Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31023 | Canola | endoplasmic reticulum, extracellular | 94.67 | 84.52 |
| CDY53125 | Canola | plastid | 53.33 | 21.74 |
| VIT_06s0061g00310.t01 | Wine grape | plasma membrane | 56.0 | 16.87 |
| HORVU6Hr1G005570.1 | Barley | golgi, plasma membrane | 49.33 | 13.6 |
| Bra038301.1-P | Field mustard | golgi, peroxisome, plasma membrane | 97.33 | 13.44 |
| HORVU6Hr1G005720.1 | Barley | extracellular | 53.33 | 10.55 |
| CDY72274 | Canola | plasma membrane | 46.67 | 9.92 |
| CDY68730 | Canola | endoplasmic reticulum, plasma membrane | 50.67 | 9.67 |
| CDY70994 | Canola | golgi, plasma membrane | 45.33 | 9.63 |
| CDY69111 | Canola | peroxisome | 60.0 | 9.38 |
| CDY50324 | Canola | plasma membrane | 57.33 | 8.96 |
| HORVU6Hr1G005780.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 54.67 | 8.89 |
| CDY26984 | Canola | plasma membrane | 52.0 | 8.55 |
| GSMUA_Achr11P... | Banana | cytosol | 53.33 | 8.3 |
| TraesCS6D01G037800.1 | Wheat | plasma membrane | 56.0 | 8.28 |
| TraesCS6A01G032800.1 | Wheat | plasma membrane | 54.67 | 8.09 |
| TraesCS6B01G046500.1 | Wheat | plasma membrane | 54.67 | 8.09 |
| TraesCS6B01G046600.1 | Wheat | plasma membrane | 54.67 | 8.06 |
| KRH30604 | Soybean | peroxisome | 56.0 | 7.92 |
| KRH22855 | Soybean | peroxisome | 56.0 | 7.92 |
| TraesCS6D01G037900.1 | Wheat | plasma membrane | 53.33 | 7.86 |
| TraesCS6A01G032900.1 | Wheat | golgi, plasma membrane, vacuole | 53.33 | 7.86 |
| KRH26509 | Soybean | peroxisome | 54.67 | 7.74 |
| VIT_06s0061g00320.t01 | Wine grape | peroxisome | 54.67 | 7.74 |
| TraesCS6A01G032400.1 | Wheat | plastid | 52.0 | 7.68 |
| TraesCS6B01G045600.1 | Wheat | golgi, plasma membrane, vacuole | 52.0 | 7.68 |
| TraesCS6D01G037200.1 | Wheat | golgi, plasma membrane, plastid | 52.0 | 7.68 |
| TraesCS6D01G037300.1 | Wheat | golgi, plasma membrane, plastid | 52.0 | 7.68 |
| HORVU6Hr1G005770.1 | Barley | plasma membrane | 52.0 | 7.66 |
| TraesCS6B01G044500.1 | Wheat | plastid | 49.33 | 7.63 |
| CDY32821 | Canola | cytosol, peroxisome, plasma membrane | 46.67 | 7.54 |
| TraesCS6D01G038000.1 | Wheat | plasma membrane | 50.67 | 7.5 |
| TraesCS6D01G038300.1 | Wheat | plasma membrane | 50.67 | 7.48 |
| TraesCS6D01G038200.1 | Wheat | plasma membrane | 50.67 | 7.48 |
| HORVU6Hr1G005930.1 | Barley | plasma membrane | 50.67 | 7.48 |
| TraesCS6A01G033000.1 | Wheat | plasma membrane | 50.67 | 7.47 |
| TraesCS6D01G038100.1 | Wheat | golgi, plasma membrane, vacuole | 50.67 | 7.47 |
| GSMUA_Achr8P14230_001 | Banana | golgi, peroxisome, plasma membrane | 49.33 | 7.37 |
