Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • mitochondrion 3
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY68730 Canola endoplasmic reticulum, plasma membrane 82.02 95.17
CDY72274 Canola plasma membrane 62.94 81.3
CDY70994 Canola golgi, plasma membrane 61.62 79.6
Bra002453.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 84.87 73.43
VIT_06s0061g00310.t01 Wine grape plasma membrane 39.91 73.09
AT5G60770.1 Thale cress plasma membrane 82.02 70.97
CDY31024 Canola endoplasmic reticulum, plasma membrane 23.68 70.13
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 40.13 67.28
HORVU6Hr1G005720.1 Barley extracellular 52.85 63.59
CDY53125 Canola plastid 25.0 61.96
CDY06299 Canola golgi, peroxisome, plasma membrane 67.76 61.07
CDY22703 Canola golgi, peroxisome, plasma membrane 67.11 60.96
KRH30604 Soybean peroxisome 70.18 60.38
KRH22855 Soybean peroxisome 70.18 60.38
KRH26509 Soybean peroxisome 69.74 60.0
VIT_06s0061g00320.t01 Wine grape peroxisome 69.08 59.43
CDY06298 Canola golgi, peroxisome, plasma membrane 53.95 58.43
CDY32821 Canola cytosol, peroxisome, plasma membrane 58.99 57.97
CDX93591 Canola golgi, peroxisome, plasma membrane 58.77 57.76
CDX93592 Canola golgi, peroxisome, plasma membrane 57.46 56.96
GSMUA_Achr11P... Banana cytosol 60.09 56.85
CDY22704 Canola cytosol, peroxisome, plasma membrane 57.24 56.37
TraesCS6B01G044500.1 Wheat plastid 59.65 56.08
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 60.09 54.58
TraesCS6B01G044200.1 Wheat plasma membrane 60.53 54.44
HORVU6Hr1G005590.1 Barley plasma membrane 60.53 54.44
TraesCS6A01G031000.1 Wheat plasma membrane 60.53 54.44
TraesCS6D01G035900.1 Wheat plasma membrane 60.31 54.24
TraesCS6B01G044300.1 Wheat plasma membrane 60.31 54.24
TraesCS6A01G030700.1 Wheat plastid 60.31 54.24
TraesCS6A01G030800.1 Wheat plasma membrane 60.31 54.24
TraesCS6A01G030900.1 Wheat plasma membrane 60.31 54.24
TraesCS6A01G031100.1 Wheat plastid 60.31 54.24
TraesCS6B01G044100.1 Wheat plastid 60.31 54.24
Os02t0112600-01 Rice golgi, plasma membrane, plastid 63.38 54.22
Os02t0112100-01 Rice golgi, plasma membrane, plastid 63.38 54.22
TraesCS6D01G035700.1 Wheat plasma membrane 60.09 54.04
TraesCS6D01G035800.1 Wheat plasma membrane 60.09 54.04
TraesCS6A01G031200.1 Wheat plasma membrane 59.87 53.63
Zm00001d054060_P001 Maize plastid 61.62 53.63
CDY31023 Canola endoplasmic reticulum, extracellular 9.87 53.57
EES04351 Sorghum golgi, peroxisome, plasma membrane 61.84 53.51
EES06135 Sorghum golgi, peroxisome, plasma membrane 61.84 53.51
TraesCS6B01G044000.1 Wheat plasma membrane 59.65 53.44
Zm00001d054057_P001 Maize extracellular 61.4 53.44
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 53.95 53.36
TraesCS6D01G035600.1 Wheat plasma membrane 59.43 53.24
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 58.55 52.46
TraesCS2A01G074800.1 Wheat plasma membrane 57.46 52.19
CDX99169 Canola cytosol 8.55 52.0
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 50.66 51.79
TraesCS2D01G073500.1 Wheat plasma membrane 56.14 51.3
