Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34599 | Canola | plasma membrane | 98.8 | 99.0 |
| AT1G12940.1 | Thale cress | plasma membrane | 90.78 | 90.24 |
| VIT_01s0127g00070.t01 | Wine grape | plasma membrane | 74.15 | 73.27 |
| KRG99396 | Soybean | plasma membrane | 73.95 | 72.35 |
| KRH45628 | Soybean | plasma membrane | 73.55 | 72.24 |
| Bra016747.1-P | Field mustard | plasma membrane | 83.17 | 72.17 |
| PGSC0003DMT400043794 | Potato | plasma membrane | 71.54 | 71.4 |
| GSMUA_Achr4P06400_001 | Banana | plasma membrane | 64.53 | 70.0 |
| GSMUA_Achr4P13270_001 | Banana | plasma membrane | 62.12 | 67.54 |
| EES01339 | Sorghum | plasma membrane | 67.33 | 65.24 |
| TraesCS3D01G254900.1 | Wheat | plasma membrane | 66.93 | 64.98 |
| TraesCS3B01G285900.1 | Wheat | plasma membrane | 66.73 | 64.79 |
| TraesCS3A01G254000.1 | Wheat | plasma membrane | 66.33 | 64.4 |
| Zm00001d011679_P001 | Maize | plasma membrane | 66.73 | 64.04 |
| HORVU3Hr1G066090.1 | Barley | plasma membrane | 65.73 | 63.81 |
| Os01t0704100-02 | Rice | plasma membrane | 65.93 | 63.76 |
| TraesCSU01G002800.1 | Wheat | plasma membrane | 64.13 | 62.14 |
| TraesCS1D01G035700.1 | Wheat | plasma membrane | 63.33 | 61.0 |
| CDY22703 | Canola | golgi, peroxisome, plasma membrane | 58.12 | 57.77 |
| CDY06298 | Canola | golgi, peroxisome, plasma membrane | 48.5 | 57.48 |
| CDY06299 | Canola | golgi, peroxisome, plasma membrane | 57.92 | 57.11 |
| CDY72274 | Canola | plasma membrane | 40.28 | 56.94 |
| CDY68730 | Canola | endoplasmic reticulum, plasma membrane | 44.69 | 56.74 |
| CDX93591 | Canola | golgi, peroxisome, plasma membrane | 52.51 | 56.47 |
| CDY70994 | Canola | golgi, plasma membrane | 39.88 | 56.37 |
| CDY22704 | Canola | cytosol, peroxisome, plasma membrane | 52.1 | 56.16 |
| CDX93592 | Canola | golgi, peroxisome, plasma membrane | 51.5 | 55.87 |
| CDY31024 | Canola | endoplasmic reticulum, plasma membrane | 17.23 | 55.84 |
| CDY32821 | Canola | cytosol, peroxisome, plasma membrane | 51.7 | 55.6 |
| CDY50324 | Canola | plasma membrane | 50.5 | 52.5 |
| CDY69111 | Canola | peroxisome | 50.3 | 52.29 |
| CDY26984 | Canola | plasma membrane | 46.29 | 50.66 |
| CDX85593 | Canola | golgi, peroxisome, plasma membrane, plastid | 48.7 | 50.21 |
| CDY53125 | Canola | plastid | 18.44 | 50.0 |
| CDX91044 | Canola | golgi, peroxisome, plasma membrane, plastid | 48.5 | 48.21 |
| CDY31023 | Canola | endoplasmic reticulum, extracellular | 7.41 | 44.05 |
| CDX99169 | Canola | cytosol | 6.01 | 40.0 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | GO:A0A078G3N2 | UniProt:A0A078G3N2 | EnsemblPlants:CDY21075 |
| ProteinID:CDY21075 | ProteinID:CDY21075.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00015247001 | InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | PFAM:PF07690 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | SUPFAM:SSF103473 | TMHMM:TMhelix |
| UniParc:UPI0004EE6461 | SEG:seg | : | : | : | : |
Description
BnaA08g24500DBnaA08g24500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3N2]
Coordinates
chrLK032115:+:564205..565975
Molecular Weight (calculated)
54177.8 Da
IEP (calculated)
8.919
GRAVY (calculated)
0.348
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVEGKGEES RTTTTTRRFA LPVDSENKST TFRLFSVAKP HMRAFHLSWF QFFCCFVSTF AAPPLLPVIR ENLNLTATDI GNAGIASVSG SVFARLVMGT
101: ACDLFGPRLA SAALTLSTAP AVYFTAGIKS PIGFIMVRFF AGFSLATFVS TQFWMSSMFS GPVVGSANGI AAGWGNLGGG ATQLIMPLVF SVIRQMGATK
201: FTAWRIAFFI PGLFQTFSAF AVLLFGQDLP DGDYWAMHKS GEKEKDEVGK VITHGITNYR GWITALAYGY CFGVELTIDN IIAEYFFDRF HLNLNTAGII
301: AASFGLANFF ARPGGGILSD LMARRFGMRG RLWSWWIIQT LGGVLCASLG QIDSLTGSIV VMLIFSVFVQ ASCGLTFGVV PFISRRSLGV ISGMTGAGGN
401: VGAVLTQLIF FKGSTYSRET GITLMGIMSI ACTLPICLIY FPQWGGMFCG PSSKKVTEEE YYLAEWSSKE KEKNLHLSSQ KFAENSVSER GRATTHPQS
101: ACDLFGPRLA SAALTLSTAP AVYFTAGIKS PIGFIMVRFF AGFSLATFVS TQFWMSSMFS GPVVGSANGI AAGWGNLGGG ATQLIMPLVF SVIRQMGATK
201: FTAWRIAFFI PGLFQTFSAF AVLLFGQDLP DGDYWAMHKS GEKEKDEVGK VITHGITNYR GWITALAYGY CFGVELTIDN IIAEYFFDRF HLNLNTAGII
301: AASFGLANFF ARPGGGILSD LMARRFGMRG RLWSWWIIQT LGGVLCASLG QIDSLTGSIV VMLIFSVFVQ ASCGLTFGVV PFISRRSLGV ISGMTGAGGN
401: VGAVLTQLIF FKGSTYSRET GITLMGIMSI ACTLPICLIY FPQWGGMFCG PSSKKVTEEE YYLAEWSSKE KEKNLHLSSQ KFAENSVSER GRATTHPQS
001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
Arabidopsis Description
NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.