Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G50200.1 | CDX93592 | AT1G08090.1 | 17012411 |
| AT5G50200.1 | CDY50324 | AT5G60780.1 | 17012411 |
| AT5G50200.1 | CDY69111 | AT5G60780.1 | 17012411 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037934.1-P | Field mustard | endoplasmic reticulum, extracellular | 93.87 | 95.67 |
| CDY05799 | Canola | cytosol, endoplasmic reticulum, plastid | 48.58 | 91.15 |
| CDY16372 | Canola | extracellular | 90.57 | 90.57 |
| CDX91545 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 88.21 | 88.21 |
| CDY64637 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 83.96 | 86.41 |
| CDY34047 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 82.08 | 84.47 |
| CDX83019 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 77.83 | 80.1 |
| AT5G50200.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 74.06 | 74.76 |
| CDY03424 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 58.02 | 59.13 |
| VIT_17s0000g09470.t01 | Wine grape | endoplasmic reticulum, vacuole | 48.58 | 51.24 |
| GSMUA_Achr9P01940_001 | Banana | endoplasmic reticulum | 47.17 | 50.51 |
| GSMUA_Achr6P12130_001 | Banana | endoplasmic reticulum, extracellular | 47.17 | 50.0 |
| KRH57152 | Soybean | endoplasmic reticulum, extracellular | 47.64 | 48.56 |
| KRH03862 | Soybean | endoplasmic reticulum, extracellular | 47.64 | 48.56 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 46.7 | 48.53 |
| CDY34305 | Canola | extracellular, plasma membrane, plastid | 57.55 | 46.56 |
| Solyc03g112100.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 43.4 | 45.32 |
| EES07094 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 42.92 | 43.13 |
| Zm00001d017095_P001 | Maize | extracellular | 41.04 | 42.86 |
| Os02t0595900-01 | Rice | plasma membrane | 40.09 | 41.26 |
| HORVU6Hr1G053710.1 | Barley | extracellular | 37.74 | 40.4 |
| TraesCS5D01G506100.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 37.26 | 39.7 |
| TraesCS6A01G209900.1 | Wheat | extracellular | 36.79 | 39.39 |
| TraesCS6B01G238700.1 | Wheat | extracellular | 36.79 | 39.39 |
| TraesCS6D01G193100.1 | Wheat | extracellular | 36.79 | 39.39 |
| TraesCS6D01G193200.2 | Wheat | plasma membrane | 36.79 | 39.39 |
| Os04t0480200-01 | Rice | plasma membrane | 38.21 | 38.57 |
| TraesCS6B01G238800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 35.85 | 38.38 |
| Zm00001d003287_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 34.43 | 37.06 |
| KXG26563 | Sorghum | extracellular, plasma membrane, vacuole | 34.43 | 33.64 |
| TraesCS4A01G367300.1 | Wheat | plastid | 37.74 | 31.37 |
| HORVU5Hr1G115500.4 | Barley | mitochondrion, plastid | 37.26 | 30.15 |
| TraesCS6A01G210000.1 | Wheat | endoplasmic reticulum | 35.38 | 29.88 |
| Solyc03g112090.2.1 | Tomato | extracellular | 15.57 | 28.7 |
| PGSC0003DMT400046695 | Potato | endoplasmic reticulum, golgi, plasma membrane | 41.04 | 26.28 |
Protein Annotations
| EnsemblPlants:CDX71613 | EnsemblPlantsGene:GSBRNA2T00152188001 | GO:A0A078C9E6 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0010167 |
| GO:GO:0015706 | InterPro:Transptr_NO3_Nar2 | PANTHER:PTHR34806 | PANTHER:PTHR34806:SF1 | PFAM:PF16974 | PIRSF:PIRSF012939 |
| ProteinID:CDX71613 | ProteinID:CDX71613.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EC115C |
| MapMan:25.1.3.2 | : | : | : | : | : |
Description
BnaC09g26540D
Coordinates
chrLK031794:+:1425463..1426714
Molecular Weight (calculated)
23586.3 Da
IEP (calculated)
8.885
GRAVY (calculated)
-0.102
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIHKILFAS LLICLLIQSI HAATKERLFS DLEKSALEVT ATPSRVGEGV VLAAGVDKLS ITWKVSSTAT KEPEFNAIKV KLCYAPASQV DRPWRKTENE
101: LFKDKSCPHK ISSWSYDPAM KTAQSFDYTL ERDIPTGTYF VRAYAVDAKD HEVAFGQSTN EDKTSNLFSV QAISGRHKSL DIASVCFSVF SVVALLVFFV
201: NEKRKAKIEQ SK
101: LFKDKSCPHK ISSWSYDPAM KTAQSFDYTL ERDIPTGTYF VRAYAVDAKD HEVAFGQSTN EDKTSNLFSV QAISGRHKSL DIASVCFSVF SVVALLVFFV
201: NEKRKAKIEQ SK
001: MAIQKILFAS LLICSLIQSI HGAEKVRLFK ELDKGALDVT TKPSREGPGV VLDAGKDTLN ITWTLSSIGS KREAEFKIIK VKLCYAPPSQ VDRPWRKTHD
101: ELFKDKTCPH KIIAKPYDKT LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI ASICFSVFSV VALVVFFVNE
201: KRKAKIEQSK
101: ELFKDKTCPH KIIAKPYDKT LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI ASICFSVFSV VALVVFFVNE
201: KRKAKIEQSK
Arabidopsis Description
NRT3.1High-affinity nitrate transporter 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGS5]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.