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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:golgi, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY22704 Canola cytosol, peroxisome, plasma membrane 90.5 82.29
CDX93592 Canola golgi, peroxisome, plasma membrane 89.31 81.74
CDX93591 Canola golgi, peroxisome, plasma membrane 90.02 81.68
CDY32821 Canola cytosol, peroxisome, plasma membrane 87.89 79.74
CDY22703 Canola golgi, peroxisome, plasma membrane 88.6 74.3
CDY06299 Canola golgi, peroxisome, plasma membrane 87.89 73.12
HORVU6Hr1G005750.1 Barley cytosol, plastid 16.86 70.3
CDY70994 Canola golgi, plasma membrane 57.48 68.56
CDY72274 Canola plasma membrane 54.87 65.44
VIT_06s0061g00320.t01 Wine grape peroxisome 81.95 65.09
CDY31024 Canola endoplasmic reticulum, plasma membrane 23.75 64.94
KRH22855 Soybean peroxisome 81.71 64.91
KRH30604 Soybean peroxisome 81.47 64.72
KRH26509 Soybean peroxisome 81.47 64.72
GSMUA_Achr8P14230_001 Banana golgi, peroxisome, plasma membrane 72.68 60.96
Zm00001d054057_P001 Maize extracellular 75.3 60.5
KRH25078 Soybean peroxisome, plasma membrane, plastid, vacuole 63.9 60.31
Zm00001d054060_P001 Maize plastid 75.06 60.31
CDY68730 Canola endoplasmic reticulum, plasma membrane 55.82 59.8
EES04351 Sorghum golgi, peroxisome, plasma membrane 74.35 59.39
EES06135 Sorghum golgi, peroxisome, plasma membrane 74.35 59.39
TraesCS6A01G030900.1 Wheat plasma membrane 71.5 59.37
GSMUA_Achr11P... Banana cytosol 67.7 59.13
Os02t0112600-01 Rice golgi, plasma membrane, plastid 74.82 59.1
Os02t0112100-01 Rice golgi, plasma membrane, plastid 74.82 59.1
TraesCS6A01G030700.1 Wheat plastid 71.02 58.97
TraesCS6D01G035900.1 Wheat plasma membrane 71.02 58.97
HORVU6Hr1G005590.1 Barley plasma membrane 71.02 58.97
TraesCS6A01G031000.1 Wheat plasma membrane 70.78 58.78
TraesCS6D01G035700.1 Wheat plasma membrane 70.78 58.78
TraesCS6B01G044300.1 Wheat plasma membrane 70.78 58.78
TraesCS6B01G044200.1 Wheat plasma membrane 70.78 58.78
TraesCS6A01G031100.1 Wheat plastid 70.55 58.58
TraesCS6A01G030800.1 Wheat plasma membrane 70.55 58.58
TraesCS6D01G035800.1 Wheat plasma membrane 70.55 58.58
TraesCS6B01G044100.1 Wheat plastid 70.55 58.58
TraesCS6A01G031200.1 Wheat plasma membrane 70.78 58.55
TraesCS6D01G035600.1 Wheat plasma membrane 70.55 58.35
TraesCS6B01G044000.1 Wheat plasma membrane 70.55 58.35
HORVU6Hr1G005600.2 Barley endoplasmic reticulum 67.93 56.19
TraesCS2A01G074800.1 Wheat plasma membrane 65.8 55.18
TraesCS2D01G073500.1 Wheat plasma membrane 65.32 55.11
HORVU6Hr1G005580.1 Barley plastid 70.78 54.68
CDY26984 Canola plasma membrane 58.43 53.95
CDY50324 Canola plasma membrane 60.81 53.33
TraesCS6B01G046600.1 Wheat plasma membrane 64.37 53.24
TraesCS6D01G038200.1 Wheat plasma membrane 63.9 52.95
TraesCS6B01G046700.1 Wheat plasma membrane 63.9 52.95
TraesCS6B01G044400.1 Wheat plastid 71.02 52.92
CDY69111 Canola peroxisome 60.33 52.92
TraesCS6A01G032900.1 Wheat golgi, plasma membrane, vacuole 63.9 52.85
TraesCS6D01G038300.1 Wheat plasma membrane 63.66 52.76
TraesCS6A01G033100.1 Wheat plasma membrane 63.66 52.76
TraesCS6A01G033000.1 Wheat plasma membrane 63.66 52.65
TraesCS6D01G038100.1 Wheat golgi, plasma membrane, vacuole 63.66 52.65
TraesCS6D01G037900.1 Wheat plasma membrane 63.66 52.65
HORVU6Hr1G005930.1 Barley plasma membrane 63.42 52.56
