Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69111 | Canola | peroxisome | 82.37 | 92.5 |
| Bra002451.1-P | Field mustard | golgi, peroxisome, plasma membrane | 91.65 | 92.16 |
| CDY50324 | Canola | plasma membrane | 82.0 | 92.08 |
| Bra020230.1-P | Field mustard | peroxisome | 82.93 | 91.6 |
| AT3G45060.1 | Thale cress | peroxisome | 89.8 | 89.3 |
| KRH22855 | Soybean | peroxisome | 73.84 | 75.09 |
| VIT_06s0061g00320.t01 | Wine grape | peroxisome | 73.65 | 74.91 |
| KRH26509 | Soybean | peroxisome | 73.65 | 74.91 |
| KRH30604 | Soybean | peroxisome | 73.47 | 74.72 |
| VIT_06s0061g00310.t01 | Wine grape | plasma membrane | 34.51 | 74.7 |
| Solyc06g010250.2.1 | Tomato | plasma membrane | 66.79 | 72.29 |
| HORVU6Hr1G005750.1 | Barley | cytosol, plastid | 13.54 | 72.28 |
| AT5G60770.1 | Thale cress | plasma membrane | 70.13 | 71.73 |
| PGSC0003DMT400050654 | Potato | plasma membrane | 69.2 | 71.05 |
| PGSC0003DMT400040689 | Potato | plasma membrane | 69.02 | 70.99 |
| Solyc11g069750.1.1 | Tomato | extracellular | 68.46 | 70.29 |
| AT1G08090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 68.46 | 69.62 |
| GSMUA_Achr8P14230_001 | Banana | golgi, peroxisome, plasma membrane | 64.56 | 69.32 |
| GSMUA_Achr11P... | Banana | cytosol | 61.6 | 68.88 |
| TraesCS6D01G035900.1 | Wheat | plasma membrane | 64.75 | 68.84 |
| TraesCS6D01G035700.1 | Wheat | plasma membrane | 64.75 | 68.84 |
| TraesCS6A01G031100.1 | Wheat | plastid | 64.56 | 68.64 |
| TraesCS6B01G044300.1 | Wheat | plasma membrane | 64.56 | 68.64 |
| TraesCS6B01G044200.1 | Wheat | plasma membrane | 64.56 | 68.64 |
| TraesCS6A01G031000.1 | Wheat | plasma membrane | 64.38 | 68.44 |
| TraesCS6A01G030900.1 | Wheat | plasma membrane | 64.38 | 68.44 |
| TraesCS6A01G030700.1 | Wheat | plastid | 64.38 | 68.44 |
| TraesCS6D01G035800.1 | Wheat | plasma membrane | 64.38 | 68.44 |
| HORVU6Hr1G005590.1 | Barley | plasma membrane | 64.19 | 68.24 |
| TraesCS6B01G044100.1 | Wheat | plastid | 64.19 | 68.24 |
| TraesCS6A01G030800.1 | Wheat | plasma membrane | 64.19 | 68.24 |
| KRH25078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 55.66 | 67.26 |
| HORVU6Hr1G005780.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 57.51 | 67.25 |
| Zm00001d054057_P001 | Maize | extracellular | 65.12 | 66.98 |
| Zm00001d054060_P001 | Maize | plastid | 65.12 | 66.98 |
| EES04351 | Sorghum | golgi, peroxisome, plasma membrane | 65.49 | 66.98 |
| EES06135 | Sorghum | golgi, peroxisome, plasma membrane | 65.49 | 66.98 |
| Os02t0112600-01 | Rice | golgi, plasma membrane, plastid | 66.23 | 66.98 |
| Os02t0112100-01 | Rice | golgi, plasma membrane, plastid | 66.23 | 66.98 |
| TraesCS6B01G044000.1 | Wheat | plasma membrane | 63.08 | 66.8 |
| TraesCS6D01G035600.1 | Wheat | plasma membrane | 63.08 | 66.8 |
| HORVU6Hr1G005570.1 | Barley | golgi, plasma membrane | 33.58 | 66.54 |
| TraesCS6D01G037200.1 | Wheat | golgi, plasma membrane, plastid | 62.71 | 66.54 |
| TraesCS6A01G032400.1 | Wheat | plastid | 62.52 | 66.34 |
| TraesCS6A01G031200.1 | Wheat | plasma membrane | 62.52 | 66.21 |
| TraesCS6A01G032500.1 | Wheat | plastid | 62.34 | 66.14 |
| TraesCS6D01G037300.1 | Wheat | golgi, plasma membrane, plastid | 62.34 | 66.14 |
| TraesCS6B01G045600.1 | Wheat | golgi, plasma membrane, vacuole | 62.34 | 66.14 |
| TraesCS6D01G037800.1 | Wheat | plasma membrane | 62.15 | 66.08 |
| TraesCS6D01G037900.1 | Wheat | plasma membrane | 62.34 | 66.01 |
| TraesCS6B01G045700.1 | Wheat | plastid | 61.6 | 65.61 |
| TraesCS6A01G033000.1 | Wheat | plasma membrane | 61.78 | 65.42 |
| TraesCS6B01G046600.1 | Wheat | plasma membrane | 61.78 | 65.42 |
| TraesCS6A01G032800.1 | Wheat | plasma membrane | 61.41 | 65.29 |
| TraesCS6B01G046500.1 | Wheat | plasma membrane | 61.41 | 65.29 |
| TraesCS6A01G032900.1 | Wheat | golgi, plasma membrane, vacuole | 61.6 | 65.23 |
