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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d003287_P001
Zm00001d017095_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G08090.1 Zm00001d003287_P001 AT5G50200.1 17012411
AT1G08090.1 Zm00001d017095_P001 AT5G50200.1 17012411
AT5G60780.1 Zm00001d003287_P001 AT5G50200.1 17012411
AT5G60780.1 Zm00001d017095_P001 AT5G50200.1 17012411
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES04350 Sorghum plastid 91.19 88.97
TraesCS6A01G030900.1 Wheat plasma membrane 76.25 78.5
TraesCS6A01G030800.1 Wheat plasma membrane 76.05 78.3
TraesCS6A01G031000.1 Wheat plasma membrane 75.86 78.11
TraesCS6B01G044200.1 Wheat plasma membrane 75.86 78.11
TraesCS6D01G035900.1 Wheat plasma membrane 75.86 78.11
TraesCS6A01G030700.1 Wheat plastid 75.67 77.91
TraesCS6D01G035700.1 Wheat plasma membrane 75.67 77.91
HORVU6Hr1G005590.1 Barley plasma membrane 75.48 77.71
TraesCS6B01G044300.1 Wheat plasma membrane 75.48 77.71
TraesCS6D01G035800.1 Wheat plasma membrane 75.48 77.71
TraesCS6A01G031100.1 Wheat plastid 75.29 77.51
TraesCS6B01G044100.1 Wheat plastid 75.29 77.51
HORVU6Hr1G005750.1 Barley cytosol, plastid 14.94 77.23
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 40.04 76.84
Zm00001d054060_P001 Maize plastid 76.82 76.53
Zm00001d054057_P001 Maize extracellular 76.63 76.34
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 67.24 76.14
TraesCS6A01G031200.1 Wheat plasma membrane 74.14 76.03
TraesCS6D01G035600.1 Wheat plasma membrane 74.14 76.03
TraesCS6B01G044000.1 Wheat plasma membrane 73.95 75.83
TraesCS6A01G032400.1 Wheat plastid 72.41 74.41
TraesCS6B01G046500.1 Wheat plasma membrane 72.22 74.36
TraesCS6A01G033000.1 Wheat plasma membrane 72.22 74.07
TraesCS6D01G037800.1 Wheat plasma membrane 71.84 73.96
HORVU6Hr1G005930.1 Barley plasma membrane 71.84 73.82
TraesCS6A01G033200.1 Wheat plasma membrane 71.84 73.82
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 71.84 73.82
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 71.84 73.82
TraesCS6D01G038200.1 Wheat plasma membrane 71.84 73.82
TraesCS6D01G038300.1 Wheat plasma membrane 71.84 73.82
TraesCS6A01G032800.1 Wheat plasma membrane 71.65 73.77
TraesCS6D01G037900.1 Wheat plasma membrane 71.84 73.67
TraesCS6A01G032500.1 Wheat plastid 71.65 73.62
TraesCS6B01G046700.1 Wheat plasma membrane 71.65 73.62
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 71.65 73.62
TraesCS6B01G045700.1 Wheat plastid 71.26 73.52
HORVU6Hr1G005770.1 Barley plasma membrane 71.65 73.48
TraesCS6B01G046600.1 Wheat plasma membrane 71.65 73.48
TraesCS6A01G033100.1 Wheat plasma membrane 71.26 73.23
HORVU6Hr1G005720.1 Barley extracellular 53.07 73.09
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 71.26 73.08
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 71.26 73.08
TraesCS6D01G038000.1 Wheat plasma membrane 70.5 72.58
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 70.5 72.3
HORVU6Hr1G005580.1 Barley plastid 75.48 72.29
TraesCS6B01G044500.1 Wheat plastid 66.67 71.75
TraesCS6B01G044400.1 Wheat plastid 76.82 70.97
TraesCS2D01G073500.1 Wheat plasma membrane 66.09 69.14
TraesCS2A01G074800.1 Wheat plasma membrane 66.28 68.92
KRH22855 Soybean peroxisome 68.97 67.92
KRH26509 Soybean peroxisome 68.39 67.36
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 64.75 67.33
KRH30604 Soybean peroxisome 68.2 67.17
GSMUA_Achr11P... Banana cytosol 61.69 66.81
VIT_06s0061g00320.t01 Wine grape peroxisome 67.62 66.6
PGSC0003DMT400050658 Potato plasma membrane 54.98 66.13
VIT_08s0040g01500.t01 Wine grape golgi, peroxisome, plasma membrane, plastid 66.67 65.54
Solyc06g010250.2.1 Tomato plasma membrane 62.45 65.46
CDY06298 Canola golgi, peroxisome, plasma membrane 52.3 64.85
AT5G60770.1 Thale cress plasma membrane 65.13 64.52
VIT_06s0061g00310.t01 Wine grape plasma membrane 30.65 64.26
CDY22703 Canola golgi, peroxisome, plasma membrane 61.69 64.14
Bra002453.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 64.56 63.95
PGSC0003DMT400002924 Potato plasma membrane 64.56 63.58
PGSC0003DMT400050654 Potato plasma membrane 63.79 63.43
Solyc11g069750.1.1 Tomato extracellular 63.79 63.43
AT1G08090.1 Thale cress cytosol, peroxisome, plasma membrane 64.37 63.4
