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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:endoplasmic reticulum, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99169 Canola cytosol 21.74 53.33
CDY31023 Canola endoplasmic reticulum, extracellular 21.74 47.62
VIT_06s0061g00310.t01 Wine grape plasma membrane 63.04 46.59
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 55.98 37.87
CDY72274 Canola plasma membrane 60.87 31.73
CDY70994 Canola golgi, plasma membrane 59.78 31.16
CDY31024 Canola endoplasmic reticulum, plasma membrane 25.0 29.87
CDY68730 Canola endoplasmic reticulum, plasma membrane 61.96 29.01
HORVU6Hr1G005720.1 Barley extracellular 54.89 26.65
CDY50324 Canola plasma membrane 66.3 25.42
CDY69111 Canola peroxisome 65.22 25.0
CDY26984 Canola plasma membrane 61.96 25.0
KRH22855 Soybean peroxisome 64.13 22.26
KRH26509 Soybean peroxisome 63.59 22.08
KRH30604 Soybean peroxisome 63.59 22.08
VIT_06s0061g00320.t01 Wine grape peroxisome 63.59 22.08
GSMUA_Achr11P... Banana cytosol 57.07 21.78
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 54.35 21.69
CDY06299 Canola golgi, peroxisome, plasma membrane 59.24 21.54
CDY22703 Canola golgi, peroxisome, plasma membrane 58.7 21.51
PGSC0003DMT400050654 Potato plasma membrane 60.33 21.14
Solyc11g069750.1.1 Tomato extracellular 60.33 21.14
Solyc06g010250.2.1 Tomato plasma membrane 57.07 21.08
TraesCS6D01G035600.1 Wheat plasma membrane 57.61 20.83
TraesCS6B01G044500.1 Wheat plastid 54.35 20.62
HORVU6Hr1G005590.1 Barley plasma membrane 56.52 20.51
TraesCS6B01G044000.1 Wheat plasma membrane 56.52 20.43
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 56.52 20.43
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 55.43 20.32
TraesCS6A01G031100.1 Wheat plastid 55.98 20.32
TraesCS6D01G035900.1 Wheat plasma membrane 55.98 20.32
TraesCS6D01G035700.1 Wheat plasma membrane 55.98 20.32
TraesCS6A01G031000.1 Wheat plasma membrane 55.98 20.32
TraesCS6A01G030900.1 Wheat plasma membrane 55.98 20.32
TraesCS6D01G035800.1 Wheat plasma membrane 55.98 20.32
TraesCS6B01G044300.1 Wheat plasma membrane 55.98 20.32
TraesCS6B01G044200.1 Wheat plasma membrane 55.98 20.32
TraesCS6D01G037800.1 Wheat plasma membrane 55.98 20.32
TraesCS6B01G044100.1 Wheat plastid 55.98 20.32
TraesCS6A01G030800.1 Wheat plasma membrane 55.43 20.12
TraesCS6A01G030700.1 Wheat plastid 55.43 20.12
PGSC0003DMT400040689 Potato plasma membrane 57.07 20.04
TraesCS6B01G046500.1 Wheat plasma membrane 54.89 19.92
TraesCS6A01G032800.1 Wheat plasma membrane 54.89 19.92
TraesCS6A01G032400.1 Wheat plastid 54.89 19.88
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 54.89 19.88
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 54.89 19.88
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 54.89 19.88
TraesCS6A01G031200.1 Wheat plasma membrane 54.89 19.84
TraesCS6B01G046600.1 Wheat plasma membrane 54.89 19.84
CDY32821 Canola cytosol, peroxisome, plasma membrane 50.0 19.83
TraesCS6B01G045700.1 Wheat plastid 54.35 19.76
TraesCS6A01G032500.1 Wheat plastid 54.35 19.68
HORVU6Hr1G005930.1 Barley plasma membrane 54.35 19.68
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 54.35 19.65
TraesCS6A01G033000.1 Wheat plasma membrane 54.35 19.65
HORVU6Hr1G005770.1 Barley plasma membrane 54.35 19.65
CDX93591 Canola golgi, peroxisome, plasma membrane 49.46 19.61
EES06135 Sorghum golgi, peroxisome, plasma membrane 55.98 19.54
EES04351 Sorghum golgi, peroxisome, plasma membrane 55.98 19.54
TraesCS6D01G038200.1 Wheat plasma membrane 53.8 19.49
TraesCS6D01G037900.1 Wheat plasma membrane 53.8 19.45
TraesCS6A01G033200.1 Wheat plasma membrane 53.26 19.29
TraesCS6D01G038300.1 Wheat plasma membrane 53.26 19.29
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 53.26 19.25
Os02t0112600-01 Rice golgi, plasma membrane, plastid 55.43 19.14
Os02t0112100-01 Rice golgi, plasma membrane, plastid 55.43 19.14
TraesCS6B01G046700.1 Wheat plasma membrane 52.72 19.09
TraesCS6A01G033100.1 Wheat plasma membrane 52.72 19.09
Zm00001d054057_P001 Maize extracellular 54.35 19.08
Zm00001d054060_P001 Maize plastid 54.35 19.08
HORVU6Hr1G005580.1 Barley plastid 56.52 19.08
EES04350 Sorghum plastid 55.43 19.07
CDY22704 Canola cytosol, peroxisome, plasma membrane 47.83 19.01
TraesCS6D01G038000.1 Wheat plasma membrane 52.17 18.93
CDX93592 Canola golgi, peroxisome, plasma membrane 46.74 18.7
CDY34599 Canola plasma membrane 50.0 18.47
TraesCS2D01G073500.1 Wheat plasma membrane 50.0 18.44
CDY21075 Canola plasma membrane 50.0 18.44
Zm00001d014976_P001 Maize plasma membrane 52.17 18.39
TraesCS2A01G074800.1 Wheat plasma membrane 50.0 18.33
TraesCS6B01G044400.1 Wheat plastid 55.98 18.23
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 44.02 18.16
CDY06298 Canola golgi, peroxisome, plasma membrane 38.59 16.86
CDX85593 Canola golgi, peroxisome, plasma membrane, plastid 33.7 12.81
CDX91044 Canola golgi, peroxisome, plasma membrane, plastid 33.15 12.15
AT4G14358.1 Thale cress cytosol 0.54 1.15
HORVU6Hr1G005750.1 Barley cytosol, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY53125EnsemblPlantsGene:GSBRNA2T00008641001Gene3D:1.20.1250.20GO:A0A078IPX1GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:MFS_trans_sfPANTHER:PTHR23515PANTHER:PTHR23515:SF3ProteinID:CDY53125ProteinID:CDY53125.1
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE8D30UniProt:A0A078IPX1MapMan:35.1:
Description
BnaC03g74700DBnaC03g74700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPX1]
Coordinates
chrLK033167:+:33502..34153
Molecular Weight (calculated)
19866.1 Da
IEP (calculated)
10.370
GRAVY (calculated)
0.259
Length
184 amino acids
Sequence
(BLAST)
001: MIAASFGMAN FFARPIGGYA YNVSARFFGM RGRLWTLWIL QTSGALFCVW LGRATSLSVA ILAMMLFSIG VQAACGAIFG IVPFVSHRSL GIILGLTGAG
101: RNFGSGLTQL IFFSSPRFHI ADVTKNNQRK SIIYYEAEWT AEEKLQGLHE GSLKFAENSI SERGRKAALD GASTSPGNGN RADV
Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.