| HORVU6Hr1G005770.1 | Barley | plasma membrane | 61.6 | 65.23 |
| TraesCS6D01G038100.1 | Wheat | golgi, plasma membrane, vacuole | 61.6 | 65.23 |
| TraesCS6A01G033200.1 | Wheat | plasma membrane | 61.41 | 65.16 |
| AT1G08100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 63.08 | 65.13 |
| HORVU6Hr1G005720.1 | Barley | extracellular | 45.64 | 64.91 |
| TraesCS6B01G046700.1 | Wheat | plasma membrane | 61.04 | 64.76 |
| TraesCS6A01G033100.1 | Wheat | plasma membrane | 60.85 | 64.57 |
| HORVU6Hr1G005930.1 | Barley | plasma membrane | 60.85 | 64.57 |
| TraesCS6D01G038300.1 | Wheat | plasma membrane | 60.85 | 64.57 |
| TraesCS6D01G038200.1 | Wheat | plasma membrane | 60.85 | 64.57 |
| TraesCS6D01G038000.1 | Wheat | plasma membrane | 60.67 | 64.5 |
| HORVU6Hr1G005600.2 | Barley | endoplasmic reticulum | 60.85 | 64.44 |
| HORVU6Hr1G005580.1 | Barley | plastid | 64.56 | 63.85 |
| EES04350 | Sorghum | plastid | 62.89 | 63.36 |
| Zm00001d014976_P001 | Maize | plasma membrane | 61.04 | 63.03 |
| TraesCS2A01G074800.1 | Wheat | plasma membrane | 57.88 | 62.15 |
| TraesCS6B01G044500.1 | Wheat | plastid | 55.84 | 62.06 |
| TraesCS2D01G073500.1 | Wheat | plasma membrane | 57.33 | 61.92 |
| TraesCS6B01G044400.1 | Wheat | plastid | 64.75 | 61.77 |
| AT1G12940.1 | Thale cress | plasma membrane | 51.02 | 54.78 |
| AT5G14570.1 | Thale cress | plastid | 40.63 | 44.42 |
| AT4G14358.1 | Thale cress | cytosol | 6.86 | 42.53 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | EntrezGene:836199 | UniProt:A0A178UID3 | ProteinID:AED97376.1 |
| ArrayExpress:AT5G60780 | EnsemblPlantsGene:AT5G60780 | RefSeq:AT5G60780 | TAIR:AT5G60780 | RefSeq:AT5G60780-TAIR-G | EnsemblPlants:AT5G60780.1 |
| TAIR:AT5G60780.1 | Symbol:ATNRT2.3 | ProteinID:BAB10099.1 | EMBL:DQ447097 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009705 | GO:GO:0009987 | GO:GO:0015112 |
| GO:GO:0015706 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042128 | GO:GO:0055085 | GO:GO:0071249 |
| InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom | InterPro:MFS_trans_sf | RefSeq:NP_200886.1 | ProteinID:OAO93420.1 |
| PFAM:PF07690 | PO:PO:0000037 | PO:PO:0009025 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | UniProt:Q9FJH7 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0000048CBC | SEG:seg | : | : |
Description
NRT2.3High affinity nitrate transporter 2.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH7]
Coordinates
chr5:+:24450745..24452964
Molecular Weight (calculated)
58233.7 Da
IEP (calculated)
8.869
GRAVY (calculated)
0.351
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHNHSNEEG SIGTSLHGVT AREQVFSFSV DASSQTVQSD DPTAKFALPV DSEHRAKVFN PLSFAKPHMR AFHLGWLSFF TCFISTFAAA PLVPIIRDNL
101: DLTKTDIGNA GVASVSGAIF SRLAMGAVCD LLGARYGTAF SLMLTAPTVF SMSFVGGPSG YLGVRFMIGF CLATFVSCQY WTSVMFNGKI IGLVNGCAGG
201: WGDMGGGVTQ LLMPMVFHVI KLAGATPFMA WRIAFFVPGF LQVVMGILVL SLGQDLPDGN LSTLQKSGQV SKDKFSKVFW FAVKNYRTWI LFVLYGSSMG
301: IELTINNVIS GYFYDRFNLK LQTAGIVAAS FGMANFIARP FGGYASDVAA RVFGMRGRLW TLWIFQTVGA LFCIWLGRAS SLPIAILAMM LFSIGTQAAC
401: GALFGVAPFV SRRSLGLISG LTGAGGNFGS GLTQLLFFSS ARFSTAEGLS LMGVMAVLCT LPVAFIHFPQ WGSMFLRPST DGERSQEEYY YGSEWTENEK
501: QQGLHEGSIK FAENSRSERG RKVALANIPT PENGTPSHV
101: DLTKTDIGNA GVASVSGAIF SRLAMGAVCD LLGARYGTAF SLMLTAPTVF SMSFVGGPSG YLGVRFMIGF CLATFVSCQY WTSVMFNGKI IGLVNGCAGG
201: WGDMGGGVTQ LLMPMVFHVI KLAGATPFMA WRIAFFVPGF LQVVMGILVL SLGQDLPDGN LSTLQKSGQV SKDKFSKVFW FAVKNYRTWI LFVLYGSSMG
301: IELTINNVIS GYFYDRFNLK LQTAGIVAAS FGMANFIARP FGGYASDVAA RVFGMRGRLW TLWIFQTVGA LFCIWLGRAS SLPIAILAMM LFSIGTQAAC
401: GALFGVAPFV SRRSLGLISG LTGAGGNFGS GLTQLLFFSS ARFSTAEGLS LMGVMAVLCT LPVAFIHFPQ WGSMFLRPST DGERSQEEYY YGSEWTENEK
501: QQGLHEGSIK FAENSRSERG RKVALANIPT PENGTPSHV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.