Factsheet for TraesCS3D01G254900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G285900.1	Wheat	plasma membrane	99.61	99.61
TraesCS3A01G254000.1	Wheat	plasma membrane	98.25	98.25
HORVU3Hr1G066090.1	Barley	plasma membrane	96.89	96.89
TraesCS1D01G035700.1	Wheat	plasma membrane	89.11	88.42
EES01339	Sorghum	plasma membrane	87.16	86.99
Zm00001d011679_P001	Maize	plasma membrane	86.19	85.19
Os01t0704100-02	Rice	plasma membrane	82.88	82.56
GSMUA_Achr4P13270_001	Banana	plasma membrane	67.32	75.38
GSMUA_Achr4P06400_001	Banana	plasma membrane	65.95	73.7
PGSC0003DMT400043794	Potato	plasma membrane	67.12	69.0
VIT_01s0127g00070.t01	Wine grape	plasma membrane	66.93	68.12
KRG99396	Soybean	plasma membrane	66.54	67.06
CDY21075	Canola	plasma membrane	64.98	66.93
CDY34599	Canola	plasma membrane	64.59	66.67
KRH45628	Soybean	plasma membrane	64.59	65.35
AT1G12940.1	Thale cress	plasma membrane	63.42	64.94
TraesCS6D01G035900.1	Wheat	plasma membrane	55.25	56.02
TraesCS6D01G035700.1	Wheat	plasma membrane	55.06	55.82
TraesCS6D01G035800.1	Wheat	plasma membrane	55.06	55.82
TraesCS6D01G037800.1	Wheat	plasma membrane	53.11	53.85
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	53.31	53.83
TraesCS6D01G037900.1	Wheat	plasma membrane	53.11	53.63
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	52.92	53.54
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	52.92	53.54
TraesCS6D01G038300.1	Wheat	plasma membrane	52.92	53.54
TraesCS6D01G038000.1	Wheat	plasma membrane	52.53	53.25
TraesCS6D01G035600.1	Wheat	plasma membrane	52.72	53.24
TraesCS6D01G038200.1	Wheat	plasma membrane	52.53	53.15
TraesCS2D01G073500.1	Wheat	plasma membrane	50.58	52.1
Bra016747.1-P	Field mustard	plasma membrane	56.03	50.09
TraesCS7D01G420900.1	Wheat	golgi, peroxisome, plasma membrane	41.44	44.1

Protein Annotations

EnsemblPlants:TraesCS3D01G254900.1	EnsemblPlantsGene:TraesCS3D01G254900	Gene3D:1.20.1250.20	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom
InterPro:MFS_trans_sf	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	PFAM:PF07690	PFscan:PS50850	SEG:seg
SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.10	MapMan:25.1.3.1	:

Description

No Description!

Coordinates

chr3D:-:356623041..356624585

Molecular Weight (calculated)

55366.1 Da

IEP (calculated)

8.535

GRAVY (calculated)

0.382

Length

514 amino acids

Sequence
(BLAST)

001: MEGESKPAAM GVQAASKGKF RIPVDSDNKA TEFWLFSFAR PHMSAFHLSW FSFFCCFVST FAAPPLLPLI RDNLGLTGKD IGNAGIASVS GAVFARLAMG
101: TACDLVGPRL ASAAIILLTT PAVYCSAIID SASSFLLVRF FTGFSLASFV STQFWMSSMF SSPKVGLANG VAGGWGNLGG GAVQFIMPLV FEVVRKIGST
201: DFVAWRVAFF IPGIMQTFSA IAVLAFGQDM PDGNYRKLHK SGEMHKDSFG NVLRHAVTNY RAWILALTYG YCFGVELAVD NIVAQYFYDR FDVNLHTAGL
301: IAASFGMANI ISRPGGGLMS DWLSDRFGMR GRLWGLWIVQ TIGGILCVVL GVVDYSFGAS VAVMILFSFF VQAACGLTFG IVPFVSRRSL GLISGMTGGG
401: GNVGAVLTQV IFFRGTTYKT ETGIMYMGLM ILACTLPITL IYFPQWGGMF AGPRKGATAE EYYSQEWTEE ERAKGYSAAT ERFAENSVRE GGRRATSGSQ
501: SRHTVPVDGS PADV

Best Arabidopsis Sequence Match ( AT1G12940.1 )
(BLAST)

001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT

Arabidopsis Description

NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.