CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72274	Canola	plasma membrane	66.88	29.18
CDY70994	Canola	golgi, plasma membrane	64.94	28.33
CDY68730	Canola	endoplasmic reticulum, plasma membrane	70.13	27.48
HORVU6Hr1G005720.1	Barley	extracellular	62.99	25.59
CDY53125	Canola	plastid	29.87	25.0
Bra038301.1-P	Field mustard	golgi, peroxisome, plasma membrane	87.66	24.86
CDY06298	Canola	golgi, peroxisome, plasma membrane	64.94	23.75
CDY26984	Canola	plasma membrane	70.13	23.68
CDY50324	Canola	plasma membrane	70.13	22.5
CDY69111	Canola	peroxisome	69.48	22.29
GSMUA_Achr11P...	Banana	cytosol	66.88	21.37
HORVU6Hr1G005570.1	Barley	golgi, plasma membrane	37.66	21.32
KRH26509	Soybean	peroxisome	72.08	20.94
VIT_06s0061g00310.t01	Wine grape	plasma membrane	33.77	20.88
HORVU6Hr1G005780.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	62.34	20.82
KRH22855	Soybean	peroxisome	71.43	20.75
CDY22703	Canola	golgi, peroxisome, plasma membrane	66.23	20.32
KRH30604	Soybean	peroxisome	69.48	20.19
CDY06299	Canola	golgi, peroxisome, plasma membrane	66.23	20.16
GSMUA_Achr8P14230_001	Banana	golgi, peroxisome, plasma membrane	65.58	20.12
Solyc06g010250.2.1	Tomato	plasma membrane	64.29	19.88
Solyc11g069750.1.1	Tomato	extracellular	66.88	19.62
PGSC0003DMT400050654	Potato	plasma membrane	66.88	19.62
VIT_06s0061g00320.t01	Wine grape	peroxisome	66.88	19.43
TraesCS6B01G044500.1	Wheat	plastid	61.04	19.38
TraesCS6B01G046600.1	Wheat	plasma membrane	63.64	19.25
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	62.99	19.09
TraesCS6A01G032400.1	Wheat	plastid	62.99	19.09
TraesCS6A01G032900.1	Wheat	golgi, plasma membrane, vacuole	62.99	19.06
TraesCS6B01G045700.1	Wheat	plastid	62.34	18.97
TraesCS6B01G044200.1	Wheat	plasma membrane	62.34	18.93
HORVU6Hr1G005590.1	Barley	plasma membrane	62.34	18.93
TraesCS6B01G046500.1	Wheat	plasma membrane	62.34	18.93
TraesCS6D01G037800.1	Wheat	plasma membrane	62.34	18.93
TraesCS6A01G033100.1	Wheat	plasma membrane	62.34	18.9
TraesCS6B01G045600.1	Wheat	golgi, plasma membrane, vacuole	62.34	18.9
TraesCS6A01G032500.1	Wheat	plastid	62.34	18.9
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	62.34	18.9
TraesCS6D01G035600.1	Wheat	plasma membrane	62.34	18.86
TraesCS6A01G031200.1	Wheat	plasma membrane	62.34	18.86
TraesCS6B01G044300.1	Wheat	plasma membrane	61.69	18.74
TraesCS6B01G044100.1	Wheat	plastid	61.69	18.74
TraesCS6A01G031100.1	Wheat	plastid	61.69	18.74
TraesCS6A01G031000.1	Wheat	plasma membrane	61.69	18.74
TraesCS6A01G030900.1	Wheat	plasma membrane	61.69	18.74
TraesCS6A01G030800.1	Wheat	plasma membrane	61.69	18.74
TraesCS6A01G030700.1	Wheat	plastid	61.69	18.74
TraesCS6D01G035800.1	Wheat	plasma membrane	61.69	18.74
TraesCS6D01G035700.1	Wheat	plasma membrane	61.69	18.74
TraesCS6D01G035900.1	Wheat	plasma membrane	61.69	18.74
TraesCS6D01G038000.1	Wheat	plasma membrane	61.69	18.74
PGSC0003DMT400040689	Potato	plasma membrane	63.64	18.7
TraesCS6D01G038300.1	Wheat	plasma membrane	61.69	18.7
HORVU6Hr1G005930.1	Barley	plasma membrane	61.69	18.7
TraesCS6D01G038200.1	Wheat	plasma membrane	61.69	18.7
TraesCS6D01G037900.1	Wheat	plasma membrane	61.69	18.66
TraesCS6A01G033000.1	Wheat	plasma membrane	61.69	18.66
HORVU6Hr1G005600.2	Barley	endoplasmic reticulum	61.69	18.66
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	61.69	18.66
EES04351	Sorghum	golgi, peroxisome, plasma membrane	63.64	18.6
EES06135	Sorghum	golgi, peroxisome, plasma membrane	63.64	18.6
TraesCS6B01G046700.1	Wheat	plasma membrane	61.04	18.5
TraesCS6A01G033200.1	Wheat	plasma membrane	61.04	18.5
TraesCS6B01G044000.1	Wheat	plasma membrane	61.04	18.47
HORVU6Hr1G005770.1	Barley	plasma membrane	61.04	18.47
Os02t0112600-01	Rice	golgi, plasma membrane, plastid	63.64	18.39
Os02t0112100-01	Rice	golgi, plasma membrane, plastid	63.64	18.39
KRH25078	Soybean	peroxisome, plasma membrane, plastid, vacuole	53.25	18.39
TraesCS6A01G032800.1	Wheat	plasma membrane	60.39	18.34
TraesCS2D01G073500.1	Wheat	plasma membrane	59.09	18.24
Zm00001d054057_P001	Maize	extracellular	61.69	18.13
Zm00001d054060_P001	Maize	plastid	61.69	18.13
TraesCS2A01G074800.1	Wheat	plasma membrane	58.44	17.93
HORVU6Hr1G005580.1	Barley	plastid	62.34	17.61
CDY34599	Canola	plasma membrane	55.84	17.27
CDY21075	Canola	plasma membrane	55.84	17.23
CDX93592	Canola	golgi, peroxisome, plasma membrane	51.3	17.17
CDX93591	Canola	golgi, peroxisome, plasma membrane	51.3	17.03
CDY32821	Canola	cytosol, peroxisome, plasma membrane	51.3	17.03
TraesCS6B01G044400.1	Wheat	plastid	61.69	16.81
CDY22704	Canola	cytosol, peroxisome, plasma membrane	50.0	16.63
EES04350	Sorghum	plastid	57.14	16.45
Zm00001d014976_P001	Maize	plasma membrane	54.55	16.09
CDX85593	Canola	golgi, peroxisome, plasma membrane, plastid	37.66	11.98
CDX91044	Canola	golgi, peroxisome, plasma membrane, plastid	37.66	11.55
AT4G14358.1	Thale cress	cytosol	2.6	4.6
CDX99169	Canola	cytosol	0.0	0.0
HORVU6Hr1G005750.1	Barley	cytosol, plastid	0.0	0.0
CDY31023	Canola	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:CDY31024	EnsemblPlantsGene:GSBRNA2T00047076001	Gene3D:1.20.1250.20	GO:A0A078H0W6	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:MFS_trans_sf	ncoils:Coil	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	ProteinID:CDY31024
ProteinID:CDY31024.1	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004EEC1B6	UniProt:A0A078H0W6	MapMan:35.1

Description

BnaC03g55110DBnaC03g55110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0W6]

Coordinates

chrLK032266:-:209462..210570

Molecular Weight (calculated)

17092.4 Da

IEP (calculated)

10.547

GRAVY (calculated)

0.556

Length

154 amino acids

Sequence
(BLAST)

001: MPMVFHVIKV AGATPFTAWR IAFFVPGFLQ VIMGILVLTL GQDLPDGNLC TLQKKGDVSK DKLTKVLKEA KMTINNVISE YLFDRFQIKL HLHTAGMIAA
101: SFGMANFFAR PIGGFASDVS ARFFGMRGRL WTLWILQTSG GLFCVFSAVT LHFL

Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)

001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV

Arabidopsis Description

NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.