Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50324 | Canola | plasma membrane | 97.5 | 97.5 |
| AT5G60780.1 | Thale cress | peroxisome | 92.5 | 82.37 |
| HORVU6Hr1G005750.1 | Barley | cytosol, plastid | 15.21 | 72.28 |
| VIT_06s0061g00310.t01 | Wine grape | plasma membrane | 37.08 | 71.49 |
| CDY31024 | Canola | endoplasmic reticulum, plasma membrane | 22.29 | 69.48 |
| CDY72274 | Canola | plasma membrane | 48.96 | 66.57 |
| KRH22855 | Soybean | peroxisome | 73.12 | 66.23 |
| KRH26509 | Soybean | peroxisome | 73.12 | 66.23 |
| KRH30604 | Soybean | peroxisome | 72.71 | 65.85 |
| CDY53125 | Canola | plastid | 25.0 | 65.22 |
| VIT_06s0061g00320.t01 | Wine grape | peroxisome | 71.67 | 64.91 |
| CDY70994 | Canola | golgi, plasma membrane | 47.5 | 64.59 |
| CDY31023 | Canola | endoplasmic reticulum, extracellular | 11.25 | 64.29 |
| Solyc06g010250.2.1 | Tomato | plasma membrane | 66.25 | 63.86 |
| GSMUA_Achr8P14230_001 | Banana | golgi, peroxisome, plasma membrane | 66.25 | 63.35 |
| PGSC0003DMT400050654 | Potato | plasma membrane | 69.17 | 63.24 |
| PGSC0003DMT400040689 | Potato | plasma membrane | 68.96 | 63.17 |
| Solyc11g069750.1.1 | Tomato | extracellular | 68.54 | 62.67 |
| GSMUA_Achr11P... | Banana | cytosol | 62.92 | 62.66 |
| HORVU6Hr1G005570.1 | Barley | golgi, plasma membrane | 34.79 | 61.4 |
| CDY68730 | Canola | endoplasmic reticulum, plasma membrane | 50.0 | 61.07 |
| CDY06299 | Canola | golgi, peroxisome, plasma membrane | 63.75 | 60.47 |
| CDY06298 | Canola | golgi, peroxisome, plasma membrane | 52.92 | 60.33 |
| CDY32821 | Canola | cytosol, peroxisome, plasma membrane | 58.12 | 60.13 |
| CDX99169 | Canola | cytosol | 9.38 | 60.0 |
| TraesCS6D01G035700.1 | Wheat | plasma membrane | 63.33 | 59.96 |
| HORVU6Hr1G005590.1 | Barley | plasma membrane | 63.33 | 59.96 |
| TraesCS6B01G044300.1 | Wheat | plasma membrane | 63.33 | 59.96 |
| TraesCS6D01G035900.1 | Wheat | plasma membrane | 63.33 | 59.96 |
| CDY22703 | Canola | golgi, peroxisome, plasma membrane | 62.71 | 59.96 |
| TraesCS6A01G031100.1 | Wheat | plastid | 63.12 | 59.76 |
| TraesCS6A01G031000.1 | Wheat | plasma membrane | 63.12 | 59.76 |
| TraesCS6A01G030900.1 | Wheat | plasma membrane | 63.12 | 59.76 |
| TraesCS6A01G030700.1 | Wheat | plastid | 63.12 | 59.76 |
| TraesCS6D01G035800.1 | Wheat | plasma membrane | 63.12 | 59.76 |
| TraesCS6B01G044100.1 | Wheat | plastid | 62.92 | 59.57 |
| TraesCS6B01G044200.1 | Wheat | plasma membrane | 62.92 | 59.57 |
| TraesCS6A01G030800.1 | Wheat | plasma membrane | 62.92 | 59.57 |
| CDX93591 | Canola | golgi, peroxisome, plasma membrane | 57.5 | 59.48 |
| CDX93592 | Canola | golgi, peroxisome, plasma membrane | 56.88 | 59.35 |
| EES06135 | Sorghum | golgi, peroxisome, plasma membrane | 64.58 | 58.82 |
| EES04351 | Sorghum | golgi, peroxisome, plasma membrane | 64.58 | 58.82 |
| KRH25078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 54.58 | 58.74 |
| TraesCS6B01G044000.1 | Wheat | plasma membrane | 62.29 | 58.74 |
