Factsheet for Os02t0112600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0595900-01
Os04t0480200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G08090.1	Os02t0595900-01	AT5G50200.1	17012411
AT1G08090.1	Os04t0480200-01	AT5G50200.1	17012411
AT5G60780.1	Os02t0595900-01	AT5G50200.1	17012411
AT5G60780.1	Os04t0480200-01	AT5G50200.1	17012411

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0112100-01	Rice	golgi, plasma membrane, plastid	100.0	100.0
Zm00001d054060_P001	Maize	plastid	87.24	88.74
Zm00001d054057_P001	Maize	extracellular	87.05	88.55
EES04351	Sorghum	golgi, peroxisome, plasma membrane	86.49	87.48
EES06135	Sorghum	golgi, peroxisome, plasma membrane	86.3	87.29
TraesCS6A01G030700.1	Wheat	plastid	80.49	84.62
TraesCS6A01G031200.1	Wheat	plasma membrane	80.68	84.48
TraesCS6D01G035600.1	Wheat	plasma membrane	80.68	84.48
TraesCS6D01G035900.1	Wheat	plasma membrane	80.3	84.42
TraesCS6A01G030900.1	Wheat	plasma membrane	80.11	84.22
HORVU6Hr1G005590.1	Barley	plasma membrane	79.92	84.02
TraesCS6A01G031100.1	Wheat	plastid	79.92	84.02
TraesCS6B01G044200.1	Wheat	plasma membrane	79.92	84.02
TraesCS6B01G044300.1	Wheat	plasma membrane	79.92	84.02
TraesCS6A01G030800.1	Wheat	plasma membrane	79.74	83.83
TraesCS6A01G031000.1	Wheat	plasma membrane	79.74	83.83
TraesCS6B01G044100.1	Wheat	plastid	79.74	83.83
TraesCS6D01G035700.1	Wheat	plasma membrane	79.74	83.83
TraesCS6D01G035800.1	Wheat	plasma membrane	79.74	83.83
TraesCS6B01G044000.1	Wheat	plasma membrane	79.92	83.69
HORVU6Hr1G005570.1	Barley	golgi, plasma membrane	42.21	82.72
HORVU6Hr1G005600.2	Barley	endoplasmic reticulum	77.3	80.94
HORVU6Hr1G005780.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	69.42	80.26
TraesCS6B01G046500.1	Wheat	plasma membrane	75.05	78.9
TraesCS6D01G037800.1	Wheat	plasma membrane	74.86	78.7
HORVU6Hr1G005720.1	Barley	extracellular	55.72	78.36
HORVU6Hr1G005580.1	Barley	plastid	80.11	78.35
TraesCS6A01G032800.1	Wheat	plasma membrane	74.3	78.11
TraesCS6A01G032400.1	Wheat	plastid	74.3	77.95
TraesCS6A01G032500.1	Wheat	plastid	74.3	77.95
TraesCS6B01G045700.1	Wheat	plastid	73.92	77.87
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	74.11	77.76
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	73.92	77.56
TraesCS6A01G033000.1	Wheat	plasma membrane	73.92	77.41
TraesCS6B01G045600.1	Wheat	golgi, plasma membrane, vacuole	73.73	77.36
TraesCS6D01G038200.1	Wheat	plasma membrane	73.73	77.36
TraesCS6B01G046600.1	Wheat	plasma membrane	73.73	77.21
HORVU6Hr1G005930.1	Barley	plasma membrane	73.55	77.17
TraesCS6A01G033100.1	Wheat	plasma membrane	73.55	77.17
TraesCS6D01G038300.1	Wheat	plasma membrane	73.55	77.17
TraesCS6A01G032900.1	Wheat	golgi, plasma membrane, vacuole	73.55	77.01
GSMUA_Achr8P14230_001	Banana	golgi, peroxisome, plasma membrane	72.42	76.89
HORVU6Hr1G005770.1	Barley	plasma membrane	73.36	76.82
TraesCS6D01G037900.1	Wheat	plasma membrane	73.36	76.82
TraesCS6B01G046700.1	Wheat	plasma membrane	73.17	76.77
PGSC0003DMT400050658	Potato	plasma membrane	62.48	76.73
TraesCS6B01G044500.1	Wheat	plastid	69.79	76.7
KRH22855	Soybean	peroxisome	76.17	76.6
TraesCS6A01G033200.1	Wheat	plasma membrane	72.98	76.57
KRH26509	Soybean	peroxisome	75.61	76.04
KRH30604	Soybean	peroxisome	75.61	76.04
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	72.61	76.03
GSMUA_Achr11P...	Banana	cytosol	68.67	75.93
TraesCS6B01G044400.1	Wheat	plastid	80.3	75.75
