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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 1
  • plasma membrane 2
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93591 Canola golgi, peroxisome, plasma membrane 92.02 99.35
Bra018656.1-P Field mustard golgi, peroxisome, plasma membrane 89.42 91.99
Bra031610.1-P Field mustard golgi, peroxisome, plasma membrane 96.21 91.12
Bra030713.1-P Field mustard golgi, peroxisome, plasma membrane 95.21 90.0
Bra031611.1-P Field mustard golgi, peroxisome, plasma membrane 84.23 83.4
Bra002453.1-P Field mustard golgi, peroxisome, plasma membrane, plastid 81.84 77.8
VIT_06s0061g00310.t01 Wine grape plasma membrane 38.52 77.51
VIT_06s0061g00320.t01 Wine grape peroxisome 80.84 76.42
KRH30604 Soybean peroxisome 80.24 75.85
KRH22855 Soybean peroxisome 80.24 75.85
KRH26509 Soybean peroxisome 79.84 75.47
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 70.66 70.52
HORVU6Hr1G005750.1 Barley cytosol, plastid 14.17 70.3
GSMUA_Achr11P... Banana cytosol 66.87 69.5
TraesCS6A01G030900.1 Wheat plasma membrane 68.86 68.05
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 36.93 68.01
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 60.48 67.94
Zm00001d054057_P001 Maize extracellular 70.86 67.75
TraesCS6D01G035900.1 Wheat plasma membrane 68.46 67.65
TraesCS6A01G031000.1 Wheat plasma membrane 68.46 67.65
HORVU6Hr1G005590.1 Barley plasma membrane 68.46 67.65
Zm00001d054060_P001 Maize plastid 70.66 67.56
TraesCS6A01G030700.1 Wheat plastid 68.26 67.46
TraesCS6B01G044300.1 Wheat plasma membrane 68.26 67.46
TraesCS6B01G044100.1 Wheat plastid 68.06 67.26
TraesCS6A01G031100.1 Wheat plastid 68.06 67.26
TraesCS6B01G044200.1 Wheat plasma membrane 67.86 67.06
TraesCS6D01G035700.1 Wheat plasma membrane 67.86 67.06
TraesCS6D01G035800.1 Wheat plasma membrane 67.86 67.06
TraesCS6A01G030800.1 Wheat plasma membrane 67.86 67.06
TraesCS6B01G044000.1 Wheat plasma membrane 68.06 66.99
TraesCS6A01G031200.1 Wheat plasma membrane 68.06 66.99
Os02t0112100-01 Rice golgi, plasma membrane, plastid 71.26 66.98
Os02t0112600-01 Rice golgi, plasma membrane, plastid 71.26 66.98
TraesCS6D01G035600.1 Wheat plasma membrane 67.86 66.8
EES04351 Sorghum golgi, peroxisome, plasma membrane 70.06 66.6
EES06135 Sorghum golgi, peroxisome, plasma membrane 70.06 66.6
Bra037626.1-P Field mustard peroxisome 70.46 64.65
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 65.47 64.44
Bra037625.1-P Field mustard peroxisome 68.66 63.59
Bra038302.1-P Field mustard peroxisome 68.26 63.57
Bra002451.1-P Field mustard golgi, peroxisome, plasma membrane 67.86 63.43
Bra020230.1-P Field mustard peroxisome 61.48 63.11
Bra038301.1-P Field mustard golgi, peroxisome, plasma membrane 68.26 62.98
HORVU6Hr1G005580.1 Barley plastid 68.26 62.75
TraesCS2A01G074800.1 Wheat plasma membrane 61.08 60.96
TraesCS6D01G037800.1 Wheat plasma membrane 61.68 60.95
TraesCS6B01G046600.1 Wheat plasma membrane 61.88 60.9
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 61.68 60.83
TraesCS6A01G032400.1 Wheat plastid 61.68 60.83
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 55.89 60.74
TraesCS6B01G044400.1 Wheat plastid 68.46 60.71
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 61.48 60.63
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 61.48 60.63
TraesCS6A01G032500.1 Wheat plastid 61.48 60.63
TraesCS6B01G046500.1 Wheat plasma membrane 61.28 60.55
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 61.48 60.51
TraesCS6D01G037900.1 Wheat plasma membrane 61.48 60.51
TraesCS6B01G045700.1 Wheat plastid 61.08 60.47
EES04350 Sorghum plastid 64.47 60.37
TraesCS6A01G032800.1 Wheat plasma membrane 61.08 60.35
TraesCS2D01G073500.1 Wheat plasma membrane 60.08 60.32
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 61.28 60.31
TraesCS6A01G033000.1 Wheat plasma membrane 61.28 60.31
TraesCS6D01G038200.1 Wheat plasma membrane 61.08 60.24
Zm00001d014976_P001 Maize plasma membrane 62.67 60.15
HORVU6Hr1G005770.1 Barley plasma membrane 61.08 60.12
TraesCS6B01G046700.1 Wheat plasma membrane 60.88 60.04
TraesCS6A01G033100.1 Wheat plasma membrane 60.88 60.04
TraesCS6B01G044500.1 Wheat plastid 58.08 60.0
TraesCS6D01G038000.1 Wheat plasma membrane 60.68 59.96
HORVU6Hr1G005930.1 Barley plasma membrane 60.68 59.84
TraesCS6D01G038300.1 Wheat plasma membrane 60.68 59.84
TraesCS6A01G033200.1 Wheat plasma membrane 60.28 59.45
HORVU6Hr1G005720.1 Barley extracellular 43.71 57.78
Bra034142.1-P Field mustard plasma membrane 16.97 55.19
Bra023475.1-P Field mustard plastid 41.32 42.77
Bra016747.1-P Field mustard plasma membrane 48.5 42.26
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.10MapMan:25.1.3.1EnsemblPlantsGene:Bra018655EnsemblPlants:Bra018655.1EnsemblPlants:Bra018655.1-P
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0055085
InterPro:IPR020846UniProt:M4DQ62InterPro:MFSInterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF07690
PANTHER:PTHR23515PANTHER:PTHR23515:SF3SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000253EE4ESEG:seg
Description
AT1G08090 (E=4e-159) ATNRT2:1, NRT2, NRT2;1AT, ACH1, LIN1, ATNRT2.1, NRT2.1 | ATNRT2:1 (NITRATE TRANSPORTER 2:1); nitrate transmembrane transporter
Coordinates
chrA06:-:2790414..2792217
Molecular Weight (calculated)
54451.1 Da
IEP (calculated)
8.725
GRAVY (calculated)
0.240
Length
501 amino acids
Sequence
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ TFAFSVASPI VPTDKTAKFD LPVDSEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TGFSMSFVHD AGGFITVRFM IGFCLATFVS CQCWMSTMFN SQIMGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGQDL PDGNRSALEK KGEVAKDKFG KIMWYAVTNY RTWIFVLLYG YSMGVELSTD NVIAEYFFDR FHLKLHTAGI IAACFGMANF
301: FARPAGGYAS DLAARYFGMR GRLWALWIIQ TLGGLFCVWL GRANTLVTAV VAMILFSLGA QAACGATFAI VPFVSRRALG IISGLTGAGG NFGSGLTQLI
401: FFSTSRFTTE QGITWMGVMI VACTLPVTLI HFPQWGSMFL PPSKDPVKGT EEHYYASEWN EQEKEKNMHQ GSLRFAENAK SEGGRRVRSG ATPPGNTPNN
501: V
Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.