Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, nucleus
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr8P14230_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G50200.1 GSMUA_Achr11P... AT1G08090.1 17012411
AT5G50200.1 GSMUA_Achr8P14230_001 AT1G08090.1 17012411
AT5G50200.1 GSMUA_Achr11P... AT5G60780.1 17012411
AT5G50200.1 GSMUA_Achr8P14230_001 AT5G60780.1 17012411
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 75.0 73.53
GSMUA_Achr9P01940_001 Banana endoplasmic reticulum 69.5 70.2
VIT_17s0000g09470.t01 Wine grape endoplasmic reticulum, vacuole 61.0 60.7
KRH03862 Soybean endoplasmic reticulum, extracellular 60.0 57.69
TraesCS6D01G193200.2 Wheat plasma membrane 57.0 57.58
TraesCS6D01G193100.1 Wheat extracellular 57.0 57.58
TraesCS6B01G238800.1 Wheat endoplasmic reticulum, extracellular, vacuole 57.0 57.58
TraesCS6B01G238700.1 Wheat extracellular 57.0 57.58
KRH57152 Soybean endoplasmic reticulum, extracellular 59.5 57.21
TraesCS6A01G209900.1 Wheat extracellular 56.5 57.07
HORVU6Hr1G053710.1 Barley extracellular 56.5 57.07
TraesCS5D01G506100.1 Wheat endoplasmic reticulum, extracellular, vacuole 56.5 56.78
Zm00001d017095_P001 Maize extracellular 57.0 56.16
Os02t0595900-01 Rice plasma membrane 56.0 54.37
EES07094 Sorghum endoplasmic reticulum, extracellular, plasma membrane 57.0 54.03
CDY05799 Canola cytosol, endoplasmic reticulum, plastid 30.0 53.1
Solyc03g112100.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 53.5 52.71
Zm00001d003287_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 51.0 51.78
Os04t0480200-01 Rice plasma membrane 53.5 50.95
CDY34047 Canola endoplasmic reticulum, extracellular, plasma membrane 51.5 50.0
KXG26563 Sorghum extracellular, plasma membrane, vacuole 54.0 49.77
AT5G50200.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 52.0 49.52
Bra013828.1-P Field mustard cytosol 38.0 49.35
Bra000613.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 50.5 49.03
CDY64637 Canola endoplasmic reticulum, extracellular, plasma membrane 50.5 49.03
CDX83019 Canola endoplasmic reticulum, extracellular, plasma membrane 50.0 48.54
Bra037934.1-P Field mustard endoplasmic reticulum, extracellular 50.0 48.08
Bra033790.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 49.0 47.57
CDX91545 Canola endoplasmic reticulum, extracellular, plasma membrane 50.0 47.17
CDX71613 Canola endoplasmic reticulum, extracellular 50.0 47.17
Bra022511.1-P Field mustard extracellular 49.5 46.7
CDY16372 Canola extracellular 49.5 46.7
TraesCS6A01G210000.1 Wheat endoplasmic reticulum 56.5 45.02
TraesCS4A01G367300.1 Wheat plastid 55.5 43.53
CDY03424 Canola endoplasmic reticulum, extracellular, plasma membrane 45.0 43.27
HORVU5Hr1G115500.4 Barley mitochondrion, plastid 55.5 42.37
AT4G24715.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 46.5 40.26
CDY34305 Canola extracellular, plasma membrane, plastid 44.5 33.97
Solyc03g112090.2.1 Tomato extracellular 19.5 33.91
PGSC0003DMT400046695 Potato endoplasmic reticulum, golgi, plasma membrane 54.0 32.63
Protein Annotations
EnsemblPlants:GSMUA_Achr6P12130_001EnsemblPlants:GSMUA_Achr6T12130_001EnsemblPlantsGene:GSMUA_Achr6G12130_001GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0010167GO:GO:0015706GO:GO:0016020GO:GO:0016021InterPro:Transptr_NO3_Nar2PANTHER:PTHR34806
PFAM:PF16974PIRSF:PIRSF012939SEG:segSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00029617A6
UniProt:M0T6B1MapMan:25.1.3.2::::
Description
high affinity nitrate transporter, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G12130_001]
Coordinates
chr6:+:8095121..8095997
Molecular Weight (calculated)
21562.9 Da
IEP (calculated)
9.576
GRAVY (calculated)
0.086
Length
200 amino acids
Sequence
(BLAST)
001: MAALLSNQAA ALLVLLCYIG PSAAVLFSSL PQTLRVTASP SPGQVLHAGV DEITVTWALN QSLPAGTDSG YKKVKVTLCY APVSQTDRGW RKTDDHLKKD
101: KTCQFKMATR PYAATGTVTY TVERNIPTAT FFVRAYVLDA SDTEVAYGQS TDPKKTTNLF DIAGITGRHA SLDIAAACFS AFSVVALAFF FVIEKRKAKK
Best Arabidopsis Sequence Match ( AT5G50200.1 )
(BLAST)
001: MAIQKILFAS LLICSLIQSI HGAEKVRLFK ELDKGALDVT TKPSREGPGV VLDAGKDTLN ITWTLSSIGS KREAEFKIIK VKLCYAPPSQ VDRPWRKTHD
101: ELFKDKTCPH KIIAKPYDKT LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI ASICFSVFSV VALVVFFVNE
201: KRKAKIEQSK
Arabidopsis Description
NRT3.1High-affinity nitrate transporter 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGS5]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.