TraesCS6D01G038000.1 Wheat plasma membrane 63.18 52.47
TraesCS6B01G046500.1 Wheat plasma membrane 63.18 52.47
TraesCS6D01G037800.1 Wheat plasma membrane 63.18 52.47
HORVU6Hr1G005770.1 Barley plasma membrane 63.42 52.46
TraesCS6A01G032400.1 Wheat plastid 63.18 52.36
TraesCS6D01G037200.1 Wheat golgi, plasma membrane, plastid 63.18 52.36
TraesCS6A01G033200.1 Wheat plasma membrane 63.18 52.36
TraesCS6A01G032500.1 Wheat plastid 63.18 52.36
Zm00001d014976_P001 Maize plasma membrane 64.85 52.3
HORVU6Hr1G005780.1 Barley endoplasmic reticulum, plasma membrane, vacuole 57.24 52.28
TraesCS6B01G045700.1 Wheat plastid 62.71 52.17
TraesCS6D01G037300.1 Wheat golgi, plasma membrane, plastid 62.95 52.17
EES04350 Sorghum plastid 66.27 52.15
TraesCS6A01G032800.1 Wheat plasma membrane 62.71 52.07
TraesCS6B01G045600.1 Wheat golgi, plasma membrane, vacuole 62.71 51.97
TraesCS6B01G044500.1 Wheat plastid 58.19 50.52
CDY34599 Canola plasma membrane 57.48 48.59
CDY21075 Canola plasma membrane 57.48 48.5
HORVU6Hr1G005720.1 Barley extracellular 41.57 46.17
HORVU6Hr1G005570.1 Barley golgi, plasma membrane 28.5 44.12
VIT_06s0061g00310.t01 Wine grape plasma membrane 25.65 43.37
CDX85593 Canola golgi, peroxisome, plasma membrane, plastid 46.32 40.29
CDY53125 Canola plastid 16.86 38.59
CDX91044 Canola golgi, peroxisome, plasma membrane, plastid 45.84 38.45
CDX99169 Canola cytosol 0.48 2.67
CDY31023 Canola endoplasmic reticulum, extracellular 0.48 2.38
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.10MapMan:25.1.3.1GO:A0A078F3I9EnsemblPlants:CDY06298ProteinID:CDY06298
ProteinID:CDY06298.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00122222001InterPro:IPR020846InterPro:MFSInterPro:MFS_domInterPro:MFS_trans_sf
PFAM:PF07690PANTHER:PTHR23515PANTHER:PTHR23515:SF3SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EDB813
SEG:seg:::::
Description
BnaA09g49050D
Coordinates
chrLK031968:-:678852..680384
Molecular Weight (calculated)
45574.0 Da
IEP (calculated)
9.083
GRAVY (calculated)
0.552
Length
421 amino acids
Sequence
(BLAST)
001: MGDSTGEPGS SMHGVTGREQ TFAFSVASPI VPTDKTAKFD LPVDSEHKAT VFKLFSFAKP HMRTFHLSWI SFSTCFVSTF AAAPLVPIIR ENLNLTKQDI
101: GNAGVASVSG SIFSRLVMGA VCDLLGPRYG CAFLVMLSAP TVFSMSFVSG AGGFITVRFM IGFCLATFVS CQYWMSTMFN SQIIGLVNGT AAGWGNMGGG
201: VTQLLMPIVY EIIRRCGATA FTAWRLAFFV PGWLHIIMGV LVLNLGQDLP DGNRSALEKK GEVAKDKFGK IMWYAVTNYR TWIFVLLYGY SMGVELSTDN
301: VIAEYFFDRF HLKLHTAGII AACFGMANFF ARPAGGYASD LAAKYFGMRG RLWALWIIQT AGGLFCVWLG RANTLVTAVV AMVLFSLGAQ AACGATFAIV
401: PFVSRRALGI ISGLTGISEM F
Best Arabidopsis Sequence Match ( AT1G08100.1 )
(BLAST)
001: MGSTDEPGSS MHGVTGREQS YAFSVDGSEP TNTKKKYNLP VDAEDKATVF KLFSFAKPHM RTFHLSWISF STCFVSTFAA APLIPIIREN LNLTKHDIGN
101: AGVASVSGSI FSRLVMGAVC DLLGPRYGCA FLVMLSAPTV FSMSFVSDAA GFITVRFMIG FCLATFVSCQ YWMSTMFNSQ IIGLVNGTAA GWGNMGGGIT
201: QLLMPIVYEI IRRCGSTAFT AWRIAFFVPG WLHIIMGILV LTLGQDLPGG NRAAMEKAGE VAKDKFGKIL WYAVTNYRTW IFVLLYGYSM GVELSTDNVI
301: AEYFFDRFHL KLHTAGIIAA CFGMANFFAR PAGGWASDIA AKRFGMRGRL WTLWIIQTSG GLFCVWLGRA NTLVTAVVSM VLFSLGAQAA CGATFAIVPF
401: VSRRALGIIS GLTGAGGNFG SGLTQLVFFS TSRFTTEEGL TWMGVMIVAC TLPVTLIHFP QWGSMFFPPS NDSVDATEHY YVGEYSKEEQ QIGMHLKSKL
501: FADGAKTEGG SSVHKGNATN NA
Arabidopsis Description
NRT2.2NRT2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7F7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.