Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003287_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 69.59 | 76.65 |
| Os04t0480200-01 | Rice | plasma membrane | 65.44 | 67.62 |
| EES07094 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 55.76 | 57.35 |
| GSMUA_Achr6P12130_001 | Banana | endoplasmic reticulum, extracellular | 49.77 | 54.0 |
| GSMUA_Achr9P01940_001 | Banana | endoplasmic reticulum | 47.0 | 51.52 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 45.16 | 48.04 |
| VIT_17s0000g09470.t01 | Wine grape | endoplasmic reticulum, vacuole | 43.78 | 47.26 |
| KRH57152 | Soybean | endoplasmic reticulum, extracellular | 41.94 | 43.75 |
| KRH03862 | Soybean | endoplasmic reticulum, extracellular | 41.01 | 42.79 |
| Solyc03g112100.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 37.33 | 39.9 |
| Bra013828.1-P | Field mustard | cytosol | 27.19 | 38.31 |
| AT5G50200.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 34.1 | 35.24 |
| CDY34047 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.72 | 34.47 |
| CDY64637 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.72 | 34.47 |
| CDX83019 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.72 | 34.47 |
| Bra033790.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 32.72 | 34.47 |
| Bra000613.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 32.72 | 34.47 |
| CDX71613 | Canola | endoplasmic reticulum, extracellular | 33.64 | 34.43 |
| Bra037934.1-P | Field mustard | endoplasmic reticulum, extracellular | 32.72 | 34.13 |
| CDY03424 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 32.26 | 33.65 |
| CDY05799 | Canola | cytosol, endoplasmic reticulum, plastid | 17.05 | 32.74 |
| CDY16372 | Canola | extracellular | 31.8 | 32.55 |
| CDX91545 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 31.8 | 32.55 |
| Bra022511.1-P | Field mustard | extracellular | 31.8 | 32.55 |
| AT4G24715.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 30.88 | 29.0 |
| Solyc03g112090.2.1 | Tomato | extracellular | 14.75 | 27.83 |
| CDY34305 | Canola | extracellular, plasma membrane, plastid | 32.26 | 26.72 |
| PGSC0003DMT400046695 | Potato | endoplasmic reticulum, golgi, plasma membrane | 38.71 | 25.38 |
Protein Annotations
| MapMan:25.1.3.2 | UniProt:A0A1B6PLL4 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0010167 |
| GO:GO:0015706 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlants:KXG26563 | ProteinID:KXG26563 | ProteinID:KXG26563.1 |
| ProteinID:OQU81804.1 | PFAM:PF16974 | PIRSF:PIRSF012939 | PFscan:PS51257 | PANTHER:PTHR34806 | PANTHER:PTHR34806:SF2 |
| EnsemblPlantsGene:SORBI_3006G121200 | SignalP:SignalP-noTM | TMHMM:TMhelix | InterPro:Transptr_NO3_Nar2 | UniParc:UPI00081AE650 | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:-:48781505..48785522
Molecular Weight (calculated)
22335.7 Da
IEP (calculated)
9.327
GRAVY (calculated)
0.210
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MMARSGAALP LPLVVVVVVV GACCGSVRPA AAAAARLSAL GRTLVVEASP EAGQVLHAGE DTITVTWRLN ASAPAGADAG YKAVKVTLCY APASQEDRGW
101: RKANDDLSKD KACQFEIAQP QPYAYAAAAG PGTGAGTTLR YRVARDVPTA SYHVRAYALD ASGAPVGYGQ TAPAYYFRVA GVTGIHASLR VAAAVLSALS
201: VAALAFFAVV EKRRKDE
101: RKANDDLSKD KACQFEIAQP QPYAYAAAAG PGTGAGTTLR YRVARDVPTA SYHVRAYALD ASGAPVGYGQ TAPAYYFRVA GVTGIHASLR VAAAVLSALS
201: VAALAFFAVV EKRRKDE
001: MAIQKILFAS LLICSLIQSI HGAEKVRLFK ELDKGALDVT TKPSREGPGV VLDAGKDTLN ITWTLSSIGS KREAEFKIIK VKLCYAPPSQ VDRPWRKTHD
101: ELFKDKTCPH KIIAKPYDKT LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI ASICFSVFSV VALVVFFVNE
201: KRKAKIEQSK
101: ELFKDKTCPH KIIAKPYDKT LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI ASICFSVFSV VALVVFFVNE
201: KRKAKIEQSK
Arabidopsis Description
NRT3.1High-affinity nitrate transporter 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGS5]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.