| CDY22704 | Canola | cytosol, peroxisome, plasma membrane | 45.33 | 7.34 |
| CDX93591 | Canola | golgi, peroxisome, plasma membrane | 45.33 | 7.33 |
| TraesCS6B01G044100.1 | Wheat | plastid | 49.33 | 7.3 |
| TraesCS6B01G044300.1 | Wheat | plasma membrane | 49.33 | 7.3 |
| TraesCS6D01G035700.1 | Wheat | plasma membrane | 49.33 | 7.3 |
| TraesCS6A01G031100.1 | Wheat | plastid | 49.33 | 7.3 |
| TraesCS6D01G035800.1 | Wheat | plasma membrane | 49.33 | 7.3 |
| HORVU6Hr1G005590.1 | Barley | plasma membrane | 49.33 | 7.3 |
| TraesCS6D01G035900.1 | Wheat | plasma membrane | 49.33 | 7.3 |
| TraesCS6A01G033100.1 | Wheat | plasma membrane | 49.33 | 7.28 |
| TraesCS6B01G046700.1 | Wheat | plasma membrane | 49.33 | 7.28 |
| TraesCS6A01G032500.1 | Wheat | plastid | 49.33 | 7.28 |
| TraesCS6B01G044000.1 | Wheat | plasma membrane | 49.33 | 7.27 |
| CDX93592 | Canola | golgi, peroxisome, plasma membrane | 44.0 | 7.17 |
| Os02t0112100-01 | Rice | golgi, plasma membrane, plastid | 50.67 | 7.13 |
| Os02t0112600-01 | Rice | golgi, plasma membrane, plastid | 50.67 | 7.13 |
| TraesCS6B01G045700.1 | Wheat | plastid | 48.0 | 7.11 |
| TraesCS6A01G031000.1 | Wheat | plasma membrane | 48.0 | 7.1 |
| TraesCS6A01G030800.1 | Wheat | plasma membrane | 48.0 | 7.1 |
| TraesCS6A01G030700.1 | Wheat | plastid | 48.0 | 7.1 |
| TraesCS6B01G044200.1 | Wheat | plasma membrane | 48.0 | 7.1 |
| TraesCS6A01G033200.1 | Wheat | plasma membrane | 48.0 | 7.09 |
| TraesCS6A01G031200.1 | Wheat | plasma membrane | 48.0 | 7.07 |
| HORVU6Hr1G005600.2 | Barley | endoplasmic reticulum | 48.0 | 7.07 |
| EES04350 | Sorghum | plastid | 49.33 | 6.92 |
| TraesCS6A01G030900.1 | Wheat | plasma membrane | 46.67 | 6.9 |
| TraesCS6D01G035600.1 | Wheat | plasma membrane | 46.67 | 6.88 |
| PGSC0003DMT400050654 | Potato | plasma membrane | 48.0 | 6.86 |
| HORVU6Hr1G005580.1 | Barley | plastid | 49.33 | 6.79 |
| Solyc11g069750.1.1 | Tomato | extracellular | 46.67 | 6.67 |
| TraesCS6B01G044400.1 | Wheat | plastid | 49.33 | 6.55 |
| Zm00001d014976_P001 | Maize | plasma membrane | 45.33 | 6.51 |
| Zm00001d054057_P001 | Maize | extracellular | 44.0 | 6.3 |
| Zm00001d054060_P001 | Maize | plastid | 44.0 | 6.3 |
| EES06135 | Sorghum | golgi, peroxisome, plasma membrane | 42.67 | 6.07 |
| EES04351 | Sorghum | golgi, peroxisome, plasma membrane | 42.67 | 6.07 |
| Solyc06g010250.2.1 | Tomato | plasma membrane | 40.0 | 6.02 |
| CDY21075 | Canola | plasma membrane | 40.0 | 6.01 |
| PGSC0003DMT400040689 | Potato | plasma membrane | 41.33 | 5.92 |
| CDY34599 | Canola | plasma membrane | 38.67 | 5.82 |
| CDY06299 | Canola | golgi, peroxisome, plasma membrane | 37.33 | 5.53 |
