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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • mitochondrion 1
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, plasma membrane
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:mitochondrion
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr8P14230_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G50200.1 GSMUA_Achr11P... AT1G08090.1 17012411
AT5G50200.1 GSMUA_Achr8P14230_001 AT1G08090.1 17012411
AT5G50200.1 GSMUA_Achr11P... AT5G60780.1 17012411
AT5G50200.1 GSMUA_Achr8P14230_001 AT5G60780.1 17012411
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P12130_001 Banana endoplasmic reticulum, extracellular 73.53 75.0
GSMUA_Achr9P01940_001 Banana endoplasmic reticulum 67.65 69.7
VIT_17s0000g09470.t01 Wine grape endoplasmic reticulum, vacuole 57.84 58.71
CDY05799 Canola cytosol, endoplasmic reticulum, plastid 31.37 56.64
TraesCS5D01G506100.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.45 53.77
HORVU6Hr1G053710.1 Barley extracellular 51.47 53.03
TraesCS6D01G193200.2 Wheat plasma membrane 50.98 52.53
TraesCS6D01G193100.1 Wheat extracellular 50.98 52.53
TraesCS6B01G238700.1 Wheat extracellular 50.49 52.02
TraesCS6A01G209900.1 Wheat extracellular 50.49 52.02
Os02t0595900-01 Rice plasma membrane 52.45 51.94
TraesCS6B01G238800.1 Wheat endoplasmic reticulum, extracellular, vacuole 50.0 51.52
KRH57152 Soybean endoplasmic reticulum, extracellular 52.45 51.44
KRH03862 Soybean endoplasmic reticulum, extracellular 52.45 51.44
Zm00001d017095_P001 Maize extracellular 50.49 50.74
EES07094 Sorghum endoplasmic reticulum, extracellular, plasma membrane 52.45 50.71
Bra013828.1-P Field mustard cytosol 37.25 49.35
Bra037934.1-P Field mustard endoplasmic reticulum, extracellular 49.02 48.08
Solyc03g112100.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 47.55 47.78
Os04t0480200-01 Rice plasma membrane 49.02 47.62
Zm00001d003287_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 45.59 47.21
CDX71613 Canola endoplasmic reticulum, extracellular 48.53 46.7
CDY34047 Canola endoplasmic reticulum, extracellular, plasma membrane 47.06 46.6
CDY64637 Canola endoplasmic reticulum, extracellular, plasma membrane 47.06 46.6
Bra000613.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 47.06 46.6
CDX83019 Canola endoplasmic reticulum, extracellular, plasma membrane 46.57 46.12
AT5G50200.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 47.06 45.71
CDX91545 Canola endoplasmic reticulum, extracellular, plasma membrane 47.06 45.28
CDY16372 Canola extracellular 47.06 45.28
Bra022511.1-P Field mustard extracellular 47.06 45.28
KXG26563 Sorghum extracellular, plasma membrane, vacuole 48.04 45.16
Bra033790.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 45.1 44.66
TraesCS4A01G367300.1 Wheat plastid 52.94 42.35
CDY03424 Canola endoplasmic reticulum, extracellular, plasma membrane 43.14 42.31
HORVU5Hr1G115500.4 Barley mitochondrion, plastid 52.45 40.84
TraesCS6A01G210000.1 Wheat endoplasmic reticulum 50.0 40.64
AT4G24715.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 44.12 38.96
CDY34305 Canola extracellular, plasma membrane, plastid 42.16 32.82
Solyc03g112090.2.1 Tomato extracellular 17.16 30.43
PGSC0003DMT400046695 Potato endoplasmic reticulum, golgi, plasma membrane 46.08 28.4
Protein Annotations
EnsemblPlants:GSMUA_Achr10P16750_001EnsemblPlants:GSMUA_Achr10T16750_001EnsemblPlantsGene:GSMUA_Achr10G16750_001GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0010167GO:GO:0015706GO:GO:0016020GO:GO:0016021InterPro:Transptr_NO3_Nar2PANTHER:PTHR34806
PFAM:PF16974PIRSF:PIRSF012939SEG:segSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002969365
UniProt:M0RIV0MapMan:25.1.3.2::::
Description
high affinity nitrate transporter, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G16750_001]
Coordinates
chr10:+:24161271..24162362
Molecular Weight (calculated)
21965.6 Da
IEP (calculated)
9.708
GRAVY (calculated)
0.269
Length
204 amino acids
Sequence
(BLAST)
001: MAALLSCQVR VLPLLLLLLL CYLGPSAAVL FSSLPKTIIV TASPSPGQVL YAGVDQMNVT WAINQSLPGA TVSAYKKVKV SFCYAPASQA DRGWRKTDDN
101: LKKDKTCQFK ITTQPYATAG SVAYTVERSI PTATFFVRAY VLDSEDAEVA YGQSTNAQKT TNLFDVVGIT GRHSSLGIAA ACFSAFSVVA LAFFFVVEKR
201: KAKK
Best Arabidopsis Sequence Match ( AT5G50200.1 )
(BLAST)
001: MAIQKILFAS LLICSLIQSI HGAEKVRLFK ELDKGALDVT TKPSREGPGV VLDAGKDTLN ITWTLSSIGS KREAEFKIIK VKLCYAPPSQ VDRPWRKTHD
101: ELFKDKTCPH KIIAKPYDKT LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI ASICFSVFSV VALVVFFVNE
201: KRKAKIEQSK
Arabidopsis Description
NRT3.1High-affinity nitrate transporter 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGS5]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.