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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
EES07094
KXG26563

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G08090.1 EES07094 AT5G50200.1 17012411
AT1G08090.1 KXG26563 AT5G50200.1 17012411
AT5G60780.1 EES07094 AT5G50200.1 17012411
AT5G60780.1 KXG26563 AT5G50200.1 17012411
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES04351 Sorghum golgi, peroxisome, plasma membrane 99.24 99.24
Zm00001d054057_P001 Maize extracellular 93.74 94.27
Zm00001d054060_P001 Maize plastid 93.74 94.27
Os02t0112100-01 Rice golgi, plasma membrane, plastid 87.29 86.3
Os02t0112600-01 Rice golgi, plasma membrane, plastid 87.29 86.3
TraesCS6A01G030900.1 Wheat plasma membrane 81.4 84.62
TraesCS6A01G031000.1 Wheat plasma membrane 81.21 84.42
TraesCS6D01G035900.1 Wheat plasma membrane 81.21 84.42
TraesCS6A01G030700.1 Wheat plastid 81.02 84.22
TraesCS6A01G030800.1 Wheat plasma membrane 81.02 84.22
TraesCS6B01G044200.1 Wheat plasma membrane 81.02 84.22
TraesCS6B01G044300.1 Wheat plasma membrane 81.02 84.22
HORVU6Hr1G005590.1 Barley plasma membrane 80.83 84.02
TraesCS6B01G044100.1 Wheat plastid 80.83 84.02
TraesCS6D01G035700.1 Wheat plasma membrane 80.83 84.02
TraesCS6D01G035800.1 Wheat plasma membrane 80.83 84.02
TraesCS6A01G031100.1 Wheat plastid 80.65 83.83
TraesCS6D01G035600.1 Wheat plasma membrane 80.83 83.69
TraesCS6A01G031200.1 Wheat plasma membrane 80.27 83.1
TraesCS6B01G044000.1 Wheat plasma membrane 79.32 82.12
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 41.94 81.25
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 76.85 79.57
HORVU6Hr1G005580.1 Barley plastid 81.02 78.35
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 68.12 77.87
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 74.0 77.69
HORVU6Hr1G005750.1 Barley cytosol, plastid 14.8 77.23
TraesCS6A01G032400.1 Wheat plastid 74.38 77.17
TraesCS6B01G046500.1 Wheat plasma membrane 74.0 76.92
TraesCS6B01G044500.1 Wheat plastid 70.78 76.91
TraesCS6A01G032500.1 Wheat plastid 74.0 76.77
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 74.0 76.77
TraesCS6D01G037800.1 Wheat plasma membrane 73.81 76.73
TraesCS6B01G045700.1 Wheat plastid 73.62 76.68
GSMUA_Achr11P... Banana cytosol 70.02 76.56
EES04350 Sorghum plastid 77.61 76.45
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 73.62 76.38
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 73.62 76.38
TraesCS6A01G032800.1 Wheat plasma membrane 73.43 76.33
TraesCS6B01G044400.1 Wheat plastid 81.78 76.28
KRH26509 Soybean peroxisome 76.66 76.23
TraesCS6D01G038200.1 Wheat plasma membrane 73.43 76.18
HORVU6Hr1G005720.1 Barley extracellular 54.65 75.99
KRH22855 Soybean peroxisome 76.28 75.85
TraesCS6D01G038300.1 Wheat plasma membrane 73.06 75.79
TraesCS6A01G033100.1 Wheat plasma membrane 72.87 75.59
TraesCS6A01G033000.1 Wheat plasma membrane 72.87 75.44
TraesCS6B01G046600.1 Wheat plasma membrane 72.87 75.44
TraesCS6B01G046700.1 Wheat plasma membrane 72.68 75.39
KRH30604 Soybean peroxisome 75.71 75.28
TraesCS6D01G037900.1 Wheat plasma membrane 72.68 75.25
HORVU6Hr1G005930.1 Barley plasma membrane 72.49 75.2
TraesCS6A01G033200.1 Wheat plasma membrane 72.49 75.2
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 72.3 74.85
TraesCS2A01G074800.1 Wheat plasma membrane 70.97 74.5
HORVU6Hr1G005770.1 Barley plasma membrane 71.92 74.46
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 71.92 74.46
CDY06298 Canola golgi, peroxisome, plasma membrane 59.39 74.35
TraesCS2D01G073500.1 Wheat plasma membrane 70.21 74.15
TraesCS6D01G038000.1 Wheat plasma membrane 70.59 73.37
VIT_08s0040g01500.t01 Wine grape golgi, peroxisome, plasma membrane, plastid 73.62 73.07
PGSC0003DMT400050658 Potato plasma membrane 60.15 73.04
VIT_06s0061g00320.t01 Wine grape peroxisome 73.43 73.02
CDY32821 Canola cytosol, peroxisome, plasma membrane 63.38 71.98
PGSC0003DMT400092589 Potato plasma membrane 72.87 71.91
PGSC0003DMT400002924 Potato plasma membrane 72.3 71.89
AT5G60770.1 Thale cress plasma membrane 71.35 71.35
CDX93591 Canola golgi, peroxisome, plasma membrane 62.81 71.34
Bra030713.1-P Field mustard golgi, peroxisome, plasma membrane 71.73 71.32
PGSC0003DMT400031304 Potato plasma membrane 71.73 71.32