| TraesCS6D01G035600.1 | Wheat | plasma membrane | 62.29 | 58.74 |
| Zm00001d054057_P001 | Maize | extracellular | 63.96 | 58.59 |
| Zm00001d054060_P001 | Maize | plastid | 63.96 | 58.59 |
| Os02t0112600-01 | Rice | golgi, plasma membrane, plastid | 65.0 | 58.54 |
| Os02t0112100-01 | Rice | golgi, plasma membrane, plastid | 65.0 | 58.54 |
| CDY22704 | Canola | cytosol, peroxisome, plasma membrane | 56.46 | 58.53 |
| TraesCS6A01G031200.1 | Wheat | plasma membrane | 61.46 | 57.96 |
| HORVU6Hr1G005780.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 55.21 | 57.48 |
| TraesCS6A01G032400.1 | Wheat | plastid | 60.83 | 57.48 |
| TraesCS6A01G032500.1 | Wheat | plastid | 60.83 | 57.48 |
| TraesCS6D01G037200.1 | Wheat | golgi, plasma membrane, plastid | 60.83 | 57.48 |
| TraesCS6D01G037800.1 | Wheat | plasma membrane | 60.62 | 57.4 |
| TraesCS6B01G045600.1 | Wheat | golgi, plasma membrane, vacuole | 60.62 | 57.28 |
| TraesCS6D01G037300.1 | Wheat | golgi, plasma membrane, plastid | 60.62 | 57.28 |
| TraesCS6D01G037900.1 | Wheat | plasma membrane | 60.62 | 57.17 |
| TraesCS6B01G046600.1 | Wheat | plasma membrane | 60.42 | 56.97 |
| TraesCS6B01G045700.1 | Wheat | plastid | 60.0 | 56.92 |
| TraesCS6A01G033000.1 | Wheat | plasma membrane | 60.21 | 56.78 |
| HORVU6Hr1G005720.1 | Barley | extracellular | 44.79 | 56.73 |
| Zm00001d014976_P001 | Maize | plasma membrane | 61.67 | 56.7 |
| TraesCS6A01G033200.1 | Wheat | plasma membrane | 60.0 | 56.69 |
| EES04350 | Sorghum | plastid | 63.12 | 56.64 |
| TraesCS6B01G046500.1 | Wheat | plasma membrane | 59.79 | 56.61 |
| TraesCS6A01G032800.1 | Wheat | plasma membrane | 59.79 | 56.61 |
| TraesCS6A01G032900.1 | Wheat | golgi, plasma membrane, vacuole | 60.0 | 56.58 |
| HORVU6Hr1G005930.1 | Barley | plasma membrane | 59.79 | 56.5 |
| TraesCS6D01G038200.1 | Wheat | plasma membrane | 59.79 | 56.5 |
| TraesCS6B01G046700.1 | Wheat | plasma membrane | 59.79 | 56.5 |
| TraesCS6D01G038100.1 | Wheat | golgi, plasma membrane, vacuole | 59.79 | 56.39 |
| TraesCS6D01G038300.1 | Wheat | plasma membrane | 59.58 | 56.3 |
| TraesCS6A01G033100.1 | Wheat | plasma membrane | 59.58 | 56.3 |
| HORVU6Hr1G005600.2 | Barley | endoplasmic reticulum | 59.58 | 56.19 |
| HORVU6Hr1G005770.1 | Barley | plasma membrane | 59.58 | 56.19 |
| HORVU6Hr1G005580.1 | Barley | plastid | 63.75 | 56.15 |
| TraesCS6D01G038000.1 | Wheat | plasma membrane | 58.54 | 55.42 |
| TraesCS6B01G044500.1 | Wheat | plastid | 55.42 | 54.85 |
| TraesCS6B01G044400.1 | Wheat | plastid | 63.75 | 54.16 |
| CDY26984 | Canola | plasma membrane | 51.25 | 53.95 |
| TraesCS2A01G074800.1 | Wheat | plasma membrane | 56.25 | 53.78 |
| TraesCS2D01G073500.1 | Wheat | plasma membrane | 55.83 | 53.71 |
| CDY21075 | Canola | plasma membrane | 52.29 | 50.3 |
| CDY34599 | Canola | plasma membrane | 52.08 | 50.2 |
| CDX85593 | Canola | golgi, peroxisome, plasma membrane, plastid | 39.58 | 39.26 |
