Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002453.1-P | Field mustard | golgi, peroxisome, plasma membrane, plastid | 94.88 | 94.88 |
| CDY68730 | Canola | endoplasmic reticulum, plasma membrane | 68.88 | 92.37 |
| AT1G08090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 83.3 | 82.83 |
| CDY26984 | Canola | plasma membrane | 70.97 | 82.02 |
| VIT_06s0061g00320.t01 | Wine grape | peroxisome | 81.78 | 81.32 |
| KRH30604 | Soybean | peroxisome | 81.59 | 81.13 |
| KRH22855 | Soybean | peroxisome | 81.21 | 80.75 |
| KRH26509 | Soybean | peroxisome | 80.83 | 80.38 |
| AT1G08100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 78.56 | 79.31 |
| VIT_06s0061g00310.t01 | Wine grape | plasma membrane | 36.62 | 77.51 |
| GSMUA_Achr8P14230_001 | Banana | golgi, peroxisome, plasma membrane | 72.49 | 76.1 |
| GSMUA_Achr11P... | Banana | cytosol | 69.45 | 75.93 |
| KRH25078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 61.67 | 72.87 |
| Zm00001d054057_P001 | Maize | extracellular | 71.35 | 71.76 |
| Zm00001d054060_P001 | Maize | plastid | 71.16 | 71.56 |
| Os02t0112600-01 | Rice | golgi, plasma membrane, plastid | 72.3 | 71.48 |
| Os02t0112100-01 | Rice | golgi, plasma membrane, plastid | 72.3 | 71.48 |
| TraesCS6A01G030900.1 | Wheat | plasma membrane | 68.69 | 71.4 |
| EES06135 | Sorghum | golgi, peroxisome, plasma membrane | 71.35 | 71.35 |
| EES04351 | Sorghum | golgi, peroxisome, plasma membrane | 71.35 | 71.35 |
| TraesCS6B01G044200.1 | Wheat | plasma membrane | 68.5 | 71.2 |
| TraesCS6A01G031000.1 | Wheat | plasma membrane | 68.5 | 71.2 |
| TraesCS6A01G031200.1 | Wheat | plasma membrane | 68.69 | 71.12 |
| TraesCS6A01G030700.1 | Wheat | plastid | 68.31 | 71.01 |
| TraesCS6B01G044300.1 | Wheat | plasma membrane | 68.31 | 71.01 |
| TraesCS6D01G035700.1 | Wheat | plasma membrane | 68.31 | 71.01 |
| TraesCS6D01G035900.1 | Wheat | plasma membrane | 68.31 | 71.01 |
| HORVU6Hr1G005590.1 | Barley | plasma membrane | 68.31 | 71.01 |
| TraesCS6B01G044000.1 | Wheat | plasma membrane | 68.5 | 70.92 |
| TraesCS6A01G030800.1 | Wheat | plasma membrane | 68.12 | 70.81 |
| TraesCS6A01G031100.1 | Wheat | plastid | 68.12 | 70.81 |
| TraesCS6D01G035600.1 | Wheat | plasma membrane | 68.31 | 70.73 |
| TraesCS6B01G044100.1 | Wheat | plastid | 67.93 | 70.61 |
| TraesCS6D01G035800.1 | Wheat | plasma membrane | 67.93 | 70.61 |
| HORVU6Hr1G005750.1 | Barley | cytosol, plastid | 13.47 | 70.3 |
| AT5G60780.1 | Thale cress | peroxisome | 71.73 | 70.13 |
| AT3G45060.1 | Thale cress | peroxisome | 71.54 | 69.56 |
| HORVU6Hr1G005570.1 | Barley | golgi, plasma membrane | 35.29 | 68.38 |
| HORVU6Hr1G005600.2 | Barley | endoplasmic reticulum | 65.46 | 67.78 |
| HORVU6Hr1G005780.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 58.44 | 66.81 |
| TraesCS6B01G046600.1 | Wheat | plasma membrane | 64.14 | 66.4 |
| TraesCS6D01G037800.1 | Wheat | plasma membrane | 63.76 | 66.27 |
| TraesCS6A01G033000.1 | Wheat | plasma membrane | 63.95 | 66.21 |
| TraesCS6D01G038100.1 | Wheat | golgi, plasma membrane, vacuole | 63.95 | 66.21 |
| TraesCS6D01G037900.1 | Wheat | plasma membrane | 63.95 | 66.21 |
| TraesCS6A01G032500.1 | Wheat | plastid | 63.76 | 66.14 |
| TraesCS6D01G037300.1 | Wheat | golgi, plasma membrane, plastid | 63.76 | 66.14 |
| TraesCS2A01G074800.1 | Wheat | plasma membrane | 63.0 | 66.14 |
| TraesCS6B01G046500.1 | Wheat | plasma membrane | 63.57 | 66.08 |
