Factsheet for Zm00001d017095_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014976_P001
Zm00001d054057_P001
Zm00001d054060_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50200.1	Zm00001d014976_P001	AT1G08090.1	17012411
AT5G50200.1	Zm00001d054057_P001	AT1G08090.1	17012411
AT5G50200.1	Zm00001d054060_P001	AT1G08090.1	17012411
AT5G50200.1	Zm00001d014976_P001	AT5G60780.1	17012411
AT5G50200.1	Zm00001d054057_P001	AT5G60780.1	17012411
AT5G50200.1	Zm00001d054060_P001	AT5G60780.1	17012411

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07094	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	76.35	73.46
Os02t0595900-01	Rice	plasma membrane	63.05	62.14
HORVU6Hr1G053710.1	Barley	extracellular	60.1	61.62
TraesCS6D01G193200.2	Wheat	plasma membrane	59.11	60.61
TraesCS6D01G193100.1	Wheat	extracellular	58.62	60.1
TraesCS6B01G238800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	58.62	60.1
TraesCS6B01G238700.1	Wheat	extracellular	58.62	60.1
TraesCS6A01G209900.1	Wheat	extracellular	58.13	59.6
TraesCS5D01G506100.1	Wheat	endoplasmic reticulum, extracellular, vacuole	58.13	59.3
GSMUA_Achr6P12130_001	Banana	endoplasmic reticulum, extracellular	56.16	57.0
Zm00001d003287_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	53.69	55.33
GSMUA_Achr9P01940_001	Banana	endoplasmic reticulum	53.69	55.05
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	50.74	50.49
VIT_17s0000g09470.t01	Wine grape	endoplasmic reticulum, vacuole	47.78	48.26
KRH03862	Soybean	endoplasmic reticulum, extracellular	48.77	47.6
KRH57152	Soybean	endoplasmic reticulum, extracellular	48.77	47.6
TraesCS4A01G367300.1	Wheat	plastid	59.61	47.45
HORVU5Hr1G115500.4	Barley	mitochondrion, plastid	60.1	46.56
TraesCS6A01G210000.1	Wheat	endoplasmic reticulum	56.65	45.82
AT5G50200.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	43.84	42.38
CDY64637	Canola	endoplasmic reticulum, extracellular, plasma membrane	42.36	41.75
Bra000613.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	42.36	41.75
CDY34047	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.87	41.26
Bra033790.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	41.87	41.26
CDX83019	Canola	endoplasmic reticulum, extracellular, plasma membrane	41.87	41.26
CDX71613	Canola	endoplasmic reticulum, extracellular	42.86	41.04
Solyc03g112100.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	40.89	40.89
Bra037934.1-P	Field mustard	endoplasmic reticulum, extracellular	40.89	39.9
Bra022511.1-P	Field mustard	extracellular	41.38	39.62
CDY16372	Canola	extracellular	41.38	39.62
Bra013828.1-P	Field mustard	cytosol	30.05	39.61
CDX91545	Canola	endoplasmic reticulum, extracellular, plasma membrane	40.89	39.15
CDY05799	Canola	cytosol, endoplasmic reticulum, plastid	21.67	38.94
CDY03424	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.44	36.54
AT4G24715.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	36.95	32.47
Solyc03g112090.2.1	Tomato	extracellular	17.24	30.43
CDY34305	Canola	extracellular, plasma membrane, plastid	36.95	28.63
PGSC0003DMT400046695	Potato	endoplasmic reticulum, golgi, plasma membrane	41.38	25.38

Protein Annotations

MapMan:25.1.3.2	UniProt:A0A1D6HC37	ProteinID:AQK72263.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0010167	GO:GO:0015112	GO:GO:0015706	GO:GO:0016020
GO:GO:0016021	PFAM:PF16974	PIRSF:PIRSF012939	PANTHER:PTHR34806	SignalP:SignalP-noTM	TMHMM:TMhelix
InterPro:Transptr_NO3_Nar2	UniParc:UPI0001534ECE	EnsemblPlantsGene:Zm00001d017095	EnsemblPlants:Zm00001d017095_P001	EnsemblPlants:Zm00001d017095_T001	SEG:seg

Description

High affinity nitrate transporter

Coordinates

chr5:-:185262626..185263851

Molecular Weight (calculated)

21081.0 Da

IEP (calculated)

9.347

GRAVY (calculated)

0.153

Length

203 amino acids

Sequence
(BLAST)

001: MARQQSVQAL CVLAALLFAA SLPSPAAAGV HLSSLPKALD VTTSAKPGQV LHAGVDSLTV TWSLNATEPA GADAGYKGVK VKLCYAPASQ KDRGWRKSED
101: DISKDKACQF KVTEQAYAAA APGSFQYAVA RDVPSGSYYL RAFATDASGA EVAYGQTAPT AAFDVAGITG IHASLKIAAG VFSAFSVVAL AFFFVIETRK
201: KNK

Best Arabidopsis Sequence Match ( AT5G50200.1 )
(BLAST)

001: MAIQKILFAS LLICSLIQSI HGAEKVRLFK ELDKGALDVT TKPSREGPGV VLDAGKDTLN ITWTLSSIGS KREAEFKIIK VKLCYAPPSQ VDRPWRKTHD
101: ELFKDKTCPH KIIAKPYDKT LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI ASICFSVFSV VALVVFFVNE
201: KRKAKIEQSK

Arabidopsis Description

NRT3.1High-affinity nitrate transporter 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGS5]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.