Factsheet for Bra038301.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99169	Canola	cytosol	13.44	97.33
CDY31023	Canola	endoplasmic reticulum, extracellular	14.55	94.05
Bra037626.1-P	Field mustard	peroxisome	90.06	89.56
CDY31024	Canola	endoplasmic reticulum, plasma membrane	24.86	87.66
Bra034142.1-P	Field mustard	plasma membrane	24.68	87.01
Bra037625.1-P	Field mustard	peroxisome	81.4	81.7
Bra038302.1-P	Field mustard	peroxisome	79.93	80.67
Bra002451.1-P	Field mustard	golgi, peroxisome, plasma membrane	79.37	80.41
Bra020230.1-P	Field mustard	peroxisome	71.64	79.71
KRH26509	Soybean	peroxisome	71.64	73.4
VIT_06s0061g00320.t01	Wine grape	peroxisome	71.45	73.21
KRH22855	Soybean	peroxisome	71.45	73.21
KRH30604	Soybean	peroxisome	71.09	72.83
Bra002453.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	70.35	72.49
HORVU6Hr1G005750.1	Barley	cytosol, plastid	13.44	72.28
VIT_06s0061g00310.t01	Wine grape	plasma membrane	32.6	71.08
Bra030713.1-P	Field mustard	golgi, peroxisome, plasma membrane	67.96	69.62
GSMUA_Achr8P14230_001	Banana	golgi, peroxisome, plasma membrane	64.27	69.52
Bra031610.1-P	Field mustard	golgi, peroxisome, plasma membrane	67.22	69.0
Solyc06g010250.2.1	Tomato	plasma membrane	62.98	68.67
GSMUA_Achr11P...	Banana	cytosol	60.96	68.67
Bra018656.1-P	Field mustard	golgi, peroxisome, plasma membrane	61.51	68.58
PGSC0003DMT400050654	Potato	plasma membrane	66.3	68.57
Bra031611.1-P	Field mustard	golgi, peroxisome, plasma membrane	63.72	68.38
Bra018655.1-P	Field mustard	golgi, peroxisome, plasma membrane	62.98	68.26
Solyc11g069750.1.1	Tomato	extracellular	65.75	68.0
PGSC0003DMT400040689	Potato	plasma membrane	65.38	67.75
KRH25078	Soybean	peroxisome, plasma membrane, plastid, vacuole	55.43	67.49
EES04351	Sorghum	golgi, peroxisome, plasma membrane	63.9	65.84
EES06135	Sorghum	golgi, peroxisome, plasma membrane	63.9	65.84
HORVU6Hr1G005590.1	Barley	plasma membrane	61.14	65.48
TraesCS6D01G035600.1	Wheat	plasma membrane	61.33	65.42
TraesCS6B01G044300.1	Wheat	plasma membrane	60.96	65.29
TraesCS6D01G035700.1	Wheat	plasma membrane	60.96	65.29
TraesCS6D01G035900.1	Wheat	plasma membrane	60.96	65.29
TraesCS6A01G031100.1	Wheat	plastid	60.96	65.29
TraesCS6B01G044000.1	Wheat	plasma membrane	61.14	65.23
TraesCS6A01G031000.1	Wheat	plasma membrane	60.77	65.09
TraesCS6B01G044200.1	Wheat	plasma membrane	60.77	65.09
TraesCS6D01G035800.1	Wheat	plasma membrane	60.77	65.09
TraesCS6A01G030900.1	Wheat	plasma membrane	60.77	65.09
TraesCS6A01G030700.1	Wheat	plastid	60.77	65.09
Zm00001d054057_P001	Maize	extracellular	62.8	65.08
Zm00001d054060_P001	Maize	plastid	62.8	65.08
TraesCS6A01G030800.1	Wheat	plasma membrane	60.59	64.89
TraesCS6B01G044100.1	Wheat	plastid	60.59	64.89
TraesCS6A01G031200.1	Wheat	plasma membrane	60.77	64.83
Os02t0112600-01	Rice	golgi, plasma membrane, plastid	63.54	64.73
Os02t0112100-01	Rice	golgi, plasma membrane, plastid	63.54	64.73
TraesCS6B01G046600.1	Wheat	plasma membrane	60.41	64.44
HORVU6Hr1G005780.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	54.7	64.43
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	60.04	64.17
TraesCS6A01G032400.1	Wheat	plastid	59.85	63.98
TraesCS6D01G037800.1	Wheat	plasma membrane	59.67	63.91
TraesCS6A01G032900.1	Wheat	golgi, plasma membrane, vacuole	59.85	63.85
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	59.67	63.78
TraesCS6B01G045600.1	Wheat	golgi, plasma membrane, vacuole	59.67	63.78
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	59.67	63.65
TraesCS6D01G037900.1	Wheat	plasma membrane	59.67	63.65
HORVU6Hr1G005930.1	Barley	plasma membrane	59.3	63.39
TraesCS6A01G032500.1	Wheat	plastid	59.3	63.39
HORVU6Hr1G005600.2	Barley	endoplasmic reticulum	59.3	63.26
TraesCS6D01G038200.1	Wheat	plasma membrane	59.12	63.19
TraesCS6B01G046500.1	Wheat	plasma membrane	58.93	63.12
HORVU6Hr1G005770.1	Barley	plasma membrane	59.12	63.06
TraesCS6A01G033000.1	Wheat	plasma membrane	59.12	63.06
TraesCS6D01G038300.1	Wheat	plasma membrane	58.93	62.99
TraesCS6D01G038000.1	Wheat	plasma membrane	58.75	62.92
TraesCS6A01G032800.1	Wheat	plasma membrane	58.75	62.92
TraesCS6B01G045700.1	Wheat	plastid	58.56	62.85
TraesCS6A01G033100.1	Wheat	plasma membrane	58.75	62.8
TraesCS6B01G046700.1	Wheat	plasma membrane	58.56	62.6
TraesCS6A01G033200.1	Wheat	plasma membrane	58.56	62.6
EES04350	Sorghum	plastid	60.59	61.5
HORVU6Hr1G005720.1	Barley	extracellular	42.73	61.21
TraesCS2A01G074800.1	Wheat	plasma membrane	56.54	61.16
TraesCS2D01G073500.1	Wheat	plasma membrane	56.17	61.12
HORVU6Hr1G005580.1	Barley	plastid	61.33	61.1
HORVU6Hr1G005570.1	Barley	golgi, plasma membrane	30.57	61.03
Zm00001d014976_P001	Maize	plasma membrane	58.56	60.92
TraesCS6B01G044400.1	Wheat	plastid	61.51	59.12
TraesCS6B01G044500.1	Wheat	plastid	52.49	58.76
AT4G14358.1	Thale cress	cytosol	7.0	43.68
Bra023475.1-P	Field mustard	plastid	37.94	42.56
Bra016747.1-P	Field mustard	plasma membrane	43.09	40.7

