75 65.35
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 65.94 65.03
HORVU6Hr1G005750.1 Barley cytosol, plastid 12.95 64.36
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 58.17 63.34
CDY50324 Canola plasma membrane 60.56 63.33
TraesCS2A01G074800.1 Wheat plasma membrane 62.95 62.95
HORVU6Hr1G005580.1 Barley plastid 68.13 62.75
TraesCS2D01G073500.1 Wheat plasma membrane 62.35 62.73
CDY69111 Canola peroxisome 59.96 62.71
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 33.86 62.5
TraesCS6D01G037800.1 Wheat plasma membrane 62.95 62.33
TraesCS6B01G046600.1 Wheat plasma membrane 63.15 62.28
TraesCS6B01G046500.1 Wheat plasma membrane 62.75 62.13
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 62.55 61.81
TraesCS6A01G032500.1 Wheat plastid 62.55 61.81
TraesCS6A01G032400.1 Wheat plastid 62.55 61.81
TraesCS6A01G033000.1 Wheat plasma membrane 62.55 61.69
TraesCS6D01G037900.1 Wheat plasma membrane 62.55 61.69
Zm00001d014976_P001 Maize plasma membrane 64.14 61.69
TraesCS6B01G045700.1 Wheat plastid 62.15 61.66
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 62.35 61.61
TraesCS6D01G038000.1 Wheat plasma membrane 62.15 61.54
TraesCS6A01G032800.1 Wheat plasma membrane 62.15 61.54
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 62.35 61.49
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 62.35 61.49
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 62.15 61.42
HORVU6Hr1G005770.1 Barley plasma membrane 61.95 61.1
TraesCS6D01G038300.1 Wheat plasma membrane 61.55 60.83
TraesCS6D01G038200.1 Wheat plasma membrane 61.55 60.83
TraesCS6B01G046700.1 Wheat plasma membrane 61.55 60.83
TraesCS6B01G044400.1 Wheat plastid 68.33 60.71
HORVU6Hr1G005930.1 Barley plasma membrane 61.35 60.63
TraesCS6A01G033100.1 Wheat plasma membrane 61.35 60.63
HORVU6Hr1G005720.1 Barley extracellular 45.62 60.42
EES04350 Sorghum plastid 64.34 60.37
TraesCS6A01G033200.1 Wheat plasma membrane 60.96 60.24
TraesCS6B01G044500.1 Wheat plastid 57.77 59.79
CDY53125 Canola plastid 21.51 58.7
CDY34599 Canola plasma membrane 57.77 58.23
CDY21075 Canola plasma membrane 57.77 58.12
CDX85593 Canola golgi, peroxisome, plasma membrane, plastid 42.63 44.21
CDX91044 Canola golgi, peroxisome, plasma membrane, plastid 42.03 42.03
CDY31023 Canola endoplasmic reticulum, extracellular 6.37 38.1
CDX99169 Canola cytosol 5.38 36.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.10MapMan:25.1.3.1GO:A0A078GDI6UniProt:A0A078GDI6EnsemblPlants:CDY22703
ProteinID:CDY22703ProteinID:CDY22703.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00019376001InterPro:IPR020846InterPro:MFSInterPro:MFS_dom
InterPro:MFS_trans_sfPFAM:PF07690PANTHER:PTHR23515PANTHER:PTHR23515:SF3SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI0004EC3B6BSEG:seg::::
Description
BnaC08g43370DBnaC08g43370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDI6]
Coordinates
chrLK032134:+:566886..568852
Molecular Weight (calculated)
54401.6 Da
IEP (calculated)
8.720
GRAVY (calculated)
0.465
Length
502 amino acids
Sequence
(BLAST)
001: MGDSIGDTGS SMHGVSTDKT GKYDLPVDLE DRATVFKLFS FAKPHMRTFH LSWISFSTCF VSTFAAAPLV PIIRENLNLT KQDVGNAGVA SVSGSIFSRL
101: VMGAVCDLLG PRYGCAFLVM LSAPTVFSMS FVSGAAGFIT VRFMIGFCLA TFVSCQYWMS TMFTSKIIGL VNGTAAGWGN MGGGITQLLM PVVYEIIRRC
201: GATAFTAWRI AFFVPGWLHI IMGILVLTLG QDLPGGNRNA VEKKGKVVQD KLGKIMWCAV SNYRTWIFVL LYGYSMGVEL STDNVIAEYF FDRFHLKLHT
301: AGIIAASFGM ANFFARPAGG YASDLAAKYF GMRGRLWALW IIQTAGGLFC VWLGRANTLV TAVVAMILFS LGAQAACGAT FAIVPFVSRR ALGIISGLTG
401: AGGNFGSGLT QLIFFSTSRF TTEQGLTWMG VMIVACTLPV TLCHFPQWGS MFLPPSTVTT EQYYVSEWSE EEKEKNMHLG SLAFAKDAES EGGRRAQSTI
501: IV
Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.