| CDX91044 | Canola | golgi, peroxisome, plasma membrane, plastid | 39.58 | 37.85 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | GO:A0A078JU14 | UniProt:A0A078JU14 | EnsemblPlants:CDY69111 |
| ProteinID:CDY69111 | ProteinID:CDY69111.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00083075001 | InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | PFAM:PF07690 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | SUPFAM:SSF103473 | TMHMM:TMhelix |
| UniParc:UPI0004EEF961 | SEG:seg | : | : | : | : |
Description
BnaC09g54030DBnaC09g54030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JU14]
Coordinates
chrLK038669:-:2565..4431
Molecular Weight (calculated)
52021.0 Da
IEP (calculated)
8.373
GRAVY (calculated)
0.351
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNEEGSIG TSLHGVTAKE HVFSFSADAS SQVVPSNDPT SKFALPVDSE HRAKVFNPLS FAKPHMRAFH LGWISFFTCF ISTFAAAPLV PIIRDNLDLT
101: KTDIGNAGVA SVSGAIFSRL AMGAVCDLLG ARVMFNGKII GLVNGCAGGW GDMGGGVTQL LMPMVFHVIK LAGATPFMAW RISFFVPGFL QVVMGILVLT
201: FGQDLPDGNL STLQKSGQVF WFAVKNYRTW ILFVLYGFSM GIELTINNVI SGYFFDRFNL KLQTAGIVAA SFGMANFFSR PFGGYASDVA ARLFGMRGRL
301: WILWIFQTVG ALFCIWLGRA NSLPIAILAM ILFSIGTQAA CGAFFEVAPF VSRRSLGLIS GLTGAGGNFG SGSTQLLFFS TSRFSTAEGL SLMGAMAVLC
401: TLPVAFIHFP QWGSMFLRPS SDGERSKEEY YYSSEWTEDE KQQGLHEGSI KFAENSRSER SRKVALADFP TPETGTLTHV
101: KTDIGNAGVA SVSGAIFSRL AMGAVCDLLG ARVMFNGKII GLVNGCAGGW GDMGGGVTQL LMPMVFHVIK LAGATPFMAW RISFFVPGFL QVVMGILVLT
201: FGQDLPDGNL STLQKSGQVF WFAVKNYRTW ILFVLYGFSM GIELTINNVI SGYFFDRFNL KLQTAGIVAA SFGMANFFSR PFGGYASDVA ARLFGMRGRL
301: WILWIFQTVG ALFCIWLGRA NSLPIAILAM ILFSIGTQAA CGAFFEVAPF VSRRSLGLIS GLTGAGGNFG SGSTQLLFFS TSRFSTAEGL SLMGAMAVLC
401: TLPVAFIHFP QWGSMFLRPS SDGERSKEEY YYSSEWTEDE KQQGLHEGSI KFAENSRSER SRKVALADFP TPETGTLTHV
001: MTHNHSNEEG SIGTSLHGVT AREQVFSFSV DASSQTVQSD DPTAKFALPV DSEHRAKVFN PLSFAKPHMR AFHLGWLSFF TCFISTFAAA PLVPIIRDNL
101: DLTKTDIGNA GVASVSGAIF SRLAMGAVCD LLGARYGTAF SLMLTAPTVF SMSFVGGPSG YLGVRFMIGF CLATFVSCQY WTSVMFNGKI IGLVNGCAGG
201: WGDMGGGVTQ LLMPMVFHVI KLAGATPFMA WRIAFFVPGF LQVVMGILVL SLGQDLPDGN LSTLQKSGQV SKDKFSKVFW FAVKNYRTWI LFVLYGSSMG
301: IELTINNVIS GYFYDRFNLK LQTAGIVAAS FGMANFIARP FGGYASDVAA RVFGMRGRLW TLWIFQTVGA LFCIWLGRAS SLPIAILAMM LFSIGTQAAC
401: GALFGVAPFV SRRSLGLISG LTGAGGNFGS GLTQLLFFSS ARFSTAEGLS LMGVMAVLCT LPVAFIHFPQ WGSMFLRPST DGERSQEEYY YGSEWTENEK
501: QQGLHEGSIK FAENSRSERG RKVALANIPT PENGTPSHV
101: DLTKTDIGNA GVASVSGAIF SRLAMGAVCD LLGARYGTAF SLMLTAPTVF SMSFVGGPSG YLGVRFMIGF CLATFVSCQY WTSVMFNGKI IGLVNGCAGG
201: WGDMGGGVTQ LLMPMVFHVI KLAGATPFMA WRIAFFVPGF LQVVMGILVL SLGQDLPDGN LSTLQKSGQV SKDKFSKVFW FAVKNYRTWI LFVLYGSSMG
301: IELTINNVIS GYFYDRFNLK LQTAGIVAAS FGMANFIARP FGGYASDVAA RVFGMRGRLW TLWIFQTVGA LFCIWLGRAS SLPIAILAMM LFSIGTQAAC
401: GALFGVAPFV SRRSLGLISG LTGAGGNFGS GLTQLLFFSS ARFSTAEGLS LMGVMAVLCT LPVAFIHFPQ WGSMFLRPST DGERSQEEYY YGSEWTENEK
501: QQGLHEGSIK FAENSRSERG RKVALANIPT PENGTPSHV
Arabidopsis Description
NRT2.3High affinity nitrate transporter 2.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJH7]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.