VIT_06s0061g00320.t01	Wine grape	peroxisome	75.05	75.47
TraesCS6D01G038000.1	Wheat	plasma membrane	71.67	75.35
HORVU6Hr1G005750.1	Barley	cytosol, plastid	14.26	75.25
CDY06298	Canola	golgi, peroxisome, plasma membrane	59.1	74.82
TraesCS2A01G074800.1	Wheat	plasma membrane	70.36	74.7
PGSC0003DMT400002924	Potato	plasma membrane	74.11	74.53
TraesCS2D01G073500.1	Wheat	plasma membrane	69.61	74.35
VIT_08s0040g01500.t01	Wine grape	golgi, peroxisome, plasma membrane, plastid	73.92	74.2
PGSC0003DMT400031304	Potato	plasma membrane	72.98	73.4
CDY22704	Canola	cytosol, peroxisome, plasma membrane	63.6	73.22
CDY32821	Canola	cytosol, peroxisome, plasma membrane	63.6	73.06
PGSC0003DMT400092589	Potato	plasma membrane	72.98	72.85
PGSC0003DMT400031306	Potato	plasma membrane	48.22	72.8
Bra031610.1-P	Field mustard	golgi, peroxisome, plasma membrane	72.23	72.78
Bra018656.1-P	Field mustard	golgi, peroxisome, plasma membrane	66.23	72.48
Bra030713.1-P	Field mustard	golgi, peroxisome, plasma membrane	72.05	72.45
CDX93591	Canola	golgi, peroxisome, plasma membrane	63.04	72.41
CDX93592	Canola	golgi, peroxisome, plasma membrane	62.48	72.39
AT5G60770.1	Thale cress	plasma membrane	71.48	72.3
AT1G08090.1	Thale cress	cytosol, peroxisome, plasma membrane	71.48	71.89
CDY70994	Canola	golgi, plasma membrane	47.47	71.67
Bra002453.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	70.73	71.54
Bra018655.1-P	Field mustard	golgi, peroxisome, plasma membrane	66.98	71.26
CDY72274	Canola	plasma membrane	46.9	70.82
CDY22703	Canola	golgi, peroxisome, plasma membrane	66.42	70.52
Solyc11g069760.1.1	Tomato	extracellular, plasma membrane	24.2	70.49
CDY68730	Canola	endoplasmic reticulum, plasma membrane	51.97	70.48
VIT_06s0061g00310.t01	Wine grape	plasma membrane	32.83	70.28
Bra031611.1-P	Field mustard	golgi, peroxisome, plasma membrane	65.85	69.37
CDY06299	Canola	golgi, peroxisome, plasma membrane	65.85	69.37
AT1G08100.1	Thale cress	cytosol, peroxisome, plasma membrane	66.98	68.39
PGSC0003DMT400050654	Potato	plasma membrane	67.17	68.19
Solyc11g069750.1.1	Tomato	extracellular	66.79	67.81
KRH25078	Soybean	peroxisome, plasma membrane, plastid, vacuole	56.66	67.71
Bra034142.1-P	Field mustard	plasma membrane	19.51	67.53
Solyc06g074990.1.1	Tomato	plasma membrane	66.04	66.92
Solyc06g010250.2.1	Tomato	plasma membrane	62.48	66.87
AT5G60780.1	Thale cress	peroxisome	66.98	66.23
AT3G45060.1	Thale cress	peroxisome	67.17	66.05
Bra037625.1-P	Field mustard	peroxisome	66.98	65.99
Bra038302.1-P	Field mustard	peroxisome	66.04	65.43
CDY50324	Canola	plasma membrane	58.91	65.42
Bra002451.1-P	Field mustard	golgi, peroxisome, plasma membrane	65.67	65.3
PGSC0003DMT400040689	Potato	plasma membrane	64.17	65.27
Bra020230.1-P	Field mustard	peroxisome	59.66	65.16
CDY69111	Canola	peroxisome	58.54	65.0
Bra037626.1-P	Field mustard	peroxisome	65.48	63.92
CDY31024	Canola	endoplasmic reticulum, plasma membrane	18.39	63.64
Bra038301.1-P	Field mustard	golgi, peroxisome, plasma membrane	64.73	63.54
CDY26984	Canola	plasma membrane	54.22	63.38
Os01t0704100-02	Rice	plasma membrane	54.6	56.4
CDY53125	Canola	plastid	19.14	55.43
CDY31023	Canola	endoplasmic reticulum, extracellular	8.07	51.19
CDX99169	Canola	cytosol	7.13	50.67
AT4G14358.1	Thale cress	cytosol	7.13	43.68
Solyc11g069740.1.1	Tomato	cytosol, peroxisome	42.21	43.52
Os01t0547600-01	Rice	plasma membrane	36.4	40.0

