Factsheet for Bra037625.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034142.1-P	Field mustard	plasma membrane	28.28	99.35
AT3G45060.1	Thale cress	peroxisome	95.93	95.76
Bra038302.1-P	Field mustard	peroxisome	95.19	95.72
Bra020230.1-P	Field mustard	peroxisome	80.22	88.93
Bra002451.1-P	Field mustard	golgi, peroxisome, plasma membrane	87.06	87.87
Bra037626.1-P	Field mustard	peroxisome	82.99	82.23
Bra038301.1-P	Field mustard	golgi, peroxisome, plasma membrane	81.7	81.4
VIT_06s0061g00320.t01	Wine grape	peroxisome	73.2	74.72
KRH22855	Soybean	peroxisome	72.83	74.34
KRH26509	Soybean	peroxisome	72.64	74.15
KRH30604	Soybean	peroxisome	72.09	73.58
VIT_06s0061g00310.t01	Wine grape	plasma membrane	33.64	73.09
HORVU6Hr1G005750.1	Barley	cytosol, plastid	13.49	72.28
Solyc06g010250.2.1	Tomato	plasma membrane	66.17	71.89
Bra002453.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	69.5	71.35
PGSC0003DMT400050654	Potato	plasma membrane	68.76	70.86
PGSC0003DMT400040689	Potato	plasma membrane	68.58	70.8
Bra030713.1-P	Field mustard	golgi, peroxisome, plasma membrane	68.95	70.38
Solyc11g069750.1.1	Tomato	extracellular	68.21	70.29
Bra031610.1-P	Field mustard	golgi, peroxisome, plasma membrane	67.84	69.38
Bra018656.1-P	Field mustard	golgi, peroxisome, plasma membrane	62.29	69.2
GSMUA_Achr8P14230_001	Banana	golgi, peroxisome, plasma membrane	64.14	69.12
Bra031611.1-P	Field mustard	golgi, peroxisome, plasma membrane	64.33	68.77
Bra018655.1-P	Field mustard	golgi, peroxisome, plasma membrane	63.59	68.66
GSMUA_Achr11P...	Banana	cytosol	60.81	68.26
TraesCS6D01G035700.1	Wheat	plasma membrane	63.59	67.85
TraesCS6D01G035900.1	Wheat	plasma membrane	63.59	67.85
TraesCS6A01G030700.1	Wheat	plastid	63.4	67.65
TraesCS6A01G030800.1	Wheat	plasma membrane	63.4	67.65
TraesCS6A01G030900.1	Wheat	plasma membrane	63.4	67.65
TraesCS6A01G031100.1	Wheat	plastid	63.4	67.65
TraesCS6B01G044200.1	Wheat	plasma membrane	63.4	67.65
TraesCS6B01G044300.1	Wheat	plasma membrane	63.4	67.65
TraesCS6D01G035800.1	Wheat	plasma membrane	63.22	67.46
TraesCS6A01G031000.1	Wheat	plasma membrane	63.22	67.46
EES04351	Sorghum	golgi, peroxisome, plasma membrane	65.62	67.36
EES06135	Sorghum	golgi, peroxisome, plasma membrane	65.62	67.36
TraesCS6B01G044100.1	Wheat	plastid	63.03	67.26
HORVU6Hr1G005590.1	Barley	plasma membrane	63.03	67.26
Zm00001d054060_P001	Maize	plastid	65.06	67.18
Zm00001d054057_P001	Maize	extracellular	64.88	66.98
Os02t0112100-01	Rice	golgi, plasma membrane, plastid	65.99	66.98
Os02t0112600-01	Rice	golgi, plasma membrane, plastid	65.99	66.98
KRH25078	Soybean	peroxisome, plasma membrane, plastid, vacuole	55.08	66.82
TraesCS6A01G031200.1	Wheat	plasma membrane	62.29	66.21
TraesCS6B01G044000.1	Wheat	plasma membrane	62.11	66.01
TraesCS6D01G035600.1	Wheat	plasma membrane	62.11	66.01
TraesCS6A01G032400.1	Wheat	plastid	61.92	65.94
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	61.92	65.94
HORVU6Hr1G005780.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	56.19	65.94
TraesCS6B01G045600.1	Wheat	golgi, plasma membrane, vacuole	61.55	65.55
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	61.55	65.55
TraesCS6A01G032500.1	Wheat	plastid	61.55	65.55
TraesCS6D01G037800.1	Wheat	plasma membrane	61.37	65.48
HORVU6Hr1G005570.1	Barley	golgi, plasma membrane	32.9	65.44
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	61.55	65.42
TraesCS6B01G046600.1	Wheat	plasma membrane	61.55	65.42
TraesCS6D01G037900.1	Wheat	plasma membrane	61.37	65.23
TraesCS6B01G045700.1	Wheat	plastid	61.0	65.22
TraesCS6A01G033000.1	Wheat	plasma membrane	61.18	65.03
TraesCS6B01G046700.1	Wheat	plasma membrane	61.0	64.96
TraesCS6A01G032900.1	Wheat	golgi, plasma membrane, vacuole	61.0	64.83
TraesCS6D01G038200.1	Wheat	plasma membrane	60.81	64.76
HORVU6Hr1G005930.1	Barley	plasma membrane	60.81	64.76
TraesCS6B01G046500.1	Wheat	plasma membrane	60.63	64.69
TraesCS6D01G038000.1	Wheat	plasma membrane	60.63	64.69
TraesCS6A01G032800.1	Wheat	plasma membrane	60.63	64.69
HORVU6Hr1G005770.1	Barley	plasma membrane	60.81	64.64
TraesCS6A01G033200.1	Wheat	plasma membrane	60.63	64.57
TraesCS6D01G038300.1	Wheat	plasma membrane	60.44	64.37
TraesCS6A01G033100.1	Wheat	plasma membrane	60.44	64.37
HORVU6Hr1G005720.1	Barley	extracellular	44.73	63.85
EES04350	Sorghum	plastid	63.03	63.74
Zm00001d014976_P001	Maize	plasma membrane	61.37	63.6
HORVU6Hr1G005600.2	Barley	endoplasmic reticulum	59.52	63.26
HORVU6Hr1G005580.1	Barley	plastid	63.22	62.75
TraesCS2D01G073500.1	Wheat	plasma membrane	57.49	62.32
TraesCS2A01G074800.1	Wheat	plasma membrane	57.67	62.15
TraesCS6B01G044500.1	Wheat	plastid	55.27	61.65
TraesCS6B01G044400.1	Wheat	plastid	64.14	61.42
Bra023475.1-P	Field mustard	plastid	39.0	43.59
Bra016747.1-P	Field mustard	plasma membrane	43.99	41.39

