Factsheet for GSMUA_Achr4P06400_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P13270_001	Banana	plasma membrane	84.57	84.75
VIT_01s0127g00070.t01	Wine grape	plasma membrane	73.26	66.73
TraesCS3A01G254000.1	Wheat	plasma membrane	74.57	66.73
Os01t0704100-02	Rice	plasma membrane	74.13	66.09
TraesCS3D01G254900.1	Wheat	plasma membrane	73.7	65.95
TraesCS3B01G285900.1	Wheat	plasma membrane	73.7	65.95
HORVU3Hr1G066090.1	Barley	plasma membrane	73.7	65.95
EES01339	Sorghum	plasma membrane	73.7	65.83
Zm00001d011679_P001	Maize	plasma membrane	73.7	65.19
KRG99396	Soybean	plasma membrane	71.96	64.9
TraesCSU01G002800.1	Wheat	plasma membrane	72.61	64.85
CDY34599	Canola	plasma membrane	70.0	64.66
PGSC0003DMT400043794	Potato	plasma membrane	70.22	64.6
CDY21075	Canola	plasma membrane	70.0	64.53
TraesCS1D01G035700.1	Wheat	plasma membrane	72.61	64.48
AT1G12940.1	Thale cress	plasma membrane	68.91	63.15
KRH45628	Soybean	plasma membrane	69.35	62.8
GSMUA_Achr8P14230_001	Banana	golgi, peroxisome, plasma membrane	59.13	54.18
GSMUA_Achr11P...	Banana	cytosol	55.87	53.32
GSMUA_Achr1P25450_001	Banana	plasma membrane	52.83	52.26
Bra016747.1-P	Field mustard	plasma membrane	58.26	46.61

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr4G06400_001	EnsemblPlants:GSMUA_Achr4P06400_001	EnsemblPlants:GSMUA_Achr4T06400_001
InterPro:IPR020846	UniProt:M0SLK7	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690
PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000296D5A3	SEG:seg

Description

Putative Nitrate transporter [Source:GMGC_GENE;Acc:GSMUA_Achr4G06400_001]

Coordinates

chr4:-:4852115..4853779

Molecular Weight (calculated)

49658.8 Da

IEP (calculated)

8.532

GRAVY (calculated)

0.190

Length

460 amino acids

Sequence
(BLAST)

001: MEDSGKPSLH VESSAAEGSH FKLPVDSEQK ATEFWLFSFA KPHMRAFHLS WFSFFCCFVS TFAAPPLLPL IRDNLNLTTT DIGNAGIASV SGAVFARLAM
101: GTACDLIGPR LASASLTLLT APAVYFTSVI NSASSSMFSP PVVGVANGIA GGWGNLGGGA TQLIMPLVYD LIHHIGSTNF TAWRIAFFIP GFMQTISAIA
201: VIALGQDLPN GNYRKLEKAG DKHKDSFRKV FYHAVTNYRG WILALTYGYC FGVELTIDNI VAEYFYDKFN VNLRTAGIIA ASFGLANIIS RPGGGLLSDW
301: MSRRYGMRGR LWGLWVVQIV GGAACGLTFG VVPFVSRRSL GMISGMTGGG GNVGAVITQL IFFKGSKYSK ETGITLMGVM ILCCTLPITL IYFPQWGGLF
401: CGPRPKATAE DYYAAEWSED EKERGYHSAS VKFAENSVRE GGRRRDSSPA VPADDTPSHA

Best Arabidopsis Sequence Match ( AT1G12940.1 )
(BLAST)

001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT

Arabidopsis Description

NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.