| TraesCS2D01G073500.1 | Wheat | plasma membrane | 36.0 | 5.41 |
| TraesCS2A01G074800.1 | Wheat | plasma membrane | 36.0 | 5.38 |
| CDY22703 | Canola | golgi, peroxisome, plasma membrane | 36.0 | 5.38 |
| KRH25078 | Soybean | peroxisome, plasma membrane, plastid, vacuole | 20.0 | 3.36 |
| CDX85593 | Canola | golgi, peroxisome, plasma membrane, plastid | 14.67 | 2.27 |
| CDX91044 | Canola | golgi, peroxisome, plasma membrane, plastid | 14.67 | 2.19 |
| CDY06298 | Canola | golgi, peroxisome, plasma membrane | 2.67 | 0.48 |
| CDY31024 | Canola | endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| HORVU6Hr1G005750.1 | Barley | cytosol, plastid | 0.0 | 0.0 |
| AT4G14358.1 | Thale cress | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX99169 | EnsemblPlantsGene:GSBRNA2T00107337001 | PANTHER:PTHR23515 | PANTHER:PTHR23515:SF3 | ProteinID:CDX99169 | ProteinID:CDX99169.1 |
| SignalP:SignalP-noTM | UniParc:UPI0004EE58E1 | MapMan:35.1 | : | : | : |
Description
BnaA06g18600D
Coordinates
chrLK031908:+:896203..896457
Molecular Weight (calculated)
8399.8 Da
IEP (calculated)
4.818
GRAVY (calculated)
-0.808
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MIFTLLVAMF LGPKSDSRTS KEEHYYVAEW TEEEKLQGLH EGSLKFAENS RSERGKKAAP DGTSTPLENE NPANV
001: MAHNHSNEDG SIGTSLHGVT AREQVFSFSV QEDVPSSQAV RTNDPTAKFA LPVDSEHRAK VFKPLSFAKP HMRAFHLGWI SFFTCFISTF AAAPLVPVIR
101: DNLDLTKTDI GNAGVASVSG AIFSRLAMGA VCDLLGARYG TAFSLMLTAP AVFSMSFVAD AGSYLAVRFM IGFCLATFVS CQYWTSVMFT GKIIGLVNGC
201: AGGWGDMGGG VTQLLMPMVF HVIKLTGATP FTAWRFAFFI PGILQIVMGI LVLTLGQDLP DGNLSTLQKS GQVSKDKFSK VFWFAVKNYR TWILFMLYGF
301: SMGVELTINN VISGYFYDRF NLTLHTAGII AASFGMANFF ARPFGGYASD VAARLFGMRG RLWILWILQT VGALFCIWLG RASSLPIAIL AMMLFSMGTQ
401: AACGALFGVA PFVSRRSLGL ISGLTGAGGN FGSGVTQLLF FSSSRFSTAE GLSLMGVMAV VCSLPVAFIH FPQWGSMFLR PSQDGEKSKE EHYYGAEWTE
501: EEKSLGLHEG SIKFAENSRS ERGRKAMLAD IPTPETGSPA HV
101: DNLDLTKTDI GNAGVASVSG AIFSRLAMGA VCDLLGARYG TAFSLMLTAP AVFSMSFVAD AGSYLAVRFM IGFCLATFVS CQYWTSVMFT GKIIGLVNGC
201: AGGWGDMGGG VTQLLMPMVF HVIKLTGATP FTAWRFAFFI PGILQIVMGI LVLTLGQDLP DGNLSTLQKS GQVSKDKFSK VFWFAVKNYR TWILFMLYGF
301: SMGVELTINN VISGYFYDRF NLTLHTAGII AASFGMANFF ARPFGGYASD VAARLFGMRG RLWILWILQT VGALFCIWLG RASSLPIAIL AMMLFSMGTQ
401: AACGALFGVA PFVSRRSLGL ISGLTGAGGN FGSGVTQLLF FSSSRFSTAE GLSLMGVMAV VCSLPVAFIH FPQWGSMFLR PSQDGEKSKE EHYYGAEWTE
501: EEKSLGLHEG SIKFAENSRS ERGRKAMLAD IPTPETGSPA HV
Arabidopsis Description
NRT2.6High affinity nitrate transporter 2.6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXH0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.