CDY69111 Canola peroxisome 53.95 51.25
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 57.02 51.18
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 57.02 51.18
TraesCS6B01G046600.1 Wheat plasma membrane 57.02 51.08
CDY50324 Canola plasma membrane 53.73 51.04
TraesCS6A01G032400.1 Wheat plastid 56.8 50.98
TraesCS6A01G032500.1 Wheat plastid 56.8 50.98
TraesCS6D01G037800.1 Wheat plasma membrane 56.58 50.89
TraesCS6D01G037900.1 Wheat plasma membrane 56.8 50.88
TraesCS6B01G045700.1 Wheat plastid 56.36 50.79
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 56.58 50.79
HORVU6Hr1G005770.1 Barley plasma membrane 56.58 50.69
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 56.58 50.69
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 56.58 50.69
HORVU6Hr1G005580.1 Barley plastid 60.53 50.64
TraesCS6B01G046500.1 Wheat plasma membrane 56.14 50.49
TraesCS6A01G033000.1 Wheat plasma membrane 56.36 50.49
TraesCS6D01G038200.1 Wheat plasma membrane 56.14 50.39
TraesCS6A01G033100.1 Wheat plasma membrane 55.92 50.2
TraesCS6A01G032800.1 Wheat plasma membrane 55.7 50.1
HORVU6Hr1G005930.1 Barley plasma membrane 55.7 50.0
TraesCS6D01G038300.1 Wheat plasma membrane 55.7 50.0
TraesCS6B01G046700.1 Wheat plasma membrane 55.7 50.0
TraesCS6D01G038000.1 Wheat plasma membrane 55.48 49.9
TraesCS6A01G033200.1 Wheat plasma membrane 55.48 49.8
Zm00001d014976_P001 Maize plasma membrane 56.8 49.62
EES04350 Sorghum plastid 57.46 48.97
TraesCS6B01G044400.1 Wheat plastid 60.53 48.85
CDY21075 Canola plasma membrane 50.66 46.29
CDY34599 Canola plasma membrane 50.22 45.98
CDX85593 Canola golgi, peroxisome, plasma membrane, plastid 36.4 34.3
CDX91044 Canola golgi, peroxisome, plasma membrane, plastid 36.62 33.27
HORVU6Hr1G005750.1 Barley cytosol, plastid 2.85 12.87
Protein Annotations
EnsemblPlants:CDY26984EnsemblPlantsGene:GSBRNA2T00036756001Gene3D:1.20.1250.20GO:A0A078GP23GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sfPANTHER:PTHR23515PANTHER:PTHR23515:SF3
ProteinID:CDY26984ProteinID:CDY26984.1SEG:segSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE2E5F
UniProt:A0A078GP23MapMan:24.2.2.10MapMan:25.1.3.1:::
Description
BnaC09g35990DBnaC09g35990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GP23]
Coordinates
chrLK032197:-:534390..538175
Molecular Weight (calculated)
50065.1 Da
IEP (calculated)
9.382
GRAVY (calculated)
0.266
Length
456 amino acids
Sequence
(BLAST)
001: MTCVTGWRCS LPFCLTQKLK RSSAENSRRP ETLAVELSPL LSCAASLSSL SLSSPAPCSG GGDQISISSP LPLVSRSRSR LRYIAVRFMI GFCLATFVSC
101: QYWMSTMFNG QIIGLVNGTA AGWGNMGGGV TQLLMPLVYE IIRRLGSTSF TAWRMAFFVP GWMHIIMGIL VLTLGQDLPD GNRSTLEKKG AVTKDKFSKV
201: LWYAITNYRT WVFVLLYGYS MGVELTTDNV IAEYFFDRFH LKLHTAGIIA ASFGMANFFA RPIGGWASDI SARYFGMRGR LWTLWIIQTL GGCFCVLLGR
301: ATTLPTAVFS MILFSLGAQA ACGATFAIIP FISRRSLGII SGLTGAGGNF GSGLTQLVFF STSTFTTEQG LTWMGVMIMA CTLPVTLVHF PQWGSMFLSS
401: TGDEVKSTEE YYYLKEWTET EKQKGMHEGS LKFAVNSRSE RGRLVAPGPD RTPEHV
Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.