Factsheet for Bra016747.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21075	Canola	plasma membrane	72.17	83.17
CDY34599	Canola	plasma membrane	71.83	82.93
AT1G12940.1	Thale cress	plasma membrane	67.48	77.29
VIT_01s0127g00070.t01	Wine grape	plasma membrane	53.91	61.39
PGSC0003DMT400043794	Potato	plasma membrane	53.22	61.2
KRH45628	Soybean	plasma membrane	53.57	60.63
KRG99396	Soybean	plasma membrane	53.57	60.39
GSMUA_Achr4P06400_001	Banana	plasma membrane	46.61	58.26
EES01339	Sorghum	plasma membrane	50.78	56.7
GSMUA_Achr4P13270_001	Banana	plasma membrane	44.87	56.21
TraesCS3D01G254900.1	Wheat	plasma membrane	50.09	56.03
TraesCS3B01G285900.1	Wheat	plasma membrane	50.09	56.03
TraesCS3A01G254000.1	Wheat	plasma membrane	49.91	55.84
Zm00001d011679_P001	Maize	plasma membrane	50.26	55.58
HORVU3Hr1G066090.1	Barley	plasma membrane	49.39	55.25
Os01t0704100-02	Rice	plasma membrane	49.57	55.23
TraesCSU01G002800.1	Wheat	plasma membrane	48.7	54.37
TraesCS1D01G035700.1	Wheat	plasma membrane	48.0	53.28
Bra018656.1-P	Field mustard	golgi, peroxisome, plasma membrane	42.61	50.31
Bra034142.1-P	Field mustard	plasma membrane	13.39	50.0
Bra031611.1-P	Field mustard	golgi, peroxisome, plasma membrane	43.3	49.21
Bra018655.1-P	Field mustard	golgi, peroxisome, plasma membrane	42.26	48.5
Bra031610.1-P	Field mustard	golgi, peroxisome, plasma membrane	44.35	48.2
Bra030713.1-P	Field mustard	golgi, peroxisome, plasma membrane	44.0	47.74
Bra002453.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	43.13	47.06
Bra023475.1-P	Field mustard	plastid	37.22	44.21
Bra020230.1-P	Field mustard	peroxisome	37.39	44.06
Bra037625.1-P	Field mustard	peroxisome	41.39	43.99
Bra038302.1-P	Field mustard	peroxisome	41.04	43.87
Bra002451.1-P	Field mustard	golgi, peroxisome, plasma membrane	40.87	43.84
Bra037626.1-P	Field mustard	peroxisome	41.57	43.77
Bra038301.1-P	Field mustard	golgi, peroxisome, plasma membrane	40.7	43.09

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:24.2.4.1.1	MapMan:25.1.3.1	EnsemblPlantsGene:Bra016747	EnsemblPlants:Bra016747.1
EnsemblPlants:Bra016747.1-P	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0015706
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:IPR020846	UniProt:M4DJR9	InterPro:MATE_fam
InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF01554	PFAM:PF07690	PANTHER:PTHR23515
PANTHER:PTHR23515:SF3	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002546030	SEG:seg	:

Description

AT1G12940 (E=5e-187) ATNRT2.5 | ATNRT2.5 (nitrate transporter2.5); nitrate transmembrane transporter

Coordinates

chrA08:-:19790411..19796761

Molecular Weight (calculated)

62622.7 Da

IEP (calculated)

7.691

GRAVY (calculated)

0.578

Length

575 amino acids

Sequence
(BLAST)

001: MDVEGKGEES RTTTTTRRFA LPVDSENKST TFRLFSVAKP HMRAFHLSWF QFFCCFVSTF AAPPLLPVIR ENLNLTATDI GNAGIASVSG SVFARLVMGT
101: ACDLFGPRLA SAALTLSTAP AVYFTAGIKS PIGFIMVRFF AGFSLATFVS TQFWMSSMFS GPVVGSANGI AAGWGNLGGG ATQLIMPLVF SVIRQMGATK
201: FTAWRIAFFI PGLFQTFSAF AVLLFGQDLP DGDYWAMHKS GEKEKDEVGK VITHGITNYR GWITALAYGY CFGVELTIDN IIAEYFFDRF HLNLNTAGII
301: AASFGLANFF ARPGGGILSD LMARRFGMRG RLWSWWIIQT LGGVLCASLG QIDSLTGSIV VMLIFSVFVQ ASCGLTFGVV PFISRSMNIL GWAVMVSVGI
401: NAAVSVRVSN ELGASHPRTA KFSLVVAVIV STAFGMLIAA VLLFFQDEYP VLFVEDEVVR NVVRELTPML AFCIVINNVQ PVLSGVAVGA GWQAVVAYVN
501: IACYYLFGIP FGLLLGFKLE YGVMGIWWGM MTGTFVQSII LTWMICTTNW AKEAAMAEER IREWGGETEK ETLLN

Best Arabidopsis Sequence Match ( AT1G12940.1 )
(BLAST)

001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT

Arabidopsis Description

NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.