Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- golgi 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93591 | Canola | golgi, peroxisome, plasma membrane | 98.48 | 97.63 |
| CDY32821 | Canola | cytosol, peroxisome, plasma membrane | 96.3 | 95.47 |
| CDY22704 | Canola | cytosol, peroxisome, plasma membrane | 95.87 | 95.25 |
| Bra018656.1-P | Field mustard | golgi, peroxisome, plasma membrane | 99.57 | 94.05 |
| CDY06298 | Canola | golgi, peroxisome, plasma membrane | 81.74 | 89.31 |
| AT1G08090.1 | Thale cress | cytosol, peroxisome, plasma membrane | 95.43 | 82.83 |
| CDY22703 | Canola | golgi, peroxisome, plasma membrane | 84.78 | 77.69 |
| CDY72274 | Canola | plasma membrane | 59.57 | 77.62 |
| CDY06299 | Canola | golgi, peroxisome, plasma membrane | 85.0 | 77.27 |
| CDY70994 | Canola | golgi, plasma membrane | 59.13 | 77.05 |
| AT1G08100.1 | Thale cress | cytosol, peroxisome, plasma membrane | 84.78 | 74.71 |
| VIT_06s0061g00320.t01 | Wine grape | peroxisome | 81.3 | 70.57 |
| HORVU6Hr1G005750.1 | Barley | cytosol, plastid | 15.43 | 70.3 |
| KRH22855 | Soybean | peroxisome | 80.43 | 69.81 |
| KRH30604 | Soybean | peroxisome | 80.0 | 69.43 |
| KRH26509 | Soybean | peroxisome | 80.0 | 69.43 |
| GSMUA_Achr8P14230_001 | Banana | golgi, peroxisome, plasma membrane | 70.87 | 64.94 |
| CDY68730 | Canola | endoplasmic reticulum, plasma membrane | 55.0 | 64.38 |
| VIT_06s0061g00310.t01 | Wine grape | plasma membrane | 34.57 | 63.86 |
| GSMUA_Achr11P... | Banana | cytosol | 66.74 | 63.69 |
| TraesCS6A01G030900.1 | Wheat | plasma membrane | 69.57 | 63.12 |
| Zm00001d054057_P001 | Maize | extracellular | 71.74 | 62.98 |
| TraesCS6D01G035900.1 | Wheat | plasma membrane | 69.35 | 62.92 |
| Zm00001d054060_P001 | Maize | plastid | 71.52 | 62.79 |
| TraesCS6A01G031000.1 | Wheat | plasma membrane | 69.13 | 62.72 |
| HORVU6Hr1G005590.1 | Barley | plasma membrane | 69.13 | 62.72 |
| TraesCS6A01G030700.1 | Wheat | plastid | 68.91 | 62.52 |
| TraesCS6B01G044300.1 | Wheat | plasma membrane | 68.91 | 62.52 |
| Os02t0112100-01 | Rice | golgi, plasma membrane, plastid | 72.39 | 62.48 |
| Os02t0112600-01 | Rice | golgi, plasma membrane, plastid | 72.39 | 62.48 |
| TraesCS6A01G031100.1 | Wheat | plastid | 68.7 | 62.33 |
| TraesCS6B01G044100.1 | Wheat | plastid | 68.7 | 62.33 |
| TraesCS6A01G031200.1 | Wheat | plasma membrane | 68.91 | 62.28 |
| TraesCS6B01G044200.1 | Wheat | plasma membrane | 68.48 | 62.13 |
| TraesCS6D01G035800.1 | Wheat | plasma membrane | 68.48 | 62.13 |
| TraesCS6A01G030800.1 | Wheat | plasma membrane | 68.48 | 62.13 |
| TraesCS6D01G035700.1 | Wheat | plasma membrane | 68.48 | 62.13 |
| TraesCS6B01G044000.1 | Wheat | plasma membrane | 68.7 | 62.08 |
| TraesCS6D01G035600.1 | Wheat | plasma membrane | 68.48 | 61.89 |
| EES06135 | Sorghum | golgi, peroxisome, plasma membrane | 70.87 | 61.86 |
| EES04351 | Sorghum | golgi, peroxisome, plasma membrane | 70.87 | 61.86 |
| KRH25078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 58.7 | 60.54 |
| HORVU6Hr1G005600.2 | Barley | endoplasmic reticulum | 65.87 | 59.53 |
| HORVU6Hr1G005580.1 | Barley | plastid | 68.91 | 58.17 |
| TraesCS2A01G074800.1 | Wheat | plasma membrane | 63.04 | 57.77 |
| HORVU6Hr1G005570.1 | Barley | golgi, plasma membrane | 34.13 | 57.72 |
| CDY26984 | Canola | plasma membrane | 56.96 | 57.46 |
| TraesCS6D01G037800.1 | Wheat | plasma membrane | 63.26 | 57.4 |
| TraesCS2D01G073500.1 | Wheat | plasma membrane | 62.17 | 57.31 |
| TraesCS6B01G046600.1 | Wheat | plasma membrane | 63.04 | 56.97 |
| CDY69111 | Canola | peroxisome | 59.35 | 56.88 |
| CDY50324 | Canola | plasma membrane | 59.13 | 56.67 |
| HORVU6Hr1G005780.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 56.74 | 56.62 |
