Factsheet for Bra018656.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

cytosol 1
golgi 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000613.1-P
Bra022511.1-P
Bra033790.1-P
Bra037934.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G08090.1	Bra000613.1-P	AT5G50200.1	17012411
AT1G08090.1	Bra022511.1-P	AT5G50200.1	17012411
AT1G08090.1	Bra033790.1-P	AT5G50200.1	17012411
AT1G08090.1	Bra037934.1-P	AT5G50200.1	17012411

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93592	Canola	golgi, peroxisome, plasma membrane	94.05	99.57
Bra018655.1-P	Field mustard	golgi, peroxisome, plasma membrane	91.99	89.42
Bra031610.1-P	Field mustard	golgi, peroxisome, plasma membrane	96.92	89.22
Bra030713.1-P	Field mustard	golgi, peroxisome, plasma membrane	95.89	88.11
AT1G08090.1	Thale cress	cytosol, peroxisome, plasma membrane	95.28	87.55
Bra031611.1-P	Field mustard	golgi, peroxisome, plasma membrane	85.22	82.02
AT1G08100.1	Thale cress	cytosol, peroxisome, plasma membrane	85.01	79.31
Bra002453.1-P	Field mustard	golgi, peroxisome, plasma membrane, plastid	80.9	74.76
VIT_06s0061g00320.t01	Wine grape	peroxisome	81.11	74.53
KRH22855	Soybean	peroxisome	80.29	73.77
KRH30604	Soybean	peroxisome	79.88	73.4
KRH26509	Soybean	peroxisome	79.88	73.4
Bra034142.1-P	Field mustard	plasma membrane	22.59	71.43
HORVU6Hr1G005750.1	Barley	cytosol, plastid	14.58	70.3
GSMUA_Achr8P14230_001	Banana	golgi, peroxisome, plasma membrane	70.84	68.73
GSMUA_Achr11P...	Banana	cytosol	66.94	67.63
TraesCS6A01G030900.1	Wheat	plasma membrane	69.4	66.67
Zm00001d054057_P001	Maize	extracellular	71.66	66.6
TraesCS6D01G035900.1	Wheat	plasma membrane	69.2	66.47
Zm00001d054060_P001	Maize	plastid	71.46	66.41
TraesCS6A01G031000.1	Wheat	plasma membrane	68.99	66.27
HORVU6Hr1G005590.1	Barley	plasma membrane	68.99	66.27
Os02t0112600-01	Rice	golgi, plasma membrane, plastid	72.48	66.23
Os02t0112100-01	Rice	golgi, plasma membrane, plastid	72.48	66.23
TraesCS6A01G030700.1	Wheat	plastid	68.79	66.08
TraesCS6B01G044300.1	Wheat	plasma membrane	68.79	66.08
TraesCS6A01G031100.1	Wheat	plastid	68.58	65.88
TraesCS6B01G044200.1	Wheat	plasma membrane	68.58	65.88
TraesCS6B01G044100.1	Wheat	plastid	68.58	65.88
TraesCS6A01G030800.1	Wheat	plasma membrane	68.38	65.68
TraesCS6D01G035800.1	Wheat	plasma membrane	68.38	65.68
TraesCS6D01G035700.1	Wheat	plasma membrane	68.38	65.68
TraesCS6A01G031200.1	Wheat	plasma membrane	68.58	65.62
EES04351	Sorghum	golgi, peroxisome, plasma membrane	70.84	65.46
EES06135	Sorghum	golgi, peroxisome, plasma membrane	70.84	65.46
TraesCS6B01G044000.1	Wheat	plasma membrane	68.38	65.42
TraesCS6D01G035600.1	Wheat	plasma membrane	68.17	65.23
KRH25078	Soybean	peroxisome, plasma membrane, plastid, vacuole	59.14	64.57
Bra037626.1-P	Field mustard	peroxisome	71.05	63.37
VIT_06s0061g00310.t01	Wine grape	plasma membrane	32.24	63.05
HORVU6Hr1G005600.2	Barley	endoplasmic reticulum	65.71	62.87
Bra037625.1-P	Field mustard	peroxisome	69.2	62.29
Bra038302.1-P	Field mustard	peroxisome	68.79	62.27
Bra002451.1-P	Field mustard	golgi, peroxisome, plasma membrane	68.17	61.94
Bra038301.1-P	Field mustard	golgi, peroxisome, plasma membrane	68.58	61.51
HORVU6Hr1G005580.1	Barley	plastid	68.79	61.47
TraesCS2A01G074800.1	Wheat	plasma membrane	62.83	60.96
TraesCS6D01G037800.1	Wheat	plasma membrane	63.24	60.75
TraesCS2D01G073500.1	Wheat	plasma membrane	62.01	60.52
Bra020230.1-P	Field mustard	peroxisome	60.57	60.45
TraesCS6B01G046600.1	Wheat	plasma membrane	63.04	60.31
HORVU6Hr1G005780.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	57.08	60.3
TraesCS6B01G046500.1	Wheat	plasma membrane	62.42	59.96
TraesCS6A01G032900.1	Wheat	golgi, plasma membrane, vacuole	62.63	59.92
TraesCS6A01G033000.1	Wheat	plasma membrane	62.63	59.92
TraesCS6A01G032400.1	Wheat	plastid	62.42	59.84
TraesCS6D01G037200.1	Wheat	golgi, plasma membrane, plastid	62.42	59.84
TraesCS6D01G037900.1	Wheat	plasma membrane	62.42	59.73
TraesCS6D01G037300.1	Wheat	golgi, plasma membrane, plastid	62.22	59.65
TraesCS6A01G032500.1	Wheat	plastid	62.22	59.65
TraesCS6D01G038000.1	Wheat	plasma membrane	62.01	59.57
TraesCS6A01G032800.1	Wheat	plasma membrane	62.01	59.57
HORVU6Hr1G005770.1	Barley	plasma membrane	62.22	59.53
TraesCS6D01G038100.1	Wheat	golgi, plasma membrane, vacuole	62.22	59.53
TraesCS6B01G045700.1	Wheat	plastid	61.81	59.49
TraesCS6B01G044400.1	Wheat	plastid	68.99	59.47
TraesCS6B01G045600.1	Wheat	golgi, plasma membrane, vacuole	62.01	59.45
TraesCS6D01G038200.1	Wheat	plasma membrane	62.01	59.45
TraesCS6A01G033100.1	Wheat	plasma membrane	62.01	59.45
EES04350	Sorghum	plastid	65.09	59.25
TraesCS6B01G046700.1	Wheat	plasma membrane	61.81	59.25
TraesCS6D01G038300.1	Wheat	plasma membrane	61.6	59.06
HORVU6Hr1G005930.1	Barley	plasma membrane	61.6	59.06
Zm00001d014976_P001	Maize	plasma membrane	62.83	58.62
TraesCS6A01G033200.1	Wheat	plasma membrane	60.99	58.46
TraesCS6B01G044500.1	Wheat	plastid	58.11	58.35
HORVU6Hr1G005570.1	Barley	golgi, plasma membrane	31.83	56.99
HORVU6Hr1G005720.1	Barley	extracellular	43.74	56.2
Bra016747.1-P	Field mustard	plasma membrane	50.31	42.61
Bra023475.1-P	Field mustard	plastid	41.27	41.53