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	EnsemblPlantsGene:Bra038301	EnsemblPlants:Bra038301.1	EnsemblPlants:Bra038301.1-P
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR020846	UniProt:M4FB35	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690
PFscan:PS50850	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000253EF01
SEG:seg	:	:	:	:	:

Description

AT3G45060 (E=8e-254) ATNRT2.6, NRT2.6 | ATNRT2.6; nitrate transmembrane transporter

Coordinates

chrA06:+:11608821..11611760

Molecular Weight (calculated)

59093.6 Da

IEP (calculated)

7.370

GRAVY (calculated)

0.333

Length

543 amino acids

Sequence
(BLAST)

001: MAHRNEEEGS IGTSMHGVTA KEHVFSFSDQ GEDAWSSHSV QSDDPTAMFA FPVDSEHKAK VFKPLSFAKP HMRAFHLGWI SFFTCFISTF AAAPLVPIIR
101: DNLDLTKTDI GNAGVASVSG AIFSRLAMGA VCDLLGARYG TAFLLMLSAP AVFSMSFVAD AGGYLSVRFM IGFCLATFVS CSYWTSVMFT GKIIGLVNGC
201: AGGWGDMGGG VTQLLMPMVF HIIKVAGATP FTAWRIAFFI PGFLQVIMGI LVLTLGQDFP DGNLSTLQKK GDVSKDKLTK VFWYALRNYR TYVLFILYGF
301: SMGIEMTINN VISEYFFDRF QLELHTAGMI AASFGMANFF ARPIGGFASD VSARFFGMRG RLWTLWILQT SGGLFCVWLG RATSLPIAIL AMMLFSFGVQ
401: AACGAIFGIV PFVSRRSLGI ISGLTGAGGN FGSGLTQLPF FSSSRFHTAD GLSLMGITAM IFTLLVAFIH FPQWGSMFLG PTSDNRTSKE EHYYVAEWTE
501: EEKLQGLHEG SLKFAENSRS ERGKKAAPDG TSTPLENENP ANV

Best Arabidopsis Sequence Match ( AT3G45060.1 )
(BLAST)

001: MAHNHSNEDG SIGTSLHGVT AREQVFSFSV QEDVPSSQAV RTNDPTAKFA LPVDSEHRAK VFKPLSFAKP HMRAFHLGWI SFFTCFISTF AAAPLVPVIR
101: DNLDLTKTDI GNAGVASVSG AIFSRLAMGA VCDLLGARYG TAFSLMLTAP AVFSMSFVAD AGSYLAVRFM IGFCLATFVS CQYWTSVMFT GKIIGLVNGC
201: AGGWGDMGGG VTQLLMPMVF HVIKLTGATP FTAWRFAFFI PGILQIVMGI LVLTLGQDLP DGNLSTLQKS GQVSKDKFSK VFWFAVKNYR TWILFMLYGF
301: SMGVELTINN VISGYFYDRF NLTLHTAGII AASFGMANFF ARPFGGYASD VAARLFGMRG RLWILWILQT VGALFCIWLG RASSLPIAIL AMMLFSMGTQ
401: AACGALFGVA PFVSRRSLGL ISGLTGAGGN FGSGVTQLLF FSSSRFSTAE GLSLMGVMAV VCSLPVAFIH FPQWGSMFLR PSQDGEKSKE EHYYGAEWTE
501: EEKSLGLHEG SIKFAENSRS ERGRKAMLAD IPTPETGSPA HV

Arabidopsis Description

NRT2.6High affinity nitrate transporter 2.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXH0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.