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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 7
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, secretory
BaCelLo:secretory
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...
GSMUA_Achr8P14230_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G50200.1 GSMUA_Achr11P... AT1G08090.1 17012411
AT5G50200.1 GSMUA_Achr8P14230_001 AT1G08090.1 17012411
AT5G50200.1 GSMUA_Achr11P... AT5G60780.1 17012411
AT5G50200.1 GSMUA_Achr8P14230_001 AT5G60780.1 17012411
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P12130_001 Banana endoplasmic reticulum, extracellular 70.2 69.5
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane 69.7 67.65
VIT_17s0000g09470.t01 Wine grape endoplasmic reticulum, vacuole 61.11 60.2
CDY05799 Canola cytosol, endoplasmic reticulum, plastid 31.82 55.75
TraesCS6D01G193200.2 Wheat plasma membrane 54.55 54.55
TraesCS6D01G193100.1 Wheat extracellular 54.55 54.55
TraesCS6B01G238800.1 Wheat endoplasmic reticulum, extracellular, vacuole 54.55 54.55
TraesCS6B01G238700.1 Wheat extracellular 54.04 54.04
TraesCS6A01G209900.1 Wheat extracellular 54.04 54.04
Zm00001d017095_P001 Maize extracellular 55.05 53.69
HORVU6Hr1G053710.1 Barley extracellular 53.54 53.54
Os02t0595900-01 Rice plasma membrane 55.56 53.4
TraesCS5D01G506100.1 Wheat endoplasmic reticulum, extracellular, vacuole 53.54 53.27
KRH03862 Soybean endoplasmic reticulum, extracellular 55.05 52.4
EES07094 Sorghum endoplasmic reticulum, extracellular, plasma membrane 55.56 52.13
KRH57152 Soybean endoplasmic reticulum, extracellular 54.04 51.44
CDY64637 Canola endoplasmic reticulum, extracellular, plasma membrane 53.03 50.97
Bra000613.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 53.03 50.97
CDY34047 Canola endoplasmic reticulum, extracellular, plasma membrane 52.53 50.49
Zm00001d003287_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 50.0 50.25
CDX83019 Canola endoplasmic reticulum, extracellular, plasma membrane 52.02 50.0
Bra013828.1-P Field mustard cytosol 38.89 50.0
AT5G50200.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 52.02 49.05
Solyc03g112100.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 50.0 48.77
CDX91545 Canola endoplasmic reticulum, extracellular, plasma membrane 52.02 48.58
Bra033790.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 50.51 48.54
Bra037934.1-P Field mustard endoplasmic reticulum, extracellular 50.51 48.08
Os04t0480200-01 Rice plasma membrane 50.51 47.62
CDX71613 Canola endoplasmic reticulum, extracellular 50.51 47.17
Bra022511.1-P Field mustard extracellular 50.51 47.17
CDY16372 Canola extracellular 50.51 47.17
KXG26563 Sorghum extracellular, plasma membrane, vacuole 51.52 47.0
CDY03424 Canola endoplasmic reticulum, extracellular, plasma membrane 46.97 44.71
TraesCS6A01G210000.1 Wheat endoplasmic reticulum 53.54 42.23
TraesCS4A01G367300.1 Wheat plastid 53.03 41.18
HORVU5Hr1G115500.4 Barley mitochondrion, plastid 53.54 40.46
AT4G24715.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 45.96 39.39
CDY34305 Canola extracellular, plasma membrane, plastid 46.46 35.11
Solyc03g112090.2.1 Tomato extracellular 19.7 33.91
PGSC0003DMT400046695 Potato endoplasmic reticulum, golgi, plasma membrane 52.53 31.42
Protein Annotations
EnsemblPlants:GSMUA_Achr9P01940_001EnsemblPlants:GSMUA_Achr9T01940_001EnsemblPlantsGene:GSMUA_Achr9G01940_001GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0010167GO:GO:0015706GO:GO:0016020GO:GO:0016021InterPro:Transptr_NO3_Nar2PANTHER:PTHR34806
PFAM:PF16974PIRSF:PIRSF012939SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0002957F02UniProt:M0TWQ1
MapMan:25.1.3.2:::::
Description
high affinity nitrate transporter, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G01940_001]
Coordinates
chr9:-:1486464..1487140
Molecular Weight (calculated)
21274.5 Da
IEP (calculated)
9.732
GRAVY (calculated)
0.070
Length
198 amino acids
Sequence
(BLAST)
001: MATAPLLRLV LLVSCIGSSM AVLFSSLPNT LTVTSSPAAG QVLHAGVDQI KVSWKLNQST PASADSGYKK VKVLLCYDPV SQADRGWRKT DDHLKKDKTC
101: QFKVTTQPYS SGGGSFVYTV ERSIPTGTYF VRAYALDSGD TEVAYGQTTN AAKTTNLFDV VGITGRHASL DIAAGCFSAF SILALVFFFV VEKRKAKK
Best Arabidopsis Sequence Match ( AT5G50200.1 )
(BLAST)
001: MAIQKILFAS LLICSLIQSI HGAEKVRLFK ELDKGALDVT TKPSREGPGV VLDAGKDTLN ITWTLSSIGS KREAEFKIIK VKLCYAPPSQ VDRPWRKTHD
101: ELFKDKTCPH KIIAKPYDKT LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI ASICFSVFSV VALVVFFVNE
201: KRKAKIEQSK
Arabidopsis Description
NRT3.1High-affinity nitrate transporter 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FGS5]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.