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.10	MapMan:25.1.3.1	EnsemblPlantsGene:Bra018656	EnsemblPlants:Bra018656.1	EnsemblPlants:Bra018656.1-P
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:IPR020846	UniProt:M4DQ63	InterPro:MFS	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF07690
PANTHER:PTHR23515	PANTHER:PTHR23515:SF3	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000253EE4D	SEG:seg

Description

AT1G08090 (E=9e-219) ATNRT2:1, NRT2, NRT2;1AT, ACH1, LIN1, ATNRT2.1, NRT2.1 | ATNRT2:1 (NITRATE TRANSPORTER 2:1); nitrate transmembrane transporter

Coordinates

chrA06:+:2786900..2789045

Molecular Weight (calculated)

53222.7 Da

IEP (calculated)

9.045

GRAVY (calculated)

0.281

Length

487 amino acids

Sequence
(BLAST)

001: MGDSTGEPGS SMHGVTGREQ TFAFSVASPI VPTDKTAKFD LPVDSEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVHD AGGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGATA FTAWRIAFFV PGWLHIIMGV LVLNLGQDLP DGNRSALEKK GEVAKDKFGK IMWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGII AASFGMANFF ARPAGGYASD LAAKYFGMRG RLWALWIIQT AGGLFCVWLG RANTLVTAVV AMILFSLGAQ AACGATFAIV
401: VSRRALVACT LPVTLIHFPQ WGSMFLPPST DPVKGTEEHY YASEWNEQEK EKNMHQGSLR FAKNAKSEGG RRVRSAATPP ENTPNNV

Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)

001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV

Arabidopsis Description

NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.