Solyc11g069760.1.1 Tomato extracellular, plasma membrane 22.22 63.39
CDY32821 Canola cytosol, peroxisome, plasma membrane 56.32 63.36
Bra031611.1-P Field mustard golgi, peroxisome, plasma membrane 61.3 63.24
CDY06299 Canola golgi, peroxisome, plasma membrane 61.3 63.24
Bra030713.1-P Field mustard golgi, peroxisome, plasma membrane 64.18 63.21
CDX93591 Canola golgi, peroxisome, plasma membrane 56.13 63.15
PGSC0003DMT400092589 Potato plasma membrane 64.56 63.11
CDY68730 Canola endoplasmic reticulum, plasma membrane 47.51 63.1
CDY22704 Canola cytosol, peroxisome, plasma membrane 55.94 63.07
Bra031610.1-P Field mustard golgi, peroxisome, plasma membrane 63.79 62.95
Bra018656.1-P Field mustard golgi, peroxisome, plasma membrane 58.62 62.83
CDX93592 Canola golgi, peroxisome, plasma membrane 55.36 62.83
Bra018655.1-P Field mustard golgi, peroxisome, plasma membrane 60.15 62.67
PGSC0003DMT400040689 Potato plasma membrane 62.84 62.6
PGSC0003DMT400031304 Potato plasma membrane 63.41 62.45
Bra034142.1-P Field mustard plasma membrane 18.39 62.34
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 52.87 61.88
CDY70994 Canola golgi, plasma membrane 41.76 61.76
CDY72274 Canola plasma membrane 41.76 61.76
CDY50324 Canola plasma membrane 56.7 61.67
CDY69111 Canola peroxisome 56.7 61.67
AT3G45060.1 Thale cress peroxisome 63.98 61.62
Bra002451.1-P Field mustard golgi, peroxisome, plasma membrane 63.22 61.57
Bra038302.1-P Field mustard peroxisome 63.41 61.52
PGSC0003DMT400031306 Potato plasma membrane 41.57 61.47
Bra037625.1-P Field mustard peroxisome 63.6 61.37
AT5G60780.1 Thale cress peroxisome 63.03 61.04
AT1G08100.1 Thale cress cytosol, peroxisome, plasma membrane 60.92 60.92
Bra020230.1-P Field mustard peroxisome 56.32 60.25
Bra037626.1-P Field mustard peroxisome 61.3 58.61
Bra038301.1-P Field mustard golgi, peroxisome, plasma membrane 60.92 58.56
Solyc06g074990.1.1 Tomato plasma membrane 58.24 57.79
CDY26984 Canola plasma membrane 49.62 56.8
CDY31024 Canola endoplasmic reticulum, plasma membrane 16.09 54.55
Zm00001d011679_P001 Maize plasma membrane 52.3 52.5
CDY53125 Canola plastid 18.39 52.17
CDY31023 Canola endoplasmic reticulum, extracellular 8.05 50.0
CDX99169 Canola cytosol 6.51 45.33
Zm00001d044504_P001 Maize plasma membrane 37.93 40.82
AT4G14358.1 Thale cress cytosol 6.7 40.23
Zm00001d025783_P001 Maize extracellular, mitochondrion, plasma membrane, plastid, vacuole 14.75 39.9
Solyc11g069740.1.1 Tomato cytosol, peroxisome 36.97 37.33
Zm00001d016468_P001 Maize plasma membrane 13.98 34.11
Protein Annotations
Gene3D:1.20.1250.20EntrezGene:103626520MapMan:24.2.2.10MapMan:25.1.3.1UniProt:A0A1D6GYF5ProteinID:AQK67804.1
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0055085
InterPro:IPR020846InterPro:MFSInterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF07690PANTHER:PTHR23515
PANTHER:PTHR23515:SF3SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0001534EC9EnsemblPlantsGene:Zm00001d014976EnsemblPlants:Zm00001d014976_P001
EnsemblPlants:Zm00001d014976_T001SEG:seg::::
Description
nitrate transport3
Coordinates
chr5:+:70820654..70822222
Molecular Weight (calculated)
56102.9 Da
IEP (calculated)
8.079
GRAVY (calculated)
0.372
Length
522 amino acids
Sequence
(BLAST)
001: MASDAAHGSS LDGVTPSSKF DLPVDSEHKA KTIRLLSFAN PHMRTFHLSW MSFFTCVVST FAAAPLIPII RENLGLTKAD IGNAGVASVS GAIFSRLAMG
101: AVCDLLGPRY GCAFVVMLAA PAVFCMAVID SAAGYVACRF LIGFSLATFV SCQYWTSTMF NIKIIGTVNA LASGWGDMGG GATQLIMPFV YEAILRCGAT
201: PFAAWRIAYF VPGIMHIAVG ILVLTAGQDL PDGNLRSLRK QQQQQQQGDG GDASCCRRDS FSRVLWHAVA NYRTWVFVFV YGYSMGVQLT TNNIIAEFYY
301: DQFELDIRVA GIIAACFGMA NLVSRPLGGV LSDLGARYWG MRARLWNIWI LQTAGGAFCF WLGRASELPA SVTAMVLFSF CAQAACGATF GVIPFVSRRS
401: LGVISGLTGA GGNVGAGLTQ LLFFTTSSYS TRKGIENMGI MAMACTLPLV LVHFPQWGSM LLPPSADADE ERYYASEWSE DEKSVGRHSA SLKFAENSRS
501: ERGKRNAVAV LATAAATPEH VV
Best Arabidopsis Sequence Match ( AT5G60770.1 )
(BLAST)
001: MADGFGEPGS SMHGVTGREQ SYAFSVESPA VPSDSSAKFS LPVDTEHKAK VFKLLSFEAP HMRTFHLAWI SFFTCFISTF AAAPLVPIIR DNLNLTRQDV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV
Arabidopsis Description
NRT2.4High affinity nitrate transporter 2.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.