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	EnsemblPlantsGene:Bra037625	EnsemblPlants:Bra037625.1	EnsemblPlants:Bra037625.1-P
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR020846	UniProt:M4F962	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690
PFscan:PS50850	PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000254399D
SEG:seg	:	:	:	:	:

Description

AT3G45060 (E=2e-296) ATNRT2.6, NRT2.6 | ATNRT2.6; nitrate transmembrane transporter

Coordinates

chrA01:-:13400836..13402559

Molecular Weight (calculated)

58464.0 Da

IEP (calculated)

8.716

GRAVY (calculated)

0.378

Length

541 amino acids

Sequence
(BLAST)

001: MAPNHSNENG SIGSSLHGVT AREQIFSFSV EDGPSSQAIR SDDPTAKFAL PVDSEHRAKV FKPLSFAKPH MRAFHLGWIS FFTCFISTFA AAPLVPVIRD
101: NLDLTKTDIG NAGVASVSGA IFSRLAMGAV CDLLGARYGT AFSLMLSAPA VFSMSFVADA GSYLAVRFMI GFCLATFVSC QYWTSVMFTG KIIGLVNGCA
201: GGWGDMGGGV TQLLMPMVFH VIKLTGATPF TAWRFAFFIP GFLQIIMGIL VLTLGQDLPD GNLSTLQKSG QVSKDKFSKV FWFAVKNYRT WILFVLYGFS
301: MGVELTINNV ISGYFYDRFN LTLHTAGIVA ASFGMANFFA RPFGGYASDV AARLFGMRGR LWTLWILQTV GALFCIWLGR ASSLPIAILA MMLFSVGTQA
401: ACGALFGVAP FVSRRSLGLI SGLTGAGGNF GSGVTQLLFF SSSRFSTAEG LSLMGVMAVV CTIPVAFIHF PQWGSMFLRP SQHEERSKEE HYYGGEWTEE
501: EKSLGLHEGS IKFAENSRSE RGRKAVLADI PTPETGSPAH V

Best Arabidopsis Sequence Match ( AT3G45060.1 )
(BLAST)

001: MAHNHSNEDG SIGTSLHGVT AREQVFSFSV QEDVPSSQAV RTNDPTAKFA LPVDSEHRAK VFKPLSFAKP HMRAFHLGWI SFFTCFISTF AAAPLVPVIR
101: DNLDLTKTDI GNAGVASVSG AIFSRLAMGA VCDLLGARYG TAFSLMLTAP AVFSMSFVAD AGSYLAVRFM IGFCLATFVS CQYWTSVMFT GKIIGLVNGC
201: AGGWGDMGGG VTQLLMPMVF HVIKLTGATP FTAWRFAFFI PGILQIVMGI LVLTLGQDLP DGNLSTLQKS GQVSKDKFSK VFWFAVKNYR TWILFMLYGF
301: SMGVELTINN VISGYFYDRF NLTLHTAGII AASFGMANFF ARPFGGYASD VAARLFGMRG RLWILWILQT VGALFCIWLG RASSLPIAIL AMMLFSMGTQ
401: AACGALFGVA PFVSRRSLGL ISGLTGAGGN FGSGVTQLLF FSSSRFSTAE GLSLMGVMAV VCSLPVAFIH FPQWGSMFLR PSQDGEKSKE EHYYGAEWTE
501: EEKSLGLHEG SIKFAENSRS ERGRKAMLAD IPTPETGSPA HV

Arabidopsis Description

NRT2.6High affinity nitrate transporter 2.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXH0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.