| HORVU6Hr1G005580.1 | Barley | plastid | 68.31 | 66.06 |
| TraesCS6A01G032900.1 | Wheat | golgi, plasma membrane, vacuole | 63.76 | 66.01 |
| TraesCS6B01G046700.1 | Wheat | plasma membrane | 63.57 | 65.94 |
| TraesCS6A01G032400.1 | Wheat | plastid | 63.57 | 65.94 |
| TraesCS6D01G037200.1 | Wheat | golgi, plasma membrane, plastid | 63.57 | 65.94 |
| TraesCS6D01G038200.1 | Wheat | plasma membrane | 63.57 | 65.94 |
| HORVU6Hr1G005770.1 | Barley | plasma membrane | 63.57 | 65.82 |
| TraesCS6B01G045700.1 | Wheat | plastid | 63.19 | 65.81 |
| TraesCS6A01G033100.1 | Wheat | plasma membrane | 63.38 | 65.75 |
| TraesCS6B01G045600.1 | Wheat | golgi, plasma membrane, vacuole | 63.19 | 65.55 |
| HORVU6Hr1G005930.1 | Barley | plasma membrane | 63.19 | 65.55 |
| TraesCS6A01G032800.1 | Wheat | plasma membrane | 63.0 | 65.48 |
| EES04350 | Sorghum | plastid | 66.41 | 65.42 |
| TraesCS6D01G038300.1 | Wheat | plasma membrane | 63.0 | 65.35 |
| Zm00001d014976_P001 | Maize | plasma membrane | 64.52 | 65.13 |
| TraesCS2D01G073500.1 | Wheat | plasma membrane | 61.67 | 65.13 |
| TraesCS6D01G038000.1 | Wheat | plasma membrane | 62.62 | 65.09 |
| TraesCS6A01G033200.1 | Wheat | plasma membrane | 62.62 | 64.96 |
| TraesCS6B01G044500.1 | Wheat | plastid | 59.01 | 64.12 |
| HORVU6Hr1G005720.1 | Barley | extracellular | 46.11 | 64.12 |
| TraesCS6B01G044400.1 | Wheat | plastid | 68.69 | 64.07 |
| AT1G12940.1 | Thale cress | plasma membrane | 53.32 | 55.98 |
| AT5G14570.1 | Thale cress | plastid | 41.18 | 44.02 |
| AT4G14358.1 | Thale cress | cytosol | 6.45 | 39.08 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | EntrezGene:836198 | UniProt:A0A178UB04 | ProteinID:AED97375.1 |
| ArrayExpress:AT5G60770 | EnsemblPlantsGene:AT5G60770 | RefSeq:AT5G60770 | TAIR:AT5G60770 | RefSeq:AT5G60770-TAIR-G | EnsemblPlants:AT5G60770.1 |
| TAIR:AT5G60770.1 | Symbol:ATNRT2.4 | Unigene:At.55647 | ProteinID:BAB10098.1 | EMBL:DQ056732 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009705 | GO:GO:0009987 |
| GO:GO:0015112 | GO:GO:0015706 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0042128 | GO:GO:0055085 |
| GO:GO:0071249 | InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom | InterPro:MFS_trans_sf | RefSeq:NP_200885.1 |
| ProteinID:OAO90825.1 | PFAM:PF07690 | PFscan:PS50850 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | UniProt:Q9FJH8 |
| SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0000048CBB | SEG:seg | : | : |
Description
NRT2.4High affinity nitrate transporter 2.4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH8]
Coordinates
chr5:+:24444365..24447127
Molecular Weight (calculated)
57771.4 Da
IEP (calculated)
9.006
GRAVY (calculated)
0.323
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MADGFGEPGS SMHGVTGREQ SYAFSVESPA VPSDSSAKFS LPVDTEHKAK VFKLLSFEAP HMRTFHLAWI SFFTCFISTF AAAPLVPIIR DNLNLTRQDV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVGG AGGYITVRFM IGFCLATFVS CQYWMSTMFN GQIIGLVNGT AAGWGNMGGG
201: VTQLLMPMVY EIIRRLGSTS FTAWRMAFFV PGWMHIIMGI LVLTLGQDLP DGNRSTLEKK GAVTKDKFSK VLWYAITNYR TWVFVLLYGY SMGVELTTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPIGGWASD IAARRFGMRG RLWTLWIIQT LGGFFCLWLG RATTLPTAVV FMILFSLGAQ AACGATFAII
401: PFISRRSLGI ISGLTGAGGN FGSGLTQLVF FSTSTFSTEQ GLTWMGVMIM ACTLPVTLVH FPQWGSMFLP STEDEVKSTE EYYYMKEWTE TEKRKGMHEG
501: SLKFAVNSRS ERGRRVASAP SPPPEHV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.