CDY22704 Canola cytosol, peroxisome, plasma membrane 62.43 71.06
CDX93592 Canola golgi, peroxisome, plasma membrane 61.86 70.87
Bra018656.1-P Field mustard golgi, peroxisome, plasma membrane 65.46 70.84
Bra002453.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 70.78 70.78
AT1G08090.1 Thale cress cytosol, peroxisome, plasma membrane 71.16 70.75
Bra031610.1-P Field mustard golgi, peroxisome, plasma membrane 70.97 70.7
PGSC0003DMT400031306 Potato plasma membrane 47.06 70.25
Bra018655.1-P Field mustard golgi, peroxisome, plasma membrane 66.6 70.06
Bra031611.1-P Field mustard golgi, peroxisome, plasma membrane 66.41 69.17
CDY06299 Canola golgi, peroxisome, plasma membrane 66.41 69.17
CDY22703 Canola golgi, peroxisome, plasma membrane 65.84 69.12
CDY68730 Canola endoplasmic reticulum, plasma membrane 51.42 68.96
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 58.25 68.83
CDY72274 Canola plasma membrane 45.73 68.27
Bra034142.1-P Field mustard plasma membrane 19.92 68.18
PGSC0003DMT400050654 Potato plasma membrane 67.74 68.0
CDY70994 Canola golgi, plasma membrane 45.54 67.99
Solyc11g069750.1.1 Tomato extracellular 67.55 67.81
Solyc06g010250.2.1 Tomato plasma membrane 63.76 67.47
VIT_06s0061g00310.t01 Wine grape plasma membrane 31.88 67.47
AT1G08100.1 Thale cress cytosol, peroxisome, plasma membrane 66.79 67.43
Solyc11g069760.1.1 Tomato extracellular, plasma membrane 22.96 66.12
Solyc06g074990.1.1 Tomato plasma membrane 65.84 65.97
Bra038302.1-P Field mustard peroxisome 67.17 65.8
PGSC0003DMT400040689 Potato plasma membrane 65.28 65.65
Bra037625.1-P Field mustard peroxisome 67.36 65.62
AT5G60780.1 Thale cress peroxisome 66.98 65.49
AT3G45060.1 Thale cress peroxisome 67.17 65.31
Bra037626.1-P Field mustard peroxisome 67.36 65.02
Bra002451.1-P Field mustard golgi, peroxisome, plasma membrane 65.84 64.74
CDY69111 Canola peroxisome 58.82 64.58
CDY50324 Canola plasma membrane 58.63 64.38
Bra020230.1-P Field mustard peroxisome 59.58 64.34
Bra038301.1-P Field mustard golgi, peroxisome, plasma membrane 65.84 63.9
CDY31024 Canola endoplasmic reticulum, plasma membrane 18.6 63.64
CDY26984 Canola plasma membrane 53.51 61.84
CDY53125 Canola plastid 19.54 55.98
EES01339 Sorghum plasma membrane 51.8 53.01
CDY31023 Canola endoplasmic reticulum, extracellular 7.59 47.62
AT4G14358.1 Thale cress cytosol 7.21 43.68
CDX99169 Canola cytosol 6.07 42.67
Solyc11g069740.1.1 Tomato cytosol, peroxisome 40.42 41.2
OQU87011 Sorghum plasma membrane 35.29 38.43
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.10MapMan:25.1.3.1EntrezGene:8085192UniProt:C5XS81EnsemblPlants:EES06135
ProteinID:EES06135ProteinID:EES06135.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005886GO:GO:0006810GO:GO:0008150
GO:GO:0009705GO:GO:0009987GO:GO:0015112GO:GO:0015706GO:GO:0016020GO:GO:0016021
GO:GO:0055085GO:GO:0071249InterPro:IPR020846InterPro:MFSInterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF07690PANTHER:PTHR23515PANTHER:PTHR23515:SF3EnsemblPlantsGene:SORBI_3004G009500SUPFAM:SSF103473unigene:Sbi.21413
TMHMM:TMhelixUniParc:UPI0001A85E1CRefSeq:XP_002453159.1SEG:seg::
Description
hypothetical protein
Coordinates
chr4:-:814200..816152
Molecular Weight (calculated)
57044.3 Da
IEP (calculated)
7.873
GRAVY (calculated)
0.363
Length
527 amino acids
Sequence
(BLAST)
001: MEAAGAPGSS LHGMTGREPA FAFSTAAPEH DGDDAAASKF DLPVDSEHKA KSIRLFSFAN PHMRTFHLSW ISFFTCFVST FAAAPLVPII RDNLNLTKAD
101: IGNAGVASVS GSIFSRLTMG AVCDLLGPRY GCAFLIMLSA PTVFCMALID DAAGYIVVRF LIGFSLATFV SCQYWMSTMF NSKIIGTVNG LAAGWGNMGG
201: GATQLIMPLV YDVIRKCGAT PFTAWRVAYF VPGLMHVVMG VLVLTLGQDL PDGNLRTLQK KGNVNKDKFS KVMWYALINY RTWIFVLLYG YSMGVELTTD
301: NVIAEYMYDR FDLDLRVAGT IAACFGMANL VARPMGGVLS DVGARYWGMR ARLWNIWILQ TAGGAFCLWL GRASTLPVSI VAMVLFSFCA QAACGAIFGV
401: IPFVSRRSLG IISGMTGAGG NFGAGLTQLL FFTSSTYSTA RGLEYMGIMI MACTLPVVFV HFPQWGSMFF PASATADEET YYASEWNDDE KSKGLHSASL
501: KFAENSRSER GKRNVIQADA GATPEHV
Best Arabidopsis Sequence Match ( AT5G60770.1 )
(BLAST)
001: MADGFGEPGS SMHGVTGREQ SYAFSVESPA VPSDSSAKFS LPVDTEHKAK VFKLLSFEAP HMRTFHLAWI SFFTCFISTF AAAPLVPIIR DNLNLTRQDV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV
Arabidopsis Description
NRT2.4High affinity nitrate transporter 2.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.