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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane, peroxisome

Predictor Summary:
  • cytosol 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:cytosol, golgi, peroxisome
BaCelLo:cytosol
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93592 Canola golgi, peroxisome, plasma membrane 97.63 98.48
CDY22704 Canola cytosol, peroxisome, plasma membrane 95.91 96.11
CDY32821 Canola cytosol, peroxisome, plasma membrane 95.91 95.91
Bra018655.1-P Field mustard golgi, peroxisome, plasma membrane 99.35 92.02
CDY06298 Canola golgi, peroxisome, plasma membrane 81.68 90.02
CDY72274 Canola plasma membrane 59.48 78.19
CDY70994 Canola golgi, plasma membrane 59.27 77.9
CDY22703 Canola golgi, peroxisome, plasma membrane 83.84 77.49
CDY06299 Canola golgi, peroxisome, plasma membrane 84.27 77.27
VIT_06s0061g00320.t01 Wine grape peroxisome 82.11 71.89
KRH22855 Soybean peroxisome 81.03 70.94
KRH30604 Soybean peroxisome 80.6 70.57
KRH26509 Soybean peroxisome 80.6 70.57
HORVU6Hr1G005750.1 Barley cytosol, plastid 15.3 70.3
VIT_06s0061g00310.t01 Wine grape plasma membrane 35.78 66.67
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 71.77 66.33
CDY68730 Canola endoplasmic reticulum, plasma membrane 55.82 65.9
GSMUA_Achr11P... Banana cytosol 67.46 64.94
TraesCS6A01G030900.1 Wheat plasma membrane 70.04 64.1
Zm00001d054057_P001 Maize extracellular 72.2 63.93
Zm00001d054060_P001 Maize plastid 71.98 63.74
HORVU6Hr1G005590.1 Barley plasma membrane 69.61 63.71
TraesCS6A01G031000.1 Wheat plasma membrane 69.61 63.71
TraesCS6D01G035900.1 Wheat plasma membrane 69.61 63.71
TraesCS6A01G030700.1 Wheat plastid 69.4 63.51
TraesCS6B01G044300.1 Wheat plasma membrane 69.4 63.51
TraesCS6B01G044100.1 Wheat plastid 69.18 63.31
TraesCS6A01G031100.1 Wheat plastid 69.18 63.31
TraesCS6A01G031200.1 Wheat plasma membrane 69.4 63.26
TraesCS6A01G030800.1 Wheat plasma membrane 68.97 63.12
TraesCS6B01G044200.1 Wheat plasma membrane 68.97 63.12
TraesCS6D01G035700.1 Wheat plasma membrane 68.97 63.12
TraesCS6D01G035800.1 Wheat plasma membrane 68.97 63.12
TraesCS6B01G044000.1 Wheat plasma membrane 69.18 63.06
Os02t0112600-01 Rice golgi, plasma membrane, plastid 72.41 63.04
Os02t0112100-01 Rice golgi, plasma membrane, plastid 72.41 63.04
TraesCS6D01G035600.1 Wheat plasma membrane 68.97 62.87
EES04351 Sorghum golgi, peroxisome, plasma membrane 71.34 62.81
EES06135 Sorghum golgi, peroxisome, plasma membrane 71.34 62.81
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 59.7 62.11
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 66.38 60.51
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 34.91 59.56
HORVU6Hr1G005580.1 Barley plastid 69.4 59.08
CDY26984 Canola plasma membrane 57.76 58.77
TraesCS2A01G074800.1 Wheat plasma membrane 62.72 57.97
TraesCS6D01G037800.1 Wheat plasma membrane 63.15 57.79
TraesCS2D01G073500.1 Wheat plasma membrane 61.85 57.52
CDY69111 Canola peroxisome 59.48 57.5
TraesCS6B01G046500.1 Wheat plasma membrane 62.72 57.4
TraesCS6B01G046600.1 Wheat plasma membrane 62.93 57.37
CDY50324 Canola plasma membrane 59.27 57.29
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 56.9 57.27
TraesCS6A01G032800.1 Wheat plasma membrane 62.5 57.2
TraesCS6B01G044400.1 Wheat plastid 69.61 57.17
TraesCS6D01G038200.1 Wheat plasma membrane 62.5 57.09
TraesCS6A01G033000.1 Wheat plasma membrane 62.5 56.97
