CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45628	Soybean	plasma membrane	96.27	96.65
VIT_01s0127g00070.t01	Wine grape	plasma membrane	79.02	79.8
PGSC0003DMT400043794	Potato	plasma membrane	73.92	75.4
CDY21075	Canola	plasma membrane	72.35	73.95
CDY34599	Canola	plasma membrane	72.16	73.9
AT1G12940.1	Thale cress	plasma membrane	71.96	73.11
GSMUA_Achr4P06400_001	Banana	plasma membrane	64.9	71.96
GSMUA_Achr4P13270_001	Banana	plasma membrane	63.33	70.37
EES01339	Sorghum	plasma membrane	68.82	68.16
Zm00001d011679_P001	Maize	plasma membrane	69.41	68.08
TraesCS3A01G254000.1	Wheat	plasma membrane	67.25	66.73
TraesCS3B01G285900.1	Wheat	plasma membrane	67.06	66.54
TraesCS3D01G254900.1	Wheat	plasma membrane	67.06	66.54
HORVU3Hr1G066090.1	Barley	plasma membrane	66.86	66.34
TraesCSU01G002800.1	Wheat	plasma membrane	66.27	65.63
Os01t0704100-02	Rice	plasma membrane	66.08	65.31
TraesCS1D01G035700.1	Wheat	plasma membrane	66.08	65.06
KRH22855	Soybean	peroxisome	62.94	60.57
KRH30604	Soybean	peroxisome	62.55	60.19
KRH26509	Soybean	peroxisome	62.55	60.19
KRH25078	Soybean	peroxisome, plasma membrane, plastid, vacuole	49.8	56.95
Bra016747.1-P	Field mustard	plasma membrane	60.39	53.57

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100787888	MapMan:24.2.2.10	MapMan:25.1.3.1	EMBL:ACUP02011045	EnsemblPlantsGene:GLYMA_18G141900
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987
GO:GO:0015112	GO:GO:0015706	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0071249
UniProt:I1N1J4	InterPro:IPR020846	EnsemblPlants:KRG99396	ProteinID:KRG99396	ProteinID:KRG99396.1	InterPro:MFS
InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI000233E9BA	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:22053882..22057005

Molecular Weight (calculated)

55515.8 Da

IEP (calculated)

9.554

GRAVY (calculated)

0.400

Length

510 amino acids

Sequence
(BLAST)

001: MDLELPAHAA TVNESQQQKF ALPVDSENKA TVFRLFSFAK PHMRAFHLSW VSFFACFVSS FAAPPLLPII RDNLNLTATD IGNAGVASVS GAVFARIAMG
101: TACDLVGPRL ASASLILLTA PFVYFTSIIN SATSYLLVRF FTGFSLATFV STQFWMSSMF SAPVVGSANG LSGGWGNLGG GATQLIMPLV FSLIRDIGAT
201: KFTAWRIAFF VPAMFQMLTA FSILIFGQDM PDGNFRRLKK SGEKAKDDFS RVLYHGVTNY RGWILALTYG YCFGVELTID NIIAEYFYDR FNLKLHTAGI
301: IAASFGLANI FSRPGGGYIS DVMAKRFGMR GRLWALWICQ TLAGVFCIIL GLVGSLSVSV VVMIIFSVFV QAACGMTFGI VPFVSRRSLG VISGMTGGGG
401: NVGAVVTQLI FFKGSKFSKE RGITLMGAMI IICTLPICLI YFPQWGGMFS GPSSKKVTEE DYYLAEWNSK EKEKGSHHAS LKFADNSRSE RGRKLNASTE
501: PTEEITPPHV

Best Arabidopsis Sequence Match ( AT1G12940.1 )
(BLAST)

001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT

Arabidopsis Description

NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.