| TraesCS6B01G046500.1 | Wheat | plasma membrane | 62.39 | 56.61 |
| TraesCS6D01G037900.1 | Wheat | plasma membrane | 62.61 | 56.58 |
| TraesCS6A01G033000.1 | Wheat | plasma membrane | 62.61 | 56.58 |
| TraesCS6A01G032900.1 | Wheat | golgi, plasma membrane, vacuole | 62.61 | 56.58 |
| TraesCS6A01G032800.1 | Wheat | plasma membrane | 62.17 | 56.41 |
| TraesCS6D01G038100.1 | Wheat | golgi, plasma membrane, vacuole | 62.39 | 56.39 |
| TraesCS6A01G033100.1 | Wheat | plasma membrane | 62.17 | 56.3 |
| TraesCS6D01G037200.1 | Wheat | golgi, plasma membrane, plastid | 62.17 | 56.3 |
| TraesCS6A01G032400.1 | Wheat | plastid | 62.17 | 56.3 |
| TraesCS6D01G038200.1 | Wheat | plasma membrane | 62.17 | 56.3 |
| TraesCS6B01G044400.1 | Wheat | plastid | 69.13 | 56.28 |
| TraesCS6D01G038000.1 | Wheat | plasma membrane | 61.96 | 56.21 |
| HORVU6Hr1G005770.1 | Barley | plasma membrane | 62.17 | 56.19 |
| TraesCS6D01G037300.1 | Wheat | golgi, plasma membrane, plastid | 61.96 | 56.1 |
| TraesCS6B01G046700.1 | Wheat | plasma membrane | 61.96 | 56.1 |
| TraesCS6B01G045600.1 | Wheat | golgi, plasma membrane, vacuole | 61.96 | 56.1 |
| TraesCS6A01G032500.1 | Wheat | plastid | 61.96 | 56.1 |
| EES04350 | Sorghum | plastid | 65.22 | 56.07 |
| TraesCS6B01G045700.1 | Wheat | plastid | 61.52 | 55.93 |
| HORVU6Hr1G005930.1 | Barley | plasma membrane | 61.74 | 55.91 |
| TraesCS6D01G038300.1 | Wheat | plasma membrane | 61.74 | 55.91 |
| TraesCS6A01G033200.1 | Wheat | plasma membrane | 61.3 | 55.51 |
| Zm00001d014976_P001 | Maize | plasma membrane | 62.83 | 55.36 |
| TraesCS6B01G044500.1 | Wheat | plastid | 57.61 | 54.64 |
| CDY21075 | Canola | plasma membrane | 55.87 | 51.5 |
| HORVU6Hr1G005720.1 | Barley | extracellular | 42.39 | 51.45 |
| CDY34599 | Canola | plasma membrane | 55.65 | 51.41 |
| CDY31024 | Canola | endoplasmic reticulum, plasma membrane | 17.17 | 51.3 |
| CDY31023 | Canola | endoplasmic reticulum, extracellular | 8.7 | 47.62 |
| CDY53125 | Canola | plastid | 18.7 | 46.74 |
| CDX99169 | Canola | cytosol | 7.17 | 44.0 |
| CDX85593 | Canola | golgi, peroxisome, plasma membrane, plastid | 42.83 | 40.7 |
| CDX91044 | Canola | golgi, peroxisome, plasma membrane, plastid | 42.17 | 38.65 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | GO:A0A078DXH8 | EnsemblPlants:CDX93592 | ProteinID:CDX93592 |
| ProteinID:CDX93592.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00156272001 | InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom | InterPro:MFS_trans_sf |
| PFAM:PF07690 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | SUPFAM:SSF103473 | TMHMM:TMhelix | UniParc:UPI0004EDF2DB |
| SEG:seg | : | : | : | : | : |
Description
BnaA06g04560D
Coordinates
chrLK031876:-:846441..848795
Molecular Weight (calculated)
50269.9 Da
IEP (calculated)
8.899
GRAVY (calculated)
0.209
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ TFAFSVASPI VPTDKTAKFD LPVDSEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVHD AGGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGQDL PDGNRSALEK KGEVAKDKFG KIMWYAVTNY RTWIFVLLYG YSMGVELSTD NVIAEYFFDR FHLKLHTAGI IAASFGMANF
301: FARPAGGYAS DLAAKYFGMR GRLWALWIIQ TAGGLFCVWL GRANTLVTAV VAMILFSLGA QAACGATFAI VPFVSRRALV ACTLPVTLIH FPQWGSMFLP
401: PSTDPVKGTE EHYYASEWNE QEKEKNMHQG SLRFAKNAKS EGGRRVRSAA TPPENTPNNV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVHD AGGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGQDL PDGNRSALEK KGEVAKDKFG KIMWYAVTNY RTWIFVLLYG YSMGVELSTD NVIAEYFFDR FHLKLHTAGI IAASFGMANF
301: FARPAGGYAS DLAAKYFGMR GRLWALWIIQ TAGGLFCVWL GRANTLVTAV VAMILFSLGA QAACGATFAI VPFVSRRALV ACTLPVTLIH FPQWGSMFLP
401: PSTDPVKGTE EHYYASEWNE QEKEKNMHQG SLRFAKNAKS EGGRRVRSAA TPPENTPNNV
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.