TraesCS6D01G037900.1 Wheat plasma membrane 62.5 56.97
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 62.5 56.97
TraesCS6A01G033100.1 Wheat plasma membrane 62.28 56.89
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 62.28 56.89
TraesCS6B01G046700.1 Wheat plasma membrane 62.28 56.89
TraesCS6A01G032400.1 Wheat plastid 62.28 56.89
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 62.28 56.78
HORVU6Hr1G005930.1 Barley plasma membrane 62.07 56.69
TraesCS6D01G038300.1 Wheat plasma membrane 62.07 56.69
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 62.07 56.69
TraesCS6A01G032500.1 Wheat plastid 62.07 56.69
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 62.07 56.69
HORVU6Hr1G005770.1 Barley plasma membrane 62.07 56.58
TraesCS6B01G045700.1 Wheat plastid 61.64 56.52
EES04350 Sorghum plastid 65.09 56.45
TraesCS6D01G038000.1 Wheat plasma membrane 61.64 56.41
TraesCS6A01G033200.1 Wheat plasma membrane 61.64 56.3
Zm00001d014976_P001 Maize plasma membrane 63.15 56.13
TraesCS6B01G044500.1 Wheat plastid 58.41 55.88
CDY21075 Canola plasma membrane 56.47 52.51
CDY34599 Canola plasma membrane 56.25 52.41
HORVU6Hr1G005720.1 Barley extracellular 42.67 52.24
CDY31024 Canola endoplasmic reticulum, plasma membrane 17.03 51.3
CDY53125 Canola plastid 19.61 49.46
CDY31023 Canola endoplasmic reticulum, extracellular 8.84 48.81
CDX99169 Canola cytosol 7.33 45.33
CDX85593 Canola golgi, peroxisome, plasma membrane, plastid 42.24 40.5
CDX91044 Canola golgi, peroxisome, plasma membrane, plastid 41.59 38.45
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.10MapMan:25.1.3.1GO:A0A078DWE3EnsemblPlants:CDX93591ProteinID:CDX93591
ProteinID:CDX93591.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00156271001InterPro:IPR020846InterPro:MFSInterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF07690PANTHER:PTHR23515PANTHER:PTHR23515:SF3SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EEB441
SEG:seg:::::
Description
BnaA06g04570D
Coordinates
chrLK031876:+:843332..845379
Molecular Weight (calculated)
50668.5 Da
IEP (calculated)
8.804
GRAVY (calculated)
0.230
Length
464 amino acids
Sequence
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ TFAFSVASPI VPTDKTAKFD LPVDSEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVHD AGGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGQDL PDGNRSALEK KGEVAKDKFG KIMWYAVTNY RTWIFVLLYG YSMGVELSTD NVIAEYFFDR FHLKLHTAGI IAACFGMANF
301: FARPAGGYAS DLAARYFGMR GRLWALWIIQ TLGGLFCVWL GRANTLVTAV VAMILFSLGA QAACGATFAI VPFVSRRALG IISVACTLPV TLIHFPQWGS
401: MFLPPSKDPV KGTEEHYYAS EWNEQEKEKN MHQGSLRFAE NAKSEGGRRV RSGATPPGNT PNNV
Best Arabidopsis Sequence Match ( AT1G08090.1 )
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ SFAFSVQSPI VHTDKTAKFD LPVDTEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSD AAGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: ITQLLMPIVY EIIRRCGSTA FTAWRIAFFV PGWLHIIMGI LVLNLGQDLP DGNRATLEKA GEVAKDKFGK ILWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGLI AACFGMANFF ARPAGGYASD FAAKYFGMRG RLWTLWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSMGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGAGGN FGSGLTQLLF FSTSHFTTEQ GLTWMGVMIV ACTLPVTLVH FPQWGSMFLP PSTDPVKGTE AHYYGSEWNE QEKQKNMHQG
501: SLRFAENAKS EGGRRVRSAA TPPENTPNNV
Arabidopsis Description
NRT2.1High-affinity nitrate transporter 2.1 [Source:UniProtKB/Swiss-Prot;Acc:O82811]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.