Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21075 | Canola | plasma membrane | 99.0 | 98.8 |
| AT1G12940.1 | Thale cress | plasma membrane | 90.96 | 90.24 |
| VIT_01s0127g00070.t01 | Wine grape | plasma membrane | 73.9 | 72.87 |
| KRH45628 | Soybean | plasma membrane | 73.9 | 72.44 |
| KRG99396 | Soybean | plasma membrane | 73.9 | 72.16 |
| Bra016747.1-P | Field mustard | plasma membrane | 82.93 | 71.83 |
| PGSC0003DMT400043794 | Potato | plasma membrane | 71.69 | 71.4 |
| GSMUA_Achr4P06400_001 | Banana | plasma membrane | 64.66 | 70.0 |
| GSMUA_Achr4P13270_001 | Banana | plasma membrane | 62.05 | 67.32 |
| EES01339 | Sorghum | plasma membrane | 66.87 | 64.66 |
| TraesCS3D01G254900.1 | Wheat | plasma membrane | 66.67 | 64.59 |
| TraesCS3B01G285900.1 | Wheat | plasma membrane | 66.47 | 64.4 |
| TraesCS3A01G254000.1 | Wheat | plasma membrane | 66.06 | 64.01 |
| Os01t0704100-02 | Rice | plasma membrane | 66.06 | 63.76 |
| Zm00001d011679_P001 | Maize | plasma membrane | 66.47 | 63.65 |
| HORVU3Hr1G066090.1 | Barley | plasma membrane | 65.46 | 63.42 |
| TraesCSU01G002800.1 | Wheat | plasma membrane | 64.26 | 62.14 |
| TraesCS1D01G035700.1 | Wheat | plasma membrane | 63.45 | 61.0 |
| CDY22703 | Canola | golgi, peroxisome, plasma membrane | 58.23 | 57.77 |
| CDY06298 | Canola | golgi, peroxisome, plasma membrane | 48.59 | 57.48 |
| CDY06299 | Canola | golgi, peroxisome, plasma membrane | 58.03 | 57.11 |
| CDY72274 | Canola | plasma membrane | 39.96 | 56.37 |
| CDX93591 | Canola | golgi, peroxisome, plasma membrane | 52.41 | 56.25 |
| CDY68730 | Canola | endoplasmic reticulum, plasma membrane | 44.38 | 56.23 |
| CDY22704 | Canola | cytosol, peroxisome, plasma membrane | 52.01 | 55.94 |
| CDY31024 | Canola | endoplasmic reticulum, plasma membrane | 17.27 | 55.84 |
| CDY70994 | Canola | golgi, plasma membrane | 39.56 | 55.81 |
| CDX93592 | Canola | golgi, peroxisome, plasma membrane | 51.41 | 55.65 |
| CDY32821 | Canola | cytosol, peroxisome, plasma membrane | 51.61 | 55.39 |
| CDY50324 | Canola | plasma membrane | 50.4 | 52.29 |
| CDY69111 | Canola | peroxisome | 50.2 | 52.08 |
| CDY26984 | Canola | plasma membrane | 45.98 | 50.22 |
| CDY53125 | Canola | plastid | 18.47 | 50.0 |
| CDX85593 | Canola | golgi, peroxisome, plasma membrane, plastid | 48.59 | 50.0 |
| CDX91044 | Canola | golgi, peroxisome, plasma membrane, plastid | 48.39 | 48.01 |
| CDY31023 | Canola | endoplasmic reticulum, extracellular | 7.23 | 42.86 |
| CDX99169 | Canola | cytosol | 5.82 | 38.67 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.10 | MapMan:25.1.3.1 | GO:A0A078HAV7 | UniProt:A0A078HAV7 | EnsemblPlants:CDY34599 |
| ProteinID:CDY34599 | ProteinID:CDY34599.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00057044001 | InterPro:IPR020846 | InterPro:MFS | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | PFAM:PF07690 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | SUPFAM:SSF103473 | TMHMM:TMhelix |
| UniParc:UPI0004EBECE1 | SEG:seg | : | : | : | : |
Description
BnaC03g56990DBnaC03g56990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAV7]
Coordinates
chrLK032337:-:382286..384081
Molecular Weight (calculated)
54131.7 Da
IEP (calculated)
9.074
GRAVY (calculated)
0.342
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVEGKGEES RTTTTRRFAL PVDSENKSTT FRLFSVAKPH MRAFHLSWFQ FFCCFVSTFA APPLLPVIRE NLNLTATDIG NAGIASVSGS VFARLVMGTA
101: CDLFGPRLAS AALTLSTAPA VYFTSGIKSP IGFIMVRFFA GFSLATFVST QFWMSSMFSG PVVGSANGIA AGWGNLGGGA TQLIMPLVFS VIRQMGATKF
201: TAWRIAFFIP GLFQTFSAFA VLLFGQDLPD GDYWAMHKSG EKEKDEVGKV ITHGIRNYRG WITALAYGYC FGVELTIDNI IAEYFFDRFH LNLNTAGIIA
301: ASFGLANFFA RPGGGILSDL MARRFGMRGR LWSWWIIQTL GGVLCASLGQ IDSLTGSIVV MLIFSVFVQA SCGLTFGVVP FISRRSLGVI SGMTGAGGNV
401: GAVLTQLIFF KGSTYSRETG ITLMGIMSIA CSLPICLIYF PQWGGMFCGP SSKKVTEEEY YLAEWSTKEK EKNLHLASQK FAENSVSERG RATTHPQS
101: CDLFGPRLAS AALTLSTAPA VYFTSGIKSP IGFIMVRFFA GFSLATFVST QFWMSSMFSG PVVGSANGIA AGWGNLGGGA TQLIMPLVFS VIRQMGATKF
201: TAWRIAFFIP GLFQTFSAFA VLLFGQDLPD GDYWAMHKSG EKEKDEVGKV ITHGIRNYRG WITALAYGYC FGVELTIDNI IAEYFFDRFH LNLNTAGIIA
301: ASFGLANFFA RPGGGILSDL MARRFGMRGR LWSWWIIQTL GGVLCASLGQ IDSLTGSIVV MLIFSVFVQA SCGLTFGVVP FISRRSLGVI SGMTGAGGNV
401: GAVLTQLIFF KGSTYSRETG ITLMGIMSIA CSLPICLIYF PQWGGMFCGP SSKKVTEEEY YLAEWSTKEK EKNLHLASQK FAENSVSERG RATTHPQS
001: MEVEGKGGEA GTTTTTAPRR FALPVDAENK ATTFRLFSVA KPHMRAFHLS WFQFFCCFVS TFAAPPLLPV IRENLNLTAT DIGNAGIASV SGAVFARIVM
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
101: GTACDLFGPR LASAALTLST APAVYFTAGI KSPIGFIMVR FFAGFSLATF VSTQFWMSSM FSGPVVGSAN GIAAGWGNLG GGATQLIMPI VFSLIRNMGA
201: TKFTAWRIAF FIPGLFQTLS AFAVLLFGQD LPDGDYWAMH KSGEREKDDV GKVISNGIKN YRGWITALAY GYCFGVELTI DNIIAEYFFD RFHLKLQTAG
301: IIAASFGLAN FFARPGGGIF SDFMSRRFGM RGRLWAWWIV QTSGGVLCAC LGQISSLTVS IIVMLVFSVF VQAACGLTFG VVPFISRRSL GVVSGMTGAG
401: GNVGAVLTQL IFFKGSTYTR ETGITLMGVM SIACSLPICL IYFPQWGGMF CGPSSKKVTE EDYYLAEWND EEKEKNLHIG SQKFAETSIS ERGRATTTHP
501: QT
Arabidopsis Description
NRT2.5High affinity nitrate transporter 2.5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.