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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70994 Canola golgi, plasma membrane 94.33 94.33
VIT_06s0061g00310.t01 Wine grape plasma membrane 53.26 75.5
CDY68730 Canola endoplasmic reticulum, plasma membrane 81.59 73.28
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 52.41 68.01
CDY31024 Canola endoplasmic reticulum, plasma membrane 29.18 66.88
Bra030713.1-P Field mustard golgi, peroxisome, plasma membrane 99.43 66.23
CDY26984 Canola plasma membrane 81.3 62.94
CDY32821 Canola cytosol, peroxisome, plasma membrane 81.02 61.64
CDY06299 Canola golgi, peroxisome, plasma membrane 88.1 61.46
CDY53125 Canola plastid 31.73 60.87
CDY22703 Canola golgi, peroxisome, plasma membrane 85.84 60.36
CDX93592 Canola golgi, peroxisome, plasma membrane 77.62 59.57
CDX93591 Canola golgi, peroxisome, plasma membrane 78.19 59.48
HORVU6Hr1G005720.1 Barley extracellular 63.46 59.1
CDY22704 Canola cytosol, peroxisome, plasma membrane 76.2 58.1
CDY06298 Canola golgi, peroxisome, plasma membrane 65.44 54.87
KRH26509 Soybean peroxisome 79.04 52.64
KRH22855 Soybean peroxisome 78.75 52.45
KRH30604 Soybean peroxisome 78.47 52.26
VIT_06s0061g00320.t01 Wine grape peroxisome 78.19 52.08
GSMUA_Achr11P... Banana cytosol 70.82 51.87
CDY31023 Canola endoplasmic reticulum, extracellular 11.9 50.0
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 70.54 49.6
TraesCS6B01G044500.1 Wheat plastid 67.71 49.28
CDY69111 Canola peroxisome 66.57 48.96
CDY50324 Canola plasma membrane 65.72 48.33
HORVU6Hr1G005590.1 Barley plasma membrane 69.12 48.13
TraesCS6A01G031000.1 Wheat plasma membrane 68.84 47.93
TraesCS6A01G031100.1 Wheat plastid 68.56 47.73
TraesCS6A01G030900.1 Wheat plasma membrane 68.56 47.73
TraesCS6B01G044300.1 Wheat plasma membrane 68.56 47.73
TraesCS6D01G035900.1 Wheat plasma membrane 68.56 47.73
TraesCS6B01G044100.1 Wheat plastid 68.56 47.73
TraesCS6B01G044200.1 Wheat plasma membrane 68.56 47.73
TraesCS6D01G035800.1 Wheat plasma membrane 68.27 47.53
TraesCS6A01G030700.1 Wheat plastid 68.27 47.53
TraesCS6A01G030800.1 Wheat plasma membrane 68.27 47.53
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 62.04 47.51
TraesCS6D01G035700.1 Wheat plasma membrane 67.99 47.34
TraesCS6B01G044000.1 Wheat plasma membrane 67.71 46.95
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 67.71 46.95
Os02t0112100-01 Rice golgi, plasma membrane, plastid 70.82 46.9
Os02t0112600-01 Rice golgi, plasma membrane, plastid 70.82 46.9
TraesCS6D01G035600.1 Wheat plasma membrane 67.42 46.76
CDX99169 Canola cytosol 9.92 46.67
TraesCS6A01G031200.1 Wheat plasma membrane 67.14 46.56
Zm00001d054060_P001 Maize plastid 67.99 45.8
Zm00001d054057_P001 Maize extracellular 67.99 45.8
EES04351 Sorghum golgi, peroxisome, plasma membrane 68.27 45.73
EES06135 Sorghum golgi, peroxisome, plasma membrane 68.27 45.73
HORVU6Hr1G005580.1 Barley plastid 68.84 44.59
TraesCS6D01G037800.1 Wheat plasma membrane 63.74 44.38
TraesCS6A01G032400.1 Wheat plastid 63.46 44.09
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 63.46 44.09
TraesCS6B01G045700.1 Wheat plastid 63.17 44.07
TraesCS6B01G046600.1 Wheat plasma membrane 63.46 44.01
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 63.17 43.9
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 63.17 43.9
TraesCS6A01G032500.1 Wheat plastid 63.17 43.9
TraesCS6B01G046500.1 Wheat plasma membrane 62.61 43.59
TraesCS2A01G074800.1 Wheat plasma membrane 61.76 43.43
TraesCS6D01G038200.1 Wheat plasma membrane 62.32 43.31
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 62.32 43.22
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 62.32 43.22
TraesCS6A01G032800.1 Wheat plasma membrane 62.04 43.2
TraesCS6A01G033100.1 Wheat plasma membrane 62.04 43.11
TraesCS6D01G038300.1 Wheat plasma membrane 62.04 43.11
TraesCS6B01G046700.1 Wheat plasma membrane 62.04 43.11
TraesCS2D01G073500.1 Wheat plasma membrane 60.91 43.09
TraesCS6A01G033000.1 Wheat plasma membrane 62.04 43.03
TraesCS6D01G037900.1 Wheat plasma membrane 62.04 43.03
HORVU6Hr1G005930.1 Barley plasma membrane 61.76 42.91
TraesCS6B01G044400.1 Wheat plastid 68.56 42.83
HORVU6Hr1G005770.1 Barley plasma membrane 61.76 42.83
TraesCS6D01G038000.1 Wheat plasma membrane 61.19 42.6
TraesCS6A01G033200.1 Wheat plasma membrane 61.19 42.52
Zm00001d014976_P001 Maize plasma membrane 61.76 41.76
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 52.69 41.7
EES04350 Sorghum plastid 62.89 41.5
CDY21075 Canola plasma membrane 56.94 40.28
CDY34599 Canola plasma membrane 56.37 39.96
CDX85593 Canola golgi, peroxisome, plasma membrane, plastid 39.94 29.13
CDX91044 Canola golgi, peroxisome, plasma membrane, plastid 39.66 27.89
HORVU6Hr1G005750.1 Barley cytosol, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY72274EnsemblPlantsGene:GSBRNA2T00026128001Gene3D:1.20.1250.20GO:A0A078K028GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sfPANTHER:PTHR23515PANTHER:PTHR23515:SF3
ProteinID:CDY72274ProteinID:CDY72274.1SEG:segSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EEFCAE
UniProt:A0A078K028MapMan:24.2.2.10MapMan:25.1.3.1:::
Description
BnaAnng40490DBnaAnng40490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K028]
Coordinates
chrLK049842:-:627..2104
Molecular Weight (calculated)
38544.9 Da
IEP (calculated)
9.302
GRAVY (calculated)
0.247
Length
353 amino acids
Sequence
(BLAST)
001: MFNSQIIGLV NGTAAGWGNM GGGITQLLMP VVYEIIRRCG ATAFTAWRLA FFVPGWLHII MGILVLTLGQ DLPDGNRSAL EKKGEVAKDK FGKIMWYAVT
101: NYRTWIFVLL YGYSMGVELS TDNVIAEYFF DRFHLKLHTA GIIAASFGMA NFFARPAGGY ASDIAATYFG MRGRLWALWI IQTAGGLFCV WLGRANTLVT
201: AIVAMILFSL GAQAACGATF AIVPVVSRRA LGIISGLTGA GGNFGSGLTQ LIFFSTSQFT TEQGLTWMGV MIVACTLPVT LIHFPQWGSM FLPPSKDPVK
301: GTEEHYYASE WNEQEKQKNM HQGSLRFAEN SKSEGGRRVR SAATPPENTP NNV
Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.