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	EntrezGene:4328051	EntrezGene:4328052	EMBL:AB008519
EMBL:AK109733	ProteinID:BAD07627.1	ProteinID:BAD07629.1	ProteinID:BAD07851.1	ProteinID:BAD07853.1	ProteinID:BAF07572.1
ProteinID:BAF07573.1	ProteinID:BAS76625.1	ProteinID:BAS76626.1	ProteinID:EAZ21473.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009705
GO:GO:0009987	GO:GO:0015112	GO:GO:0015706	GO:GO:0016020	GO:GO:0016021	GO:GO:0042128
GO:GO:0055085	GO:GO:0071249	InterPro:IPR020846	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf
EnsemblPlantsGene:Os02g0112600	EnsemblPlants:Os02t0112600-01	UniProt:P0DKG9	UniProt:P0DKH0	PFAM:PF07690	PANTHER:PTHR23515
PANTHER:PTHR23515:SF3	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00000AA7FA	RefSeq:XP_015623596.1	RefSeq:XP_015623638.1
SEG:seg	:	:	:	:	:

Description

HIGH AFFINITY NITRATE TRANSPORTERHigh-affinity nitrate transporter, Nitrate uptake, Nitrate transport (Os02t0112600-01)

Coordinates

chr2:-:667264..669053

Molecular Weight (calculated)

57233.4 Da

IEP (calculated)

8.199

GRAVY (calculated)

0.369

Length

533 amino acids

Sequence
(BLAST)

001: MDSSTVGAPG SSLHGVTGRE PAFAFSTEVG GEDAAAASKF DLPVDSEHKA KTIRLLSFAN PHMRTFHLSW ISFFSCFVST FAAAPLVPII RDNLNLTKAD
101: IGNAGVASVS GSIFSRLAMG AICDMLGPRY GCAFLIMLAA PTVFCMSLID SAAGYIAVRF LIGFSLATFV SCQYWMSTMF NSKIIGLVNG LAAGWGNMGG
201: GATQLIMPLV YDVIRKCGAT PFTAWRLAYF VPGTLHVVMG VLVLTLGQDL PDGNLRSLQK KGDVNRDSFS RVLWYAVTNY RTWIFVLLYG YSMGVELTTD
301: NVIAEYFYDR FDLDLRVAGI IAASFGMANI VARPTGGLLS DLGARYFGMR ARLWNIWILQ TAGGAFCLLL GRASTLPTSV VCMVLFSFCA QAACGAIFGV
401: IPFVSRRSLG IISGMTGAGG NFGAGLTQLL FFTSSRYSTG TGLEYMGIMI MACTLPVVLV HFPQWGSMFL PPNAGAEEEH YYGSEWSEQE KSKGLHGASL
501: KFAENSRSER GRRNVINAAA AAATPPNNSP EHA

Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)

001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